RNA–Protein interactions for RNA: ENST00000563995.1

SLX1A-204, Transcript of SLX1 homolog A, structure-specific endonuclease subunit, humanhuman

TSL 3

Gene SLX1A, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX1A-204ENST00000563995 EXOSC10Q01780 885 aaKnown RBP22.79■■□□□ 1.24
SLX1A-204ENST00000563995 CCDC96Q2M329 555 aa22.79■■□□□ 1.24
SLX1A-204ENST00000563995 KCTD1Q719H9 257 aa22.79■■□□□ 1.24
SLX1A-204ENST00000563995 ATG4CQ96DT6 458 aa22.79■■□□□ 1.24
SLX1A-204ENST00000563995 PORCNQ9H237 461 aa22.79■■□□□ 1.24
SLX1A-204ENST00000563995 LY9Q9HBG7 655 aa22.79■■□□□ 1.24
SLX1A-204ENST00000563995 SENP2Q9HC62 589 aa22.79■■□□□ 1.24
SLX1A-204ENST00000563995 ISY1Q9ULR0 285 aaKnown RBP22.79■■□□□ 1.24
SLX1A-204ENST00000563995 RABGAP1Q9Y3P9 1069 aa22.79■■□□□ 1.24
SLX1A-204ENST00000563995 TMEM232C9JQI7 657 aa22.78■■□□□ 1.24
SLX1A-204ENST00000563995 PLA2G6O60733 806 aa22.78■■□□□ 1.24
SLX1A-204ENST00000563995 CNMDO75829 334 aa22.78■■□□□ 1.24
SLX1A-204ENST00000563995 COL6A1P12109 1028 aa22.78■■□□□ 1.24
SLX1A-204ENST00000563995 COL9A1P20849 921 aa22.78■■□□□ 1.24
SLX1A-204ENST00000563995 PSMA5P28066 241 aa22.78■■□□□ 1.24
SLX1A-204ENST00000563995 MAGEA10P43363 369 aaPredicted RBP22.78■■□□□ 1.24
SLX1A-204ENST00000563995 STAT2P52630 851 aa22.78■■□□□ 1.24
SLX1A-204ENST00000563995 CACNB2Q08289 660 aaPredicted RBP22.78■■□□□ 1.24
SLX1A-204ENST00000563995 SAMD1Q6SPF0 538 aaPredicted RBP22.78■■□□□ 1.24
SLX1A-204ENST00000563995 TRMT44Q8IYL2 757 aaKnown RBP22.78■■□□□ 1.24
SLX1A-204ENST00000563995 MB21D1Q8N884 522 aa22.78■■□□□ 1.24
SLX1A-204ENST00000563995 PAGR1Q9BTK6 254 aa22.78■■□□□ 1.24
SLX1A-204ENST00000563995 GPHNQ9NQX3 736 aaPredicted RBP22.78■■□□□ 1.24
SLX1A-204ENST00000563995 ADAMTS5Q9UNA0 930 aa22.78■■□□□ 1.24
SLX1A-204ENST00000563995 VCANP13611 3396 aa22.78■■□□□ 1.24
SLX1A-204ENST00000563995 LIFRP42702 1097 aa22.77■■□□□ 1.24
SLX1A-204ENST00000563995 ZNF543Q08ER8 600 aa22.77■■□□□ 1.24
SLX1A-204ENST00000563995 MORN1Q5T089 497 aa22.77■■□□□ 1.24
SLX1A-204ENST00000563995 BLOC1S2Q6QNY1 142 aa22.77■■□□□ 1.24
SLX1A-204ENST00000563995 GPR142Q7Z601 462 aa22.77■■□□□ 1.24
SLX1A-204ENST00000563995 FAM160B2Q86V87 743 aa22.77■■□□□ 1.24
SLX1A-204ENST00000563995 PRPF38AQ8NAV1 312 aaKnown RBP22.77■■□□□ 1.24
SLX1A-204ENST00000563995 CHURC1Q8WUH1 139 aa22.77■■□□□ 1.24
SLX1A-204ENST00000563995 GUCD1Q96NT3 240 aa22.77■■□□□ 1.24
SLX1A-204ENST00000563995 LRRC2Q9BYS8 371 aa22.77■■□□□ 1.24
SLX1A-204ENST00000563995 BTBD7Q9P203 1132 aa22.77■■□□□ 1.24
SLX1A-204ENST00000563995 FRMPD2Q68DX3 1309 aaPredicted RBP22.77■■□□□ 1.24
SLX1A-204ENST00000563995 ANAPC15P60006 121 aa22.76■■□□□ 1.23
SLX1A-204ENST00000563995 CCL14Q16627 93 aa22.76■■□□□ 1.23
SLX1A-204ENST00000563995 LHX8Q68G74 356 aa22.76■■□□□ 1.23
SLX1A-204ENST00000563995 TMTC2Q8N394 836 aa22.76■■□□□ 1.23
SLX1A-204ENST00000563995 TCEANC2Q96MN5 208 aa22.76■■□□□ 1.23
SLX1A-204ENST00000563995 UBE2OQ9C0C9 1292 aaKnown RBP22.76■■□□□ 1.23
SLX1A-204ENST00000563995 VWA5AO00534 786 aa22.75■■□□□ 1.23
SLX1A-204ENST00000563995 CPA1P15085 419 aa22.75■■□□□ 1.23
SLX1A-204ENST00000563995 CASTP20810 708 aaKnown RBP22.75■■□□□ 1.23
SLX1A-204ENST00000563995 CCND3P30281 292 aaPredicted RBP22.75■■□□□ 1.23
SLX1A-204ENST00000563995 RGS2P41220 211 aa22.75■■□□□ 1.23
SLX1A-204ENST00000563995 IKQ13123 557 aaPredicted RBP22.75■■□□□ 1.23
SLX1A-204ENST00000563995 GPATCH4Q5T3I0 446 aaKnown RBP22.75■■□□□ 1.23
SLX1A-204ENST00000563995 BTNL9Q6UXG8 535 aa22.75■■□□□ 1.23
SLX1A-204ENST00000563995 KIFC2Q96AC6 838 aa22.75■■□□□ 1.23
SLX1A-204ENST00000563995 APBA2Q99767 749 aa22.75■■□□□ 1.23
SLX1A-204ENST00000563995 TM6SF1Q9BZW5 370 aa22.75■■□□□ 1.23
SLX1A-204ENST00000563995 LTBP2Q14767 1821 aa22.75■■□□□ 1.23
SLX1A-204ENST00000563995 SPTBN5Q9NRC6 3674 aaKnown RBP22.74■■□□□ 1.23
SLX1A-204ENST00000563995 ZNF236Q9UL36 1845 aa22.74■■□□□ 1.23
SLX1A-204ENST00000563995 RPS6KB1P23443 525 aa22.74■■□□□ 1.23
SLX1A-204ENST00000563995 ASPRV1Q53RT3 343 aa22.74■■□□□ 1.23
SLX1A-204ENST00000563995 TTBK2Q6IQ55 1244 aa22.74■■□□□ 1.23
SLX1A-204ENST00000563995 PLEKHH3Q7Z736 793 aa22.74■■□□□ 1.23
SLX1A-204ENST00000563995 CATIPQ7Z7H3 387 aa22.74■■□□□ 1.23
SLX1A-204ENST00000563995 REPS2Q8NFH8 660 aa22.74■■□□□ 1.23
SLX1A-204ENST00000563995 ZSWIM6Q9HCJ5 1215 aa22.74■■□□□ 1.23
SLX1A-204ENST00000563995 GPCPD1Q9NPB8 672 aa22.74■■□□□ 1.23
SLX1A-204ENST00000563995 CCDC69A6NI79 296 aa22.73■■□□□ 1.23
SLX1A-204ENST00000563995 PARP1P09874 1014 aaKnown RBP22.73■■□□□ 1.23
SLX1A-204ENST00000563995 TROAPQ12815 778 aa22.73■■□□□ 1.23
SLX1A-204ENST00000563995 TMEM132BQ14DG7 1078 aa22.73■■□□□ 1.23
SLX1A-204ENST00000563995 NFXL1Q6ZNB6 911 aa22.73■■□□□ 1.23
SLX1A-204ENST00000563995 SGMS1Q86VZ5 419 aa22.73■■□□□ 1.23
SLX1A-204ENST00000563995 ZNF654Q8IZM8 581 aa22.73■■□□□ 1.23
SLX1A-204ENST00000563995 IL17RAQ96F46 866 aa22.73■■□□□ 1.23
SLX1A-204ENST00000563995 ZBED4O75132 1171 aa22.72■■□□□ 1.23
SLX1A-204ENST00000563995 DDAH1O94760 285 aa22.72■■□□□ 1.23
SLX1A-204ENST00000563995 GOLGA8HP0CJ92 632 aa22.72■■□□□ 1.23
SLX1A-204ENST00000563995 FDX1P10109 184 aa22.72■■□□□ 1.23
SLX1A-204ENST00000563995 CCNA1P78396 465 aa22.72■■□□□ 1.23
SLX1A-204ENST00000563995 LRRC26Q2I0M4 334 aa22.72■■□□□ 1.23
SLX1A-204ENST00000563995 FAM109BQ6ICB4 259 aaPredicted RBP22.72■■□□□ 1.23
SLX1A-204ENST00000563995 RUFY3Q7L099 469 aa22.72■■□□□ 1.23
SLX1A-204ENST00000563995 SPATC1LQ9H0A9 340 aa22.72■■□□□ 1.23
SLX1A-204ENST00000563995 SLC38A10Q9HBR0 1119 aa22.72■■□□□ 1.23
SLX1A-204ENST00000563995 PRR12Q9ULL5 1215 aa22.72■■□□□ 1.23
SLX1A-204ENST00000563995 COL11A1P12107 1806 aaPredicted RBP22.72■■□□□ 1.23
SLX1A-204ENST00000563995 POTEB2H3BUK9 544 aa22.71■■□□□ 1.23
SLX1A-204ENST00000563995 SLC16A2P36021 539 aa22.71■■□□□ 1.23
SLX1A-204ENST00000563995 MAP2K5Q13163 448 aa22.71■■□□□ 1.23
SLX1A-204ENST00000563995 GRM4Q14833 912 aa22.71■■□□□ 1.23
SLX1A-204ENST00000563995 SYDE2Q5VT97 1194 aa22.71■■□□□ 1.23
SLX1A-204ENST00000563995 CCAR1Q8IX12 1150 aaKnown RBP22.71■■□□□ 1.23
SLX1A-204ENST00000563995 FBXL16Q8N461 479 aa22.71■■□□□ 1.23
SLX1A-204ENST00000563995 MAD2L2Q9UI95 211 aa22.71■■□□□ 1.23
SLX1A-204ENST00000563995 ZNF214Q9UL59 606 aaPredicted RBP22.71■■□□□ 1.23
SLX1A-204ENST00000563995 CYP46A1Q9Y6A2 500 aa22.71■■□□□ 1.23
SLX1A-204ENST00000563995 ATP2A1O14983 1001 aa22.7■■□□□ 1.22
SLX1A-204ENST00000563995 FGD1P98174 961 aa22.7■■□□□ 1.22
SLX1A-204ENST00000563995 PLS1Q14651 629 aa22.7■■□□□ 1.22
SLX1A-204ENST00000563995 Q6ZUG5 572 aa22.7■■□□□ 1.22
SLX1A-204ENST00000563995 STAG2Q8N3U4 1231 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms