RNA–Protein interactions for RNA: ENST00000564342.5

NSMCE1-207, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-207ENST00000564342 TEX13BQ9BXU2 312 aa9.7□□□□□ -0.86
NSMCE1-207ENST00000564342 CRISPLD2Q9H0B8 497 aa9.7□□□□□ -0.86
NSMCE1-207ENST00000564342 CTNNA3Q9UI47 895 aa9.7□□□□□ -0.86
NSMCE1-207ENST00000564342 RIPK3Q9Y572 518 aa9.7□□□□□ -0.86
NSMCE1-207ENST00000564342 ALPK3Q96L96 1907 aa9.7□□□□□ -0.86
NSMCE1-207ENST00000564342 PDE4DIPQ5VU43 2346 aa9.7□□□□□ -0.86
NSMCE1-207ENST00000564342 BRCA2P51587 3418 aa9.69□□□□□ -0.86
NSMCE1-207ENST00000564342 B4E1Z4 1266 aa9.69□□□□□ -0.86
NSMCE1-207ENST00000564342 PLA2G6O60733 806 aa9.69□□□□□ -0.86
NSMCE1-207ENST00000564342 ZBED4O75132 1171 aa9.69□□□□□ -0.86
NSMCE1-207ENST00000564342 KDM4AO75164 1064 aa9.69□□□□□ -0.86
NSMCE1-207ENST00000564342 FDX1P10109 184 aa9.69□□□□□ -0.86
NSMCE1-207ENST00000564342 FCER1AP12319 257 aa9.69□□□□□ -0.86
NSMCE1-207ENST00000564342 CAPN2P17655 700 aa9.69□□□□□ -0.86
NSMCE1-207ENST00000564342 CCND3P30281 292 aaPredicted RBP9.69□□□□□ -0.86
NSMCE1-207ENST00000564342 STAT2P52630 851 aa9.69□□□□□ -0.86
NSMCE1-207ENST00000564342 OAZ1P54368 228 aa9.69□□□□□ -0.86
NSMCE1-207ENST00000564342 SNRNP48Q6IEG0 339 aaKnown RBP9.69□□□□□ -0.86
NSMCE1-207ENST00000564342 KCTD1Q719H9 257 aa9.69□□□□□ -0.86
NSMCE1-207ENST00000564342 CPXCR1Q8N123 301 aa9.69□□□□□ -0.86
NSMCE1-207ENST00000564342 CHURC1Q8WUH1 139 aa9.69□□□□□ -0.86
NSMCE1-207ENST00000564342 DCAF4Q8WV16 495 aa9.69□□□□□ -0.86
NSMCE1-207ENST00000564342 MMP19Q99542 508 aa9.69□□□□□ -0.86
NSMCE1-207ENST00000564342 ZKSCAN3Q9BRR0 538 aa9.69□□□□□ -0.86
NSMCE1-207ENST00000564342 RAVER2Q9HCJ3 691 aaKnown RBP9.69□□□□□ -0.86
NSMCE1-207ENST00000564342 MTMR7Q9Y216 660 aa9.69□□□□□ -0.86
NSMCE1-207ENST00000564342 LCTP09848 1927 aa9.68□□□□□ -0.86
NSMCE1-207ENST00000564342 ZNF536O15090 1300 aa9.68□□□□□ -0.86
NSMCE1-207ENST00000564342 FARP2O94887 1054 aaPredicted RBP9.68□□□□□ -0.86
NSMCE1-207ENST00000564342 TFRCP02786 760 aaKnown RBP9.68□□□□□ -0.86
NSMCE1-207ENST00000564342 CYP21A2P08686 494 aa9.68□□□□□ -0.86
NSMCE1-207ENST00000564342 CYP2C19P33261 490 aa9.68□□□□□ -0.86
NSMCE1-207ENST00000564342 KCTD2Q14681 263 aa9.68□□□□□ -0.86
NSMCE1-207ENST00000564342 MFSD14CQ5VZR4 134 aa9.68□□□□□ -0.86
NSMCE1-207ENST00000564342 OLFML2BQ68BL8 750 aa9.68□□□□□ -0.86
NSMCE1-207ENST00000564342 BTNL9Q6UXG8 535 aa9.68□□□□□ -0.86
NSMCE1-207ENST00000564342 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.68□□□□□ -0.86
NSMCE1-207ENST00000564342 DGKHQ86XP1 1220 aa9.68□□□□□ -0.86
NSMCE1-207ENST00000564342 TRPV1Q8NER1 839 aa9.68□□□□□ -0.86
NSMCE1-207ENST00000564342 ANKS1AQ92625 1134 aa9.68□□□□□ -0.86
NSMCE1-207ENST00000564342 MAML3Q96JK9 1138 aa9.68□□□□□ -0.86
NSMCE1-207ENST00000564342 KRT23Q9C075 422 aa9.68□□□□□ -0.86
NSMCE1-207ENST00000564342 ZSWIM5Q9P217 1185 aa9.68□□□□□ -0.86
NSMCE1-207ENST00000564342 PRR12Q9ULL5 1215 aa9.68□□□□□ -0.86
NSMCE1-207ENST00000564342 ISY1Q9ULR0 285 aaKnown RBP9.68□□□□□ -0.86
NSMCE1-207ENST00000564342 SMCHD1A6NHR9 2005 aa9.68□□□□□ -0.86
NSMCE1-207ENST00000564342 TNKSO95271 1327 aa9.67□□□□□ -0.86
NSMCE1-207ENST00000564342 FRMPD2Q68DX3 1309 aaPredicted RBP9.67□□□□□ -0.86
NSMCE1-207ENST00000564342 PGK2P07205 417 aa9.67□□□□□ -0.86
NSMCE1-207ENST00000564342 SNHG28P0DPA3 235 aa9.67□□□□□ -0.86
NSMCE1-207ENST00000564342 PDHBP11177 359 aa9.67□□□□□ -0.86
NSMCE1-207ENST00000564342 CYBAP13498 195 aa9.67□□□□□ -0.86
NSMCE1-207ENST00000564342 SLC4A3P48751 1232 aa9.67□□□□□ -0.86
NSMCE1-207ENST00000564342 IKQ13123 557 aaPredicted RBP9.67□□□□□ -0.86
NSMCE1-207ENST00000564342 CCDC96Q2M329 555 aa9.67□□□□□ -0.86
NSMCE1-207ENST00000564342 ZNF792Q3KQV3 632 aa9.67□□□□□ -0.86
NSMCE1-207ENST00000564342 BMP2KLQ5H9B9 411 aa9.67□□□□□ -0.86
NSMCE1-207ENST00000564342 TTBK2Q6IQ55 1244 aa9.67□□□□□ -0.86
NSMCE1-207ENST00000564342 IQCA1Q86XH1 822 aa9.67□□□□□ -0.86
NSMCE1-207ENST00000564342 ANKLE1Q8NAG6 615 aa9.67□□□□□ -0.86
NSMCE1-207ENST00000564342 MAP4K1Q92918 833 aa9.67□□□□□ -0.86
NSMCE1-207ENST00000564342 CCDC136Q96JN2 1154 aa9.67□□□□□ -0.86
NSMCE1-207ENST00000564342 CNNM2Q9H8M5 875 aa9.67□□□□□ -0.86
NSMCE1-207ENST00000564342 SLC5A4Q9NY91 659 aa9.67□□□□□ -0.86
NSMCE1-207ENST00000564342 OGDHLQ9ULD0 1010 aa9.67□□□□□ -0.86
NSMCE1-207ENST00000564342 DIS3Q9Y2L1 958 aaKnown RBP9.67□□□□□ -0.86
NSMCE1-207ENST00000564342 CTDP1Q9Y5B0 961 aaPredicted RBP9.67□□□□□ -0.86
NSMCE1-207ENST00000564342 TAF6LQ9Y6J9 622 aa9.67□□□□□ -0.86
NSMCE1-207ENST00000564342 MCM3APO60318 1980 aa9.66□□□□□ -0.86
NSMCE1-207ENST00000564342 LRRC37A2A6NM11 1700 aa9.66□□□□□ -0.86
NSMCE1-207ENST00000564342 DNAJC25-GNG10A0A024R161 153 aa9.66□□□□□ -0.86
NSMCE1-207ENST00000564342 SLC16A2P36021 539 aa9.66□□□□□ -0.86
NSMCE1-207ENST00000564342 SNAP25P60880 206 aa9.66□□□□□ -0.86
NSMCE1-207ENST00000564342 ZNF543Q08ER8 600 aa9.66□□□□□ -0.86
NSMCE1-207ENST00000564342 CCDC178Q5BJE1 867 aa9.66□□□□□ -0.86
NSMCE1-207ENST00000564342 PRPF38BQ5VTL8 546 aaKnown RBP9.66□□□□□ -0.86
NSMCE1-207ENST00000564342 STOX1Q6ZVD7 989 aa9.66□□□□□ -0.86
NSMCE1-207ENST00000564342 CYB5R4Q7L1T6 521 aa9.66□□□□□ -0.86
NSMCE1-207ENST00000564342 ENAHQ8N8S7 591 aaPredicted RBP9.66□□□□□ -0.86
NSMCE1-207ENST00000564342 CHST13Q8NET6 341 aa9.66□□□□□ -0.86
NSMCE1-207ENST00000564342 DIS3LQ8TF46 1054 aaKnown RBP9.66□□□□□ -0.86
NSMCE1-207ENST00000564342 AGBL1Q96MI9 1066 aa9.66□□□□□ -0.86
NSMCE1-207ENST00000564342 ZSCAN10Q96SZ4 725 aaPredicted RBP9.66□□□□□ -0.86
NSMCE1-207ENST00000564342 ESYT1Q9BSJ8 1104 aa9.66□□□□□ -0.86
NSMCE1-207ENST00000564342 RANBP17Q9H2T7 1088 aaKnown RBP9.66□□□□□ -0.86
NSMCE1-207ENST00000564342 GPCPD1Q9NPB8 672 aa9.66□□□□□ -0.86
NSMCE1-207ENST00000564342 FBXO40Q9UH90 709 aa9.66□□□□□ -0.86
NSMCE1-207ENST00000564342 E7EWF7 191 aa9.65□□□□□ -0.86
NSMCE1-207ENST00000564342 TAL1P17542 331 aaPredicted RBP9.65□□□□□ -0.86
NSMCE1-207ENST00000564342 SEC23AQ15436 765 aa9.65□□□□□ -0.86
NSMCE1-207ENST00000564342 SYDE2Q5VT97 1194 aa9.65□□□□□ -0.86
NSMCE1-207ENST00000564342 CCDC174Q6PII3 467 aa9.65□□□□□ -0.86
NSMCE1-207ENST00000564342 PNMA1Q8ND90 353 aa9.65□□□□□ -0.86
NSMCE1-207ENST00000564342 DDX11Q96FC9 970 aa9.65□□□□□ -0.86
NSMCE1-207ENST00000564342 PAWRQ96IZ0 340 aaKnown RBP9.65□□□□□ -0.86
NSMCE1-207ENST00000564342 FGD4Q96M96 766 aa9.65□□□□□ -0.86
NSMCE1-207ENST00000564342 TINF2Q9BSI4 451 aa9.65□□□□□ -0.86
NSMCE1-207ENST00000564342 LSG1Q9H089 658 aaKnown RBP9.65□□□□□ -0.86
NSMCE1-207ENST00000564342 ACAD9Q9H845 621 aa9.65□□□□□ -0.86
NSMCE1-207ENST00000564342 RNF146Q9NTX7 359 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms