RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 KIF6Q6ZMV9 814 aa7.89□□□□□ -1.15
TCF4-213ENST00000562543 IL17REQ8NFR9 667 aa7.89□□□□□ -1.15
TCF4-213ENST00000562543 TRIB2Q92519 343 aa7.89□□□□□ -1.15
TCF4-213ENST00000562543 TRIM43Q96BQ3 446 aaPredicted RBP7.89□□□□□ -1.15
TCF4-213ENST00000562543 COA7Q96BR5 231 aa7.89□□□□□ -1.15
TCF4-213ENST00000562543 KRTAP4-8Q9BYQ9 185 aa7.89□□□□□ -1.15
TCF4-213ENST00000562543 ATP11BQ9Y2G3 1177 aa7.89□□□□□ -1.15
TCF4-213ENST00000562543 AOX1Q06278 1338 aa7.88□□□□□ -1.15
TCF4-213ENST00000562543 CLRN2A0PK11 232 aa7.88□□□□□ -1.15
TCF4-213ENST00000562543 KIAA0825Q8IV33 1275 aa7.88□□□□□ -1.15
TCF4-213ENST00000562543 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.88□□□□□ -1.15
TCF4-213ENST00000562543 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.88□□□□□ -1.15
TCF4-213ENST00000562543 ZDHHC1Q8WTX9 485 aa7.88□□□□□ -1.15
TCF4-213ENST00000562543 RMDN1Q96DB5 314 aa7.88□□□□□ -1.15
TCF4-213ENST00000562543 TEPSINQ96N21 525 aa7.88□□□□□ -1.15
TCF4-213ENST00000562543 CARD11Q9BXL7 1154 aa7.88□□□□□ -1.15
TCF4-213ENST00000562543 MARK1Q9P0L2 795 aa7.88□□□□□ -1.15
TCF4-213ENST00000562543 PCDHAC2Q9Y5I4 1007 aa7.88□□□□□ -1.15
TCF4-213ENST00000562543 MTCH2Q9Y6C9 303 aa7.88□□□□□ -1.15
TCF4-213ENST00000562543 RPAP1Q9BWH6 1393 aaPredicted RBP7.87□□□□□ -1.15
TCF4-213ENST00000562543 GAKO14976 1311 aa7.87□□□□□ -1.15
TCF4-213ENST00000562543 FAM229AH3BQW9 127 aa7.87□□□□□ -1.15
TCF4-213ENST00000562543 FAM157BP0CG42 384 aa7.87□□□□□ -1.15
TCF4-213ENST00000562543 SNX17Q15036 470 aa7.87□□□□□ -1.15
TCF4-213ENST00000562543 DLGAP5Q15398 846 aa7.87□□□□□ -1.15
TCF4-213ENST00000562543 RASIP1Q5U651 963 aa7.87□□□□□ -1.15
TCF4-213ENST00000562543 LRRC69Q6ZNQ3 347 aa7.87□□□□□ -1.15
TCF4-213ENST00000562543 CCDC129Q6ZRS4 1044 aa7.87□□□□□ -1.15
TCF4-213ENST00000562543 SYT9Q86SS6 491 aa7.87□□□□□ -1.15
TCF4-213ENST00000562543 VEZTQ9HBM0 779 aa7.87□□□□□ -1.15
TCF4-213ENST00000562543 ZDHHC3Q9NYG2 299 aa7.87□□□□□ -1.15
TCF4-213ENST00000562543 CEP250Q9BV73 2442 aa7.86□□□□□ -1.15
TCF4-213ENST00000562543 BTBD11A6QL63 1104 aa7.86□□□□□ -1.15
TCF4-213ENST00000562543 EFSO43281 561 aa7.86□□□□□ -1.15
TCF4-213ENST00000562543 GATA4P43694 442 aa7.86□□□□□ -1.15
TCF4-213ENST00000562543 PPATQ06203 517 aa7.86□□□□□ -1.15
TCF4-213ENST00000562543 RAB30Q15771 203 aa7.86□□□□□ -1.15
TCF4-213ENST00000562543 C8orf86Q6ZUL3 223 aa7.86□□□□□ -1.15
TCF4-213ENST00000562543 NGEFQ8N5V2 710 aa7.86□□□□□ -1.15
TCF4-213ENST00000562543 ATOH1Q92858 354 aaPredicted RBP7.86□□□□□ -1.15
TCF4-213ENST00000562543 IRF2BPLQ9H1B7 796 aa7.86□□□□□ -1.15
TCF4-213ENST00000562543 AVENQ9NQS1 362 aaPredicted RBP7.86□□□□□ -1.15
TCF4-213ENST00000562543 GJD2Q9UKL4 321 aa7.86□□□□□ -1.15
TCF4-213ENST00000562543 SPTBN2O15020 2390 aa7.85□□□□□ -1.15
TCF4-213ENST00000562543 MED23Q9ULK4 1368 aa7.85□□□□□ -1.15
TCF4-213ENST00000562543 MYO1BO43795 1136 aa7.85□□□□□ -1.15
TCF4-213ENST00000562543 IL13P35225 146 aa7.85□□□□□ -1.15
TCF4-213ENST00000562543 FPGSQ05932 587 aa7.85□□□□□ -1.15
TCF4-213ENST00000562543 SFSWAPQ12872 951 aaKnown RBP7.85□□□□□ -1.15
TCF4-213ENST00000562543 TRIM60Q495X7 471 aa7.85□□□□□ -1.15
TCF4-213ENST00000562543 SH3PXD2AQ5TCZ1 1133 aa7.85□□□□□ -1.15
TCF4-213ENST00000562543 BMP8AQ7Z5Y6 402 aa7.85□□□□□ -1.15
TCF4-213ENST00000562543 SLC30A3Q99726 388 aa7.85□□□□□ -1.15
TCF4-213ENST00000562543 NKX2-4Q9H2Z4 354 aa7.85□□□□□ -1.15
TCF4-213ENST00000562543 ANKIB1Q9P2G1 1089 aa7.85□□□□□ -1.15
TCF4-213ENST00000562543 DAGLAQ9Y4D2 1042 aa7.85□□□□□ -1.15
TCF4-213ENST00000562543 SH3TC1Q8TE82 1336 aa7.84□□□□□ -1.15
TCF4-213ENST00000562543 ELOA3CA0A087WX78 387 aaPredicted RBP7.84□□□□□ -1.15
TCF4-213ENST00000562543 ELOA3DA6NLF2 546 aaPredicted RBP7.84□□□□□ -1.15
TCF4-213ENST00000562543 SKIP12755 728 aa7.84□□□□□ -1.15
TCF4-213ENST00000562543 CCND3P30281 292 aaPredicted RBP7.84□□□□□ -1.15
TCF4-213ENST00000562543 SF3B3Q15393 1217 aaKnown RBP7.84□□□□□ -1.15
TCF4-213ENST00000562543 PKN1Q16512 942 aa7.84□□□□□ -1.15
TCF4-213ENST00000562543 ELOA3BQ3SY89 546 aa7.84□□□□□ -1.15
TCF4-213ENST00000562543 RAB44Q7Z6P3 723 aaPredicted RBP7.84□□□□□ -1.15
TCF4-213ENST00000562543 ELOA3Q8NG57 546 aa7.84□□□□□ -1.15
TCF4-213ENST00000562543 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.84□□□□□ -1.15
TCF4-213ENST00000562543 SLC28A3Q9HAS3 691 aa7.84□□□□□ -1.15
TCF4-213ENST00000562543 SH2B1Q9NRF2 756 aaPredicted RBP7.84□□□□□ -1.15
TCF4-213ENST00000562543 ZNF358Q9NW07 568 aa7.84□□□□□ -1.15
TCF4-213ENST00000562543 SCHIP1Q9P0W5 487 aaPredicted RBP7.84□□□□□ -1.15
TCF4-213ENST00000562543 MSRAQ9UJ68 235 aa7.84□□□□□ -1.15
TCF4-213ENST00000562543 YBX2Q9Y2T7 364 aaKnown RBP7.84□□□□□ -1.15
TCF4-213ENST00000562543 PTPRFP10586 1907 aa7.84□□□□□ -1.16
TCF4-213ENST00000562543 SPEGQ15772 3267 aa7.83□□□□□ -1.16
TCF4-213ENST00000562543 DNM1LO00429 736 aa7.83□□□□□ -1.16
TCF4-213ENST00000562543 SPATA31C1P0DKV0 1188 aa7.83□□□□□ -1.16
TCF4-213ENST00000562543 IL9P15248 144 aa7.83□□□□□ -1.16
TCF4-213ENST00000562543 RPS8P62241 208 aaKnown RBP7.83□□□□□ -1.16
TCF4-213ENST00000562543 GTF2IP78347 998 aa7.83□□□□□ -1.16
TCF4-213ENST00000562543 CACNB2Q08289 660 aaPredicted RBP7.83□□□□□ -1.16
TCF4-213ENST00000562543 TNFAIP1Q13829 316 aa7.83□□□□□ -1.16
TCF4-213ENST00000562543 FOXD4L6Q3SYB3 417 aaPredicted RBP7.83□□□□□ -1.16
TCF4-213ENST00000562543 ZMYM1Q5SVZ6 1142 aa7.83□□□□□ -1.16
TCF4-213ENST00000562543 SAMD5Q5TGI4 173 aa7.83□□□□□ -1.16
TCF4-213ENST00000562543 FOXD4L3Q6VB84 417 aaPredicted RBP7.83□□□□□ -1.16
TCF4-213ENST00000562543 SLC39A5Q6ZMH5 540 aa7.83□□□□□ -1.16
TCF4-213ENST00000562543 NLRP10Q86W26 655 aa7.83□□□□□ -1.16
TCF4-213ENST00000562543 DEPDC4Q8N2C3 294 aa7.83□□□□□ -1.16
TCF4-213ENST00000562543 PRMT6Q96LA8 375 aaPredicted RBP7.83□□□□□ -1.16
TCF4-213ENST00000562543 WRNIP1Q96S55 665 aa7.83□□□□□ -1.16
TCF4-213ENST00000562543 BSDC1Q9NW68 430 aaPredicted RBP7.83□□□□□ -1.16
TCF4-213ENST00000562543 XDHP47989 1333 aa7.82□□□□□ -1.16
TCF4-213ENST00000562543 GNAT3A8MTJ3 354 aa7.82□□□□□ -1.16
TCF4-213ENST00000562543 M0R082 166 aa7.82□□□□□ -1.16
TCF4-213ENST00000562543 SLC24A1O60721 1099 aa7.82□□□□□ -1.16
TCF4-213ENST00000562543 ALAS2P22557 587 aa7.82□□□□□ -1.16
TCF4-213ENST00000562543 NOS2P35228 1153 aa7.82□□□□□ -1.16
TCF4-213ENST00000562543 NBL1P41271 181 aa7.82□□□□□ -1.16
TCF4-213ENST00000562543 COL9A3Q14050 684 aaPredicted RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms