RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 RASSF7Q02833 373 aa12.43□□□□□ -0.42
TCF4-222ENST00000564228 SLC39A14Q15043 492 aa12.43□□□□□ -0.42
TCF4-222ENST00000564228 IMMTQ16891 758 aaKnown RBP12.43□□□□□ -0.42
TCF4-222ENST00000564228 TUBB8Q3ZCM7 444 aa12.43□□□□□ -0.42
TCF4-222ENST00000564228 DACT2Q5SW24 774 aa12.43□□□□□ -0.42
TCF4-222ENST00000564228 STOX1Q6ZVD7 989 aa12.43□□□□□ -0.42
TCF4-222ENST00000564228 NIM1KQ8IY84 436 aa12.43□□□□□ -0.42
TCF4-222ENST00000564228 IFNL3Q8IZI9 196 aa12.43□□□□□ -0.42
TCF4-222ENST00000564228 JMYQ8N9B5 988 aa12.43□□□□□ -0.42
TCF4-222ENST00000564228 RHOXF2Q9BQY4 288 aa12.43□□□□□ -0.42
TCF4-222ENST00000564228 NAPBQ9H115 298 aa12.43□□□□□ -0.42
TCF4-222ENST00000564228 EPB41L4AQ9HCS5 686 aaPredicted RBP12.43□□□□□ -0.42
TCF4-222ENST00000564228 ECM29Q5VYK3 1845 aa12.43□□□□□ -0.42
TCF4-222ENST00000564228 NAV1Q8NEY1 1877 aa12.43□□□□□ -0.42
TCF4-222ENST00000564228 TARSL2A2RTX5 802 aaKnown RBP12.43□□□□□ -0.42
TCF4-222ENST00000564228 RAD17O75943 681 aa12.43□□□□□ -0.42
TCF4-222ENST00000564228 FDPSP14324 419 aaKnown RBP12.43□□□□□ -0.42
TCF4-222ENST00000564228 LIG3P49916 1009 aa12.43□□□□□ -0.42
TCF4-222ENST00000564228 ADKP55263 362 aaKnown RBP12.43□□□□□ -0.42
TCF4-222ENST00000564228 GUCY1B3Q02153 619 aa12.43□□□□□ -0.42
TCF4-222ENST00000564228 PPFIA1Q13136 1202 aa12.43□□□□□ -0.42
TCF4-222ENST00000564228 ZNF569Q5MCW4 686 aa12.43□□□□□ -0.42
TCF4-222ENST00000564228 WWC2Q6AWC2 1192 aa12.43□□□□□ -0.42
TCF4-222ENST00000564228 TMED8Q6PL24 325 aaPredicted RBP12.43□□□□□ -0.42
TCF4-222ENST00000564228 KIAA0825Q8IV33 1275 aa12.43□□□□□ -0.42
TCF4-222ENST00000564228 SLF2Q8IX21 1173 aa12.43□□□□□ -0.42
TCF4-222ENST00000564228 IGSF22Q8N9C0 903 aa12.43□□□□□ -0.42
TCF4-222ENST00000564228 CCDC148Q8NFR7 591 aa12.43□□□□□ -0.42
TCF4-222ENST00000564228 ENOX1Q8TC92 643 aaKnown RBP12.43□□□□□ -0.42
TCF4-222ENST00000564228 CCDC51Q96ER9 411 aa12.43□□□□□ -0.42
TCF4-222ENST00000564228 SYT17Q9BSW7 474 aa12.43□□□□□ -0.42
TCF4-222ENST00000564228 NACAP1Q9BZK3 213 aa12.43□□□□□ -0.42
TCF4-222ENST00000564228 LAMB1P07942 1786 aa12.42□□□□□ -0.42
TCF4-222ENST00000564228 FOCADQ5VW36 1801 aa12.42□□□□□ -0.42
TCF4-222ENST00000564228 MYH1P12882 1939 aa12.42□□□□□ -0.42
TCF4-222ENST00000564228 SHTN1A0MZ66 631 aa12.42□□□□□ -0.42
TCF4-222ENST00000564228 ZNF213O14771 459 aa12.42□□□□□ -0.42
TCF4-222ENST00000564228 BAG3O95817 575 aa12.42□□□□□ -0.42
TCF4-222ENST00000564228 INPP5BP32019 993 aa12.42□□□□□ -0.42
TCF4-222ENST00000564228 BTDP43251 543 aa12.42□□□□□ -0.42
TCF4-222ENST00000564228 AMOTL1Q8IY63 956 aa12.42□□□□□ -0.42
TCF4-222ENST00000564228 HS6ST3Q8IZP7 471 aa12.42□□□□□ -0.42
TCF4-222ENST00000564228 FAM76AQ8TAV0 307 aa12.42□□□□□ -0.42
TCF4-222ENST00000564228 COG1Q8WTW3 980 aa12.42□□□□□ -0.42
TCF4-222ENST00000564228 C8orf76Q96K31 380 aa12.42□□□□□ -0.42
TCF4-222ENST00000564228 CABS1Q96KC9 395 aa12.42□□□□□ -0.42
TCF4-222ENST00000564228 CRNKL1Q9BZJ0 848 aaKnown RBP12.42□□□□□ -0.42
TCF4-222ENST00000564228 VPS33BQ9H267 617 aa12.42□□□□□ -0.42
TCF4-222ENST00000564228 HOOK1Q9UJC3 728 aaKnown RBP12.42□□□□□ -0.42
TCF4-222ENST00000564228 SUGT1Q9Y2Z0 365 aa12.42□□□□□ -0.42
TCF4-222ENST00000564228 SBF1O95248 1867 aa12.42□□□□□ -0.42
TCF4-222ENST00000564228 CCT5P48643 541 aa12.41□□□□□ -0.42
TCF4-222ENST00000564228 IRAK1P51617 712 aa12.41□□□□□ -0.42
TCF4-222ENST00000564228 USP14P54578 494 aa12.41□□□□□ -0.42
TCF4-222ENST00000564228 CCT2P78371 535 aaKnown RBP12.41□□□□□ -0.42
TCF4-222ENST00000564228 NR1I3Q14994 352 aa12.41□□□□□ -0.42
TCF4-222ENST00000564228 MLKLQ8NB16 471 aa12.41□□□□□ -0.42
TCF4-222ENST00000564228 SH3RF3Q8TEJ3 882 aaPredicted RBP12.41□□□□□ -0.42
TCF4-222ENST00000564228 JDP2Q8WYK2 163 aa12.41□□□□□ -0.42
TCF4-222ENST00000564228 RPGRIP1Q96KN7 1286 aa12.41□□□□□ -0.42
TCF4-222ENST00000564228 LRRC2Q9BYS8 371 aa12.41□□□□□ -0.42
TCF4-222ENST00000564228 IRX2Q9BZI1 471 aaPredicted RBP12.41□□□□□ -0.42
TCF4-222ENST00000564228 PLEKHA4Q9H4M7 779 aa12.41□□□□□ -0.42
TCF4-222ENST00000564228 LZTFL1Q9NQ48 299 aa12.41□□□□□ -0.42
TCF4-222ENST00000564228 DICER1Q9UPY3 1922 aaKnown RBP12.41□□□□□ -0.42
TCF4-222ENST00000564228 A0A1B0GTH6 734 aa12.41□□□□□ -0.42
TCF4-222ENST00000564228 TMCO5BA8MYB1 307 aa12.41□□□□□ -0.42
TCF4-222ENST00000564228 FSBPO95073 299 aa12.41□□□□□ -0.42
TCF4-222ENST00000564228 PNOCQ13519 176 aa12.41□□□□□ -0.42
TCF4-222ENST00000564228 STIM1Q13586 685 aa12.41□□□□□ -0.42
TCF4-222ENST00000564228 RESP18Q5W5W9 173 aa12.41□□□□□ -0.42
TCF4-222ENST00000564228 RAD9BQ6WBX8 426 aa12.41□□□□□ -0.42
TCF4-222ENST00000564228 SLC35F6Q8N357 371 aa12.41□□□□□ -0.42
TCF4-222ENST00000564228 CLIC6Q96NY7 704 aa12.41□□□□□ -0.42
TCF4-222ENST00000564228 NCOA5Q9HCD5 579 aaKnown RBP12.41□□□□□ -0.42
TCF4-222ENST00000564228 BCCIPQ9P287 314 aaKnown RBP eCLIP12.41□□□□□ -0.42
TCF4-222ENST00000564228 ZNRF3Q9ULT6 936 aa12.41□□□□□ -0.42
TCF4-222ENST00000564228 DAGLAQ9Y4D2 1042 aa12.41□□□□□ -0.42
TCF4-222ENST00000564228 GPR75-ASB3A0A0A6YYF3 556 aa12.4□□□□□ -0.42
TCF4-222ENST00000564228 SOWAHDA6NJG2 315 aa12.4□□□□□ -0.42
TCF4-222ENST00000564228 E7EWF7 191 aa12.4□□□□□ -0.42
TCF4-222ENST00000564228 PSMD14O00487 310 aa12.4□□□□□ -0.42
TCF4-222ENST00000564228 EIF3HO15372 352 aaKnown RBP eCLIP12.4□□□□□ -0.42
TCF4-222ENST00000564228 FKBP1AP62942 108 aaKnown RBP12.4□□□□□ -0.42
TCF4-222ENST00000564228 AMPD2Q01433 879 aa12.4□□□□□ -0.42
TCF4-222ENST00000564228 NEDD9Q14511 834 aa12.4□□□□□ -0.42
TCF4-222ENST00000564228 MTF1Q14872 753 aa12.4□□□□□ -0.42
TCF4-222ENST00000564228 ALX1Q15699 326 aa12.4□□□□□ -0.42
TCF4-222ENST00000564228 ISM2Q6H9L7 571 aa12.4□□□□□ -0.42
TCF4-222ENST00000564228 ARHGAP27Q6ZUM4 889 aa12.4□□□□□ -0.42
TCF4-222ENST00000564228 B4GALNT4Q76KP1 1039 aa12.4□□□□□ -0.42
TCF4-222ENST00000564228 METTL16Q86W50 562 aaKnown RBP12.4□□□□□ -0.42
TCF4-222ENST00000564228 STK11IPQ8N1F8 1099 aa12.4□□□□□ -0.42
TCF4-222ENST00000564228 TRIML1Q8N9V2 468 aa12.4□□□□□ -0.42
TCF4-222ENST00000564228 TEKT1Q969V4 418 aa12.4□□□□□ -0.42
TCF4-222ENST00000564228 MYO6Q9UM54 1294 aa12.4□□□□□ -0.42
TCF4-222ENST00000564228 MYH8P13535 1937 aa12.4□□□□□ -0.42
TCF4-222ENST00000564228 GAKO14976 1311 aa12.4□□□□□ -0.42
TCF4-222ENST00000564228 CCDC189A1A4V9 331 aa12.39□□□□□ -0.43
TCF4-222ENST00000564228 FNTAP49354 379 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms