RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 ZNF174Q15697 407 aa10.88□□□□□ -0.67
CDH13-205ENST00000562307 QRICH1Q2TAL8 776 aa10.88□□□□□ -0.67
CDH13-205ENST00000562307 KIAA1755Q5JYT7 1200 aa10.88□□□□□ -0.67
CDH13-205ENST00000562307 SYDE2Q5VT97 1194 aa10.88□□□□□ -0.67
CDH13-205ENST00000562307 ANGEL2Q5VTE6 544 aaKnown RBP10.88□□□□□ -0.67
CDH13-205ENST00000562307 ARL6IP4Q66PJ3 421 aaKnown RBP10.88□□□□□ -0.67
CDH13-205ENST00000562307 TEX2Q8IWB9 1127 aa10.88□□□□□ -0.67
CDH13-205ENST00000562307 TRPM4Q8TD43 1214 aa10.88□□□□□ -0.67
CDH13-205ENST00000562307 COA7Q96BR5 231 aa10.88□□□□□ -0.67
CDH13-205ENST00000562307 BAZ2BQ9UIF8 2168 aaKnown RBP10.88□□□□□ -0.67
CDH13-205ENST00000562307 SBF1O95248 1867 aa10.87□□□□□ -0.67
CDH13-205ENST00000562307 TMEM232C9JQI7 657 aa10.87□□□□□ -0.67
CDH13-205ENST00000562307 SYKP43405 635 aa10.87□□□□□ -0.67
CDH13-205ENST00000562307 ADCY7P51828 1080 aa10.87□□□□□ -0.67
CDH13-205ENST00000562307 MRPL12P52815 198 aaKnown RBP10.87□□□□□ -0.67
CDH13-205ENST00000562307 GRIN1Q05586 938 aa10.87□□□□□ -0.67
CDH13-205ENST00000562307 PTGDRQ13258 359 aa10.87□□□□□ -0.67
CDH13-205ENST00000562307 NONOQ15233 471 aaKnown RBP eCLIP10.87□□□□□ -0.67
CDH13-205ENST00000562307 CDC37Q16543 378 aaPredicted RBP10.87□□□□□ -0.67
CDH13-205ENST00000562307 UVSSAQ2YD98 709 aa10.87□□□□□ -0.67
CDH13-205ENST00000562307 NBPF12Q5TAG4 269 aaPredicted RBP10.87□□□□□ -0.67
CDH13-205ENST00000562307 DCAF15Q66K64 600 aa10.87□□□□□ -0.67
CDH13-205ENST00000562307 REXO1Q8N1G1 1221 aaKnown RBP10.87□□□□□ -0.67
CDH13-205ENST00000562307 RASGRP4Q8TDF6 673 aa10.87□□□□□ -0.67
CDH13-205ENST00000562307 NUP88Q99567 741 aaPredicted RBP10.87□□□□□ -0.67
CDH13-205ENST00000562307 ZNF341Q9BYN7 854 aa10.87□□□□□ -0.67
CDH13-205ENST00000562307 ADARB2Q9NS39 739 aaKnown RBP10.87□□□□□ -0.67
CDH13-205ENST00000562307 FAM13BQ9NYF5 915 aa10.87□□□□□ -0.67
CDH13-205ENST00000562307 RNF181Q9P0P0 153 aa10.87□□□□□ -0.67
CDH13-205ENST00000562307 KCNH3Q9ULD8 1083 aa10.87□□□□□ -0.67
CDH13-205ENST00000562307 LAD1O00515 517 aa10.86□□□□□ -0.67
CDH13-205ENST00000562307 DDNO94850 711 aaPredicted RBP10.86□□□□□ -0.67
CDH13-205ENST00000562307 PRPHP41219 470 aa10.86□□□□□ -0.67
CDH13-205ENST00000562307 TYRO3Q06418 890 aa10.86□□□□□ -0.67
CDH13-205ENST00000562307 TRAF1Q13077 416 aa10.86□□□□□ -0.67
CDH13-205ENST00000562307 INF2Q27J81 1249 aa10.86□□□□□ -0.67
CDH13-205ENST00000562307 C9orf131Q5VYM1 1079 aa10.86□□□□□ -0.67
CDH13-205ENST00000562307 MCTP2Q6DN12 878 aa10.86□□□□□ -0.67
CDH13-205ENST00000562307 FAM160B2Q86V87 743 aa10.86□□□□□ -0.67
CDH13-205ENST00000562307 CKAP2LQ8IYA6 745 aa10.86□□□□□ -0.67
CDH13-205ENST00000562307 CHURC1Q8WUH1 139 aa10.86□□□□□ -0.67
CDH13-205ENST00000562307 CUL5Q93034 780 aa10.86□□□□□ -0.67
CDH13-205ENST00000562307 SDF4Q9BRK5 362 aa10.86□□□□□ -0.67
CDH13-205ENST00000562307 WDR18Q9BV38 432 aa10.86□□□□□ -0.67
CDH13-205ENST00000562307 AMNQ9BXJ7 453 aa10.86□□□□□ -0.67
CDH13-205ENST00000562307 KIAA1683Q9H0B3 1180 aa10.86□□□□□ -0.67
CDH13-205ENST00000562307 CSRNP2Q9H175 543 aa10.86□□□□□ -0.67
CDH13-205ENST00000562307 PRR12Q9ULL5 1215 aa10.86□□□□□ -0.67
CDH13-205ENST00000562307 SCAF8Q9UPN6 1271 aaKnown RBP10.86□□□□□ -0.67
CDH13-205ENST00000562307 PCDHA1Q9Y5I3 950 aa10.86□□□□□ -0.67
CDH13-205ENST00000562307 MRVI1Q9Y6F6 885 aa10.86□□□□□ -0.67
CDH13-205ENST00000562307 RAD21O60216 631 aa10.85□□□□□ -0.67
CDH13-205ENST00000562307 CAVIN2O95810 425 aa10.85□□□□□ -0.67
CDH13-205ENST00000562307 MCM7P33993 719 aa10.85□□□□□ -0.67
CDH13-205ENST00000562307 STAT2P52630 851 aa10.85□□□□□ -0.67
CDH13-205ENST00000562307 IL17AQ16552 155 aa10.85□□□□□ -0.67
CDH13-205ENST00000562307 SASS6Q6UVJ0 657 aa10.85□□□□□ -0.67
CDH13-205ENST00000562307 KRBA2Q6ZNG9 492 aa10.85□□□□□ -0.67
CDH13-205ENST00000562307 NEK8Q86SG6 692 aa10.85□□□□□ -0.67
CDH13-205ENST00000562307 FBXO11Q86XK2 927 aa10.85□□□□□ -0.67
CDH13-205ENST00000562307 LPAR1Q92633 364 aa10.85□□□□□ -0.67
CDH13-205ENST00000562307 L3MBTL3Q96JM7 780 aaPredicted RBP10.85□□□□□ -0.67
CDH13-205ENST00000562307 PSTPIP2Q9H939 334 aa10.85□□□□□ -0.67
CDH13-205ENST00000562307 GGA3Q9NZ52 723 aa10.85□□□□□ -0.67
CDH13-205ENST00000562307 BIN2Q9UBW5 565 aaPredicted RBP10.85□□□□□ -0.67
CDH13-205ENST00000562307 FEM1BQ9UK73 627 aa10.85□□□□□ -0.67
CDH13-205ENST00000562307 GOLGB1Q14789 3259 aaKnown RBP10.85□□□□□ -0.67
CDH13-205ENST00000562307 ZC3H4Q9UPT8 1303 aaKnown RBP10.84□□□□□ -0.67
CDH13-205ENST00000562307 EDIL3O43854 480 aa10.84□□□□□ -0.67
CDH13-205ENST00000562307 LMOD1P29536 600 aaPredicted RBP10.84□□□□□ -0.67
CDH13-205ENST00000562307 INPP5BP32019 993 aa10.84□□□□□ -0.67
CDH13-205ENST00000562307 LONP1P36776 959 aaKnown RBP10.84□□□□□ -0.67
CDH13-205ENST00000562307 MDM2Q00987 491 aaPredicted RBP10.84□□□□□ -0.67
CDH13-205ENST00000562307 SUPT20HL1Q3ZLR7 823 aa10.84□□□□□ -0.67
CDH13-205ENST00000562307 LONRF3Q496Y0 759 aa10.84□□□□□ -0.67
CDH13-205ENST00000562307 FAM83BQ5T0W9 1011 aa10.84□□□□□ -0.67
CDH13-205ENST00000562307 JAKMIP3Q5VZ66 844 aa10.84□□□□□ -0.67
CDH13-205ENST00000562307 SCYL3Q8IZE3 742 aa10.84□□□□□ -0.67
CDH13-205ENST00000562307 SPICE1Q8N0Z3 855 aa10.84□□□□□ -0.67
CDH13-205ENST00000562307 TBCKQ8TEA7 893 aa10.84□□□□□ -0.67
CDH13-205ENST00000562307 PANK2Q9BZ23 570 aa10.84□□□□□ -0.67
CDH13-205ENST00000562307 GLIS2Q9BZE0 524 aaPredicted RBP10.84□□□□□ -0.67
CDH13-205ENST00000562307 RANBP17Q9H2T7 1088 aaKnown RBP10.84□□□□□ -0.67
CDH13-205ENST00000562307 TMEM260Q9NX78 707 aa10.84□□□□□ -0.67
CDH13-205ENST00000562307 KIAA1468Q9P260 1216 aa10.84□□□□□ -0.67
CDH13-205ENST00000562307 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.84□□□□□ -0.67
CDH13-205ENST00000562307 USP25Q9UHP3 1055 aa10.84□□□□□ -0.67
CDH13-205ENST00000562307 TUBE1Q9UJT0 475 aa10.84□□□□□ -0.67
CDH13-205ENST00000562307 MEIS2O14770 477 aa10.83□□□□□ -0.68
CDH13-205ENST00000562307 WDR46O15213 610 aaKnown RBP10.83□□□□□ -0.68
CDH13-205ENST00000562307 AP3B2Q13367 1082 aa10.83□□□□□ -0.68
CDH13-205ENST00000562307 SPECC1Q5M775 1068 aa10.83□□□□□ -0.68
CDH13-205ENST00000562307 NOL9Q5SY16 702 aaKnown RBP10.83□□□□□ -0.68
CDH13-205ENST00000562307 PPP4R3AQ6IN85 833 aa10.83□□□□□ -0.68
CDH13-205ENST00000562307 KANK3Q6NY19 840 aa10.83□□□□□ -0.68
CDH13-205ENST00000562307 USP49Q70CQ1 688 aa10.83□□□□□ -0.68
CDH13-205ENST00000562307 KLRG1Q96E93 195 aa10.83□□□□□ -0.68
CDH13-205ENST00000562307 NAP1L4Q99733 375 aaKnown RBP10.83□□□□□ -0.68
CDH13-205ENST00000562307 TMEM60Q9H2L4 133 aa10.83□□□□□ -0.68
CDH13-205ENST00000562307 VWA3AA6NCI4 1184 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms