RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 ZCCHC11Q5TAX3 1644 aaKnown RBP7.26□□□□□ -1.25
SMG1-206ENST00000562668 MAPKBP1O60336 1514 aa7.26□□□□□ -1.25
SMG1-206ENST00000562668 MYOCOSA0A1B0GUC4 107 aa7.25□□□□□ -1.25
SMG1-206ENST00000562668 NRDCO43847 1150 aa7.25□□□□□ -1.25
SMG1-206ENST00000562668 EFEMP2O95967 443 aa7.25□□□□□ -1.25
SMG1-206ENST00000562668 ZNF76P36508 570 aa7.25□□□□□ -1.25
SMG1-206ENST00000562668 GALK1P51570 392 aa7.25□□□□□ -1.25
SMG1-206ENST00000562668 LINC00310P59036 64 aa7.25□□□□□ -1.25
SMG1-206ENST00000562668 TMCO4Q5TGY1 634 aa7.25□□□□□ -1.25
SMG1-206ENST00000562668 CIAPIN1Q6FI81 312 aa7.25□□□□□ -1.25
SMG1-206ENST00000562668 HHIPL1Q96JK4 782 aa7.25□□□□□ -1.25
SMG1-206ENST00000562668 KRTAP4-7Q9BYR0 210 aa7.25□□□□□ -1.25
SMG1-206ENST00000562668 CHST7Q9NS84 486 aa7.25□□□□□ -1.25
SMG1-206ENST00000562668 ZNRF3Q9ULT6 936 aa7.25□□□□□ -1.25
SMG1-206ENST00000562668 CLIP1P30622 1438 aa7.25□□□□□ -1.25
SMG1-206ENST00000562668 CEP162Q5TB80 1403 aa7.25□□□□□ -1.25
SMG1-206ENST00000562668 NUP153P49790 1475 aaKnown RBP7.24□□□□□ -1.25
SMG1-206ENST00000562668 CEP128Q6ZU80 1094 aa7.24□□□□□ -1.25
SMG1-206ENST00000562668 FCRL2Q96LA5 508 aaPredicted RBP7.24□□□□□ -1.25
SMG1-206ENST00000562668 ZNF552Q9H707 407 aaPredicted RBP7.24□□□□□ -1.25
SMG1-206ENST00000562668 PCDHB12Q9Y5F1 795 aa7.24□□□□□ -1.25
SMG1-206ENST00000562668 KIF13AQ9H1H9 1805 aa7.24□□□□□ -1.25
SMG1-206ENST00000562668 OR14I1A6ND48 311 aa7.23□□□□□ -1.25
SMG1-206ENST00000562668 ENDOUP21128 410 aaKnown RBP7.23□□□□□ -1.25
SMG1-206ENST00000562668 RANGAP1P46060 587 aaPredicted RBP7.23□□□□□ -1.25
SMG1-206ENST00000562668 DLG4P78352 724 aa7.23□□□□□ -1.25
SMG1-206ENST00000562668 SLC14A2Q15849 920 aa7.23□□□□□ -1.25
SMG1-206ENST00000562668 ADGRF1Q5T601 910 aa7.23□□□□□ -1.25
SMG1-206ENST00000562668 USP48Q86UV5 1035 aa7.23□□□□□ -1.25
SMG1-206ENST00000562668 SLC9A7Q96T83 725 aa7.23□□□□□ -1.25
SMG1-206ENST00000562668 GFOD1Q9NXC2 390 aa7.23□□□□□ -1.25
SMG1-206ENST00000562668 PRR13Q9NZ81 148 aa7.23□□□□□ -1.25
SMG1-206ENST00000562668 MINPP1Q9UNW1 487 aa7.23□□□□□ -1.25
SMG1-206ENST00000562668 PCF11O94913 1555 aaKnown RBP7.23□□□□□ -1.25
SMG1-206ENST00000562668 ATP10BO94823 1461 aa7.23□□□□□ -1.25
SMG1-206ENST00000562668 TEX51A0A1B0GUA7 166 aa7.22□□□□□ -1.25
SMG1-206ENST00000562668 NUAK1O60285 661 aa7.22□□□□□ -1.25
SMG1-206ENST00000562668 FANCCQ00597 558 aa7.22□□□□□ -1.25
SMG1-206ENST00000562668 ZPBP2Q6X784 338 aa7.22□□□□□ -1.25
SMG1-206ENST00000562668 SIRT2Q8IXJ6 389 aa7.22□□□□□ -1.25
SMG1-206ENST00000562668 CRTAC1Q9NQ79 661 aa7.22□□□□□ -1.25
SMG1-206ENST00000562668 METTL5Q9NRN9 209 aaKnown RBP7.22□□□□□ -1.25
SMG1-206ENST00000562668 SUCOQ9UBS9 1254 aaKnown RBP7.22□□□□□ -1.25
SMG1-206ENST00000562668 DIP2BQ9P265 1576 aa7.21□□□□□ -1.25
SMG1-206ENST00000562668 FMN1Q68DA7 1419 aa7.21□□□□□ -1.25
SMG1-206ENST00000562668 MEIS1O00470 390 aa7.21□□□□□ -1.26
SMG1-206ENST00000562668 ZNF205O95201 554 aa7.21□□□□□ -1.26
SMG1-206ENST00000562668 IMPDH2P12268 514 aa7.21□□□□□ -1.26
SMG1-206ENST00000562668 BMP8BP34820 402 aa7.21□□□□□ -1.26
SMG1-206ENST00000562668 CTSKP43235 329 aa7.21□□□□□ -1.26
SMG1-206ENST00000562668 AUHQ13825 339 aaKnown RBP7.21□□□□□ -1.26
SMG1-206ENST00000562668 AMIGO3Q86WK7 504 aa7.21□□□□□ -1.26
SMG1-206ENST00000562668 TNFRSF10DQ9UBN6 386 aa7.21□□□□□ -1.26
SMG1-206ENST00000562668 FBXL21Q9UKT6 434 aa7.21□□□□□ -1.26
SMG1-206ENST00000562668 GPR55Q9Y2T6 319 aaPredicted RBP7.21□□□□□ -1.26
SMG1-206ENST00000562668 TTBK1Q5TCY1 1321 aaPredicted RBP7.21□□□□□ -1.26
SMG1-206ENST00000562668 HECW1Q76N89 1606 aa7.2□□□□□ -1.26
SMG1-206ENST00000562668 CASKIN1Q8WXD9 1431 aa7.2□□□□□ -1.26
SMG1-206ENST00000562668 FAM86C2PA6NEL3 165 aa7.2□□□□□ -1.26
SMG1-206ENST00000562668 HRKO00198 91 aa7.2□□□□□ -1.26
SMG1-206ENST00000562668 ACRP10323 421 aa7.2□□□□□ -1.26
SMG1-206ENST00000562668 RTP1P59025 263 aa7.2□□□□□ -1.26
SMG1-206ENST00000562668 ZNF394Q53GI3 561 aa7.2□□□□□ -1.26
SMG1-206ENST00000562668 TMEM132EQ6IEE7 984 aa7.2□□□□□ -1.26
SMG1-206ENST00000562668 CRTC3Q6UUV7 619 aa7.2□□□□□ -1.26
SMG1-206ENST00000562668 TAB3Q8N5C8 712 aaPredicted RBP7.2□□□□□ -1.26
SMG1-206ENST00000562668 DHRS1Q96LJ7 313 aa7.2□□□□□ -1.26
SMG1-206ENST00000562668 BACH2Q9BYV9 841 aa7.2□□□□□ -1.26
SMG1-206ENST00000562668 GCM1Q9NP62 436 aa7.2□□□□□ -1.26
SMG1-206ENST00000562668 ERVK13-1Q9NX77 482 aa7.2□□□□□ -1.26
SMG1-206ENST00000562668 PCDHGB7Q9Y5F8 929 aa7.2□□□□□ -1.26
SMG1-206ENST00000562668 TAF6LQ9Y6J9 622 aa7.2□□□□□ -1.26
SMG1-206ENST00000562668 GLI2P10070 1586 aa7.2□□□□□ -1.26
SMG1-206ENST00000562668 ASXL2Q76L83 1435 aa7.19□□□□□ -1.26
SMG1-206ENST00000562668 ABCC10Q5T3U5 1492 aa7.19□□□□□ -1.26
SMG1-206ENST00000562668 EPRSP07814 1512 aaKnown RBP7.19□□□□□ -1.26
SMG1-206ENST00000562668 CDK13Q14004 1512 aaKnown RBP7.19□□□□□ -1.26
SMG1-206ENST00000562668 ZBTB7CA1YPR0 619 aa7.19□□□□□ -1.26
SMG1-206ENST00000562668 FADS2P1A8MWK0 482 aa7.19□□□□□ -1.26
SMG1-206ENST00000562668 PNLIPP16233 465 aa7.19□□□□□ -1.26
SMG1-206ENST00000562668 INTS3Q68E01 1043 aaKnown RBP7.19□□□□□ -1.26
SMG1-206ENST00000562668 FERD3LQ96RJ6 166 aa7.19□□□□□ -1.26
SMG1-206ENST00000562668 PLCD4Q9BRC7 762 aa7.19□□□□□ -1.26
SMG1-206ENST00000562668 CDADC1Q9BWV3 514 aa7.19□□□□□ -1.26
SMG1-206ENST00000562668 FYCO1Q9BQS8 1478 aa7.18□□□□□ -1.26
SMG1-206ENST00000562668 MAGI3Q5TCQ9 1506 aa7.18□□□□□ -1.26
SMG1-206ENST00000562668 C9IYK1 514 aa7.18□□□□□ -1.26
SMG1-206ENST00000562668 SHOXO15266 292 aa7.18□□□□□ -1.26
SMG1-206ENST00000562668 PMS1P54277 932 aaKnown RBP7.18□□□□□ -1.26
SMG1-206ENST00000562668 HSF5Q4G112 596 aaPredicted RBP7.18□□□□□ -1.26
SMG1-206ENST00000562668 GALNT18Q6P9A2 607 aa7.18□□□□□ -1.26
SMG1-206ENST00000562668 SLCO6A1Q86UG4 719 aa7.18□□□□□ -1.26
SMG1-206ENST00000562668 CCDC144CPQ8IYA2 1237 aa7.18□□□□□ -1.26
SMG1-206ENST00000562668 C7orf61Q8IZ16 206 aa7.18□□□□□ -1.26
SMG1-206ENST00000562668 SMARCC1Q92922 1105 aaPredicted RBP7.18□□□□□ -1.26
SMG1-206ENST00000562668 TM9SF2Q99805 663 aa7.18□□□□□ -1.26
SMG1-206ENST00000562668 DSCC1Q9BVC3 393 aa7.18□□□□□ -1.26
SMG1-206ENST00000562668 SGPP1Q9BX95 441 aa7.18□□□□□ -1.26
SMG1-206ENST00000562668 IRF2BPLQ9H1B7 796 aa7.18□□□□□ -1.26
SMG1-206ENST00000562668 PPRC1Q5VV67 1664 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms