RNA–Protein interactions for RNA: ENST00000564317.5

CDH11-209, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-209ENST00000564317 MORF4L1Q9UBU8 362 aa18.02■□□□□ 0.48
CDH11-209ENST00000564317 ZNF214Q9UL59 606 aaPredicted RBP18.02■□□□□ 0.48
CDH11-209ENST00000564317 RABGAP1Q9Y3P9 1069 aa18.02■□□□□ 0.48
CDH11-209ENST00000564317 PPP1R11O60927 126 aaPredicted RBP18.01■□□□□ 0.47
CDH11-209ENST00000564317 Q3C1V9 767 aa18.01■□□□□ 0.47
CDH11-209ENST00000564317 HOMER1Q86YM7 354 aa18.01■□□□□ 0.47
CDH11-209ENST00000564317 CCDC83Q8IWF9 413 aa18.01■□□□□ 0.47
CDH11-209ENST00000564317 MB21D1Q8N884 522 aa18.01■□□□□ 0.47
CDH11-209ENST00000564317 PHKBQ93100 1093 aa18.01■□□□□ 0.47
CDH11-209ENST00000564317 SNX21Q969T3 373 aa18.01■□□□□ 0.47
CDH11-209ENST00000564317 SH2B1Q9NRF2 756 aaPredicted RBP18.01■□□□□ 0.47
CDH11-209ENST00000564317 TSKSQ9UJT2 592 aa18.01■□□□□ 0.47
CDH11-209ENST00000564317 COL11A1P12107 1806 aaPredicted RBP18■□□□□ 0.47
CDH11-209ENST00000564317 FDX1P10109 184 aa18■□□□□ 0.47
CDH11-209ENST00000564317 IFNAR1P17181 557 aa18■□□□□ 0.47
CDH11-209ENST00000564317 ERVK-9P63128 1117 aa18■□□□□ 0.47
CDH11-209ENST00000564317 ERVK-24P63145 666 aa18■□□□□ 0.47
CDH11-209ENST00000564317 FAM110CQ1W6H9 321 aa18■□□□□ 0.47
CDH11-209ENST00000564317 CPXCR1Q8N123 301 aa18■□□□□ 0.47
CDH11-209ENST00000564317 AGBL1Q96MI9 1066 aa18■□□□□ 0.47
CDH11-209ENST00000564317 CPLX1O14810 134 aa17.99■□□□□ 0.47
CDH11-209ENST00000564317 ATP2A1O14983 1001 aa17.99■□□□□ 0.47
CDH11-209ENST00000564317 ZBTB5O15062 677 aa17.99■□□□□ 0.47
CDH11-209ENST00000564317 ICAM1P05362 532 aa17.99■□□□□ 0.47
CDH11-209ENST00000564317 PLS1Q14651 629 aa17.99■□□□□ 0.47
CDH11-209ENST00000564317 NSUN7Q8NE18 718 aaKnown RBP17.99■□□□□ 0.47
CDH11-209ENST00000564317 GPRC5AQ8NFJ5 357 aa17.99■□□□□ 0.47
CDH11-209ENST00000564317 RRP36Q96EU6 259 aaKnown RBP17.99■□□□□ 0.47
CDH11-209ENST00000564317 MOV10L1Q9BXT6 1211 aaKnown RBP17.99■□□□□ 0.47
CDH11-209ENST00000564317 SPATC1LQ9H0A9 340 aa17.99■□□□□ 0.47
CDH11-209ENST00000564317 RIPK3Q9Y572 518 aa17.99■□□□□ 0.47
CDH11-209ENST00000564317 CTDP1Q9Y5B0 961 aaPredicted RBP17.99■□□□□ 0.47
CDH11-209ENST00000564317 V9GY48 417 aaPredicted RBP17.99■□□□□ 0.47
CDH11-209ENST00000564317 JAK2O60674 1132 aa17.98■□□□□ 0.47
CDH11-209ENST00000564317 STAT3P40763 770 aa17.98■□□□□ 0.47
CDH11-209ENST00000564317 OAZ1P54368 228 aa17.98■□□□□ 0.47
CDH11-209ENST00000564317 SNRNP48Q6IEG0 339 aaKnown RBP17.98■□□□□ 0.47
CDH11-209ENST00000564317 BEGAINQ9BUH8 593 aa17.98■□□□□ 0.47
CDH11-209ENST00000564317 SLC26A6Q9BXS9 759 aa17.98■□□□□ 0.47
CDH11-209ENST00000564317 TEX13BQ9BXU2 312 aa17.98■□□□□ 0.47
CDH11-209ENST00000564317 PORCNQ9H237 461 aa17.98■□□□□ 0.47
CDH11-209ENST00000564317 CCPG1Q9ULG6 757 aa17.98■□□□□ 0.47
CDH11-209ENST00000564317 BAZ2BQ9UIF8 2168 aaKnown RBP17.97■□□□□ 0.47
CDH11-209ENST00000564317 PNMA6FA0A0J9YX94 578 aa17.97■□□□□ 0.47
CDH11-209ENST00000564317 PTPDC1A2A3K4 754 aa17.97■□□□□ 0.47
CDH11-209ENST00000564317 K7ELQ4 463 aaPredicted RBP17.97■□□□□ 0.47
CDH11-209ENST00000564317 GPR25O00155 361 aa17.97■□□□□ 0.47
CDH11-209ENST00000564317 PRPF3O43395 683 aaKnown RBP17.97■□□□□ 0.47
CDH11-209ENST00000564317 FMNL1O95466 1100 aaPredicted RBP17.97■□□□□ 0.47
CDH11-209ENST00000564317 SLC4A3P48751 1232 aa17.97■□□□□ 0.47
CDH11-209ENST00000564317 PKN1Q16512 942 aa17.97■□□□□ 0.47
CDH11-209ENST00000564317 CPLX2Q6PUV4 134 aaKnown RBP17.97■□□□□ 0.47
CDH11-209ENST00000564317 RIOX2Q8IUF8 465 aa17.97■□□□□ 0.47
CDH11-209ENST00000564317 RNF26Q9BY78 433 aaPredicted RBP17.97■□□□□ 0.47
CDH11-209ENST00000564317 ECM2O94769 699 aaPredicted RBP17.96■□□□□ 0.47
CDH11-209ENST00000564317 CTGFP29279 349 aa17.96■□□□□ 0.47
CDH11-209ENST00000564317 CAP1Q01518 475 aa17.96■□□□□ 0.47
CDH11-209ENST00000564317 SSRP1Q08945 709 aaKnown RBP17.96■□□□□ 0.47
CDH11-209ENST00000564317 USH1GQ495M9 461 aa17.96■□□□□ 0.47
CDH11-209ENST00000564317 FBXO11Q86XK2 927 aa17.96■□□□□ 0.47
CDH11-209ENST00000564317 HSCBQ8IWL3 235 aa17.96■□□□□ 0.47
CDH11-209ENST00000564317 EFCC1Q9HA90 598 aa17.96■□□□□ 0.47
CDH11-209ENST00000564317 TSHZ2Q9NRE2 1034 aa17.96■□□□□ 0.47
CDH11-209ENST00000564317 SEC63Q9UGP8 760 aaKnown RBP17.96■□□□□ 0.47
CDH11-209ENST00000564317 STK36Q9NRP7 1315 aa17.96■□□□□ 0.46
CDH11-209ENST00000564317 CDKL5O76039 1030 aa17.95■□□□□ 0.46
CDH11-209ENST00000564317 HSPA1AP0DMV8 641 aaKnown RBP17.95■□□□□ 0.46
CDH11-209ENST00000564317 HSPA1BP0DMV9 641 aaKnown RBP17.95■□□□□ 0.46
CDH11-209ENST00000564317 ALAS1P13196 640 aa17.95■□□□□ 0.46
CDH11-209ENST00000564317 FDPSP14324 419 aaKnown RBP17.95■□□□□ 0.46
CDH11-209ENST00000564317 ERCC3P19447 782 aa17.95■□□□□ 0.46
CDH11-209ENST00000564317 CUL4AQ13619 759 aa17.95■□□□□ 0.46
CDH11-209ENST00000564317 WWC2Q6AWC2 1192 aa17.95■□□□□ 0.46
CDH11-209ENST00000564317 SMARCC2Q8TAQ2 1214 aa17.95■□□□□ 0.46
CDH11-209ENST00000564317 GPKOWQ92917 476 aaPredicted RBP eCLIP17.95■□□□□ 0.46
CDH11-209ENST00000564317 COA7Q96BR5 231 aa17.95■□□□□ 0.46
CDH11-209ENST00000564317 DDX11Q96FC9 970 aa17.95■□□□□ 0.46
CDH11-209ENST00000564317 AIFM3Q96NN9 605 aa17.95■□□□□ 0.46
CDH11-209ENST00000564317 AMNQ9BXJ7 453 aa17.95■□□□□ 0.46
CDH11-209ENST00000564317 ARHGAP39Q9C0H5 1083 aa17.95■□□□□ 0.46
CDH11-209ENST00000564317 HOMER2Q9NSB8 354 aa17.95■□□□□ 0.46
CDH11-209ENST00000564317 ZSWIM8A7E2V4 1837 aa17.94■□□□□ 0.46
CDH11-209ENST00000564317 FOXN1O15353 648 aa17.94■□□□□ 0.46
CDH11-209ENST00000564317 SP3Q02447 781 aa17.94■□□□□ 0.46
CDH11-209ENST00000564317 PFKFB3Q16875 520 aaPredicted RBP17.94■□□□□ 0.46
CDH11-209ENST00000564317 MUM1L1Q5H9M0 696 aa17.94■□□□□ 0.46
CDH11-209ENST00000564317 TYW1BQ6NUM6 668 aa17.94■□□□□ 0.46
CDH11-209ENST00000564317 HEATR3Q7Z4Q2 680 aa17.94■□□□□ 0.46
CDH11-209ENST00000564317 NCAPG2Q86XI2 1143 aa17.94■□□□□ 0.46
CDH11-209ENST00000564317 TRIM22Q8IYM9 498 aa17.94■□□□□ 0.46
CDH11-209ENST00000564317 SHCBP1Q8NEM2 672 aa17.94■□□□□ 0.46
CDH11-209ENST00000564317 CLEC4DQ8WXI8 215 aa17.94■□□□□ 0.46
CDH11-209ENST00000564317 SHISA4Q96DD7 197 aa17.94■□□□□ 0.46
CDH11-209ENST00000564317 LLPHQ9BRT6 129 aaKnown RBP17.94■□□□□ 0.46
CDH11-209ENST00000564317 RNF146Q9NTX7 359 aa17.94■□□□□ 0.46
CDH11-209ENST00000564317 ORC3Q9UBD5 711 aaPredicted RBP17.94■□□□□ 0.46
CDH11-209ENST00000564317 ABCB11O95342 1321 aa17.94■□□□□ 0.46
CDH11-209ENST00000564317 CEP350Q5VT06 3117 aa17.94■□□□□ 0.46
CDH11-209ENST00000564317 OPLAHO14841 1288 aa17.93■□□□□ 0.46
CDH11-209ENST00000564317 SLC25A27O95847 323 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms