RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 SERINC3Q13530 473 aa5.47□□□□□ -1.53
HERC1-215ENST00000561436 AUHQ13825 339 aaKnown RBP5.47□□□□□ -1.53
HERC1-215ENST00000561436 DDR2Q16832 855 aa5.47□□□□□ -1.53
HERC1-215ENST00000561436 WAPLQ7Z5K2 1190 aa5.47□□□□□ -1.53
HERC1-215ENST00000561436 CHST7Q9NS84 486 aa5.47□□□□□ -1.53
HERC1-215ENST00000561436 TCFL5Q9UL49 500 aa5.47□□□□□ -1.53
HERC1-215ENST00000561436 PCDHB12Q9Y5F1 795 aa5.47□□□□□ -1.53
HERC1-215ENST00000561436 CLASP1Q7Z460 1538 aa5.47□□□□□ -1.53
HERC1-215ENST00000561436 EIF4G3O43432 1585 aaKnown RBP5.46□□□□□ -1.53
HERC1-215ENST00000561436 A0A1W2PQH9 124 aa5.46□□□□□ -1.54
HERC1-215ENST00000561436 TMEM82A0PJX8 343 aa5.46□□□□□ -1.54
HERC1-215ENST00000561436 CCDC85CA6NKD9 419 aa5.46□□□□□ -1.54
HERC1-215ENST00000561436 SIGLEC6O43699 453 aa5.46□□□□□ -1.54
HERC1-215ENST00000561436 PMS1P54277 932 aaKnown RBP5.46□□□□□ -1.54
HERC1-215ENST00000561436 KIR3DS1Q14943 382 aa5.46□□□□□ -1.54
HERC1-215ENST00000561436 MLANAQ16655 118 aa5.46□□□□□ -1.54
HERC1-215ENST00000561436 PRR23BQ6ZRT6 265 aa5.46□□□□□ -1.54
HERC1-215ENST00000561436 SIRT2Q8IXJ6 389 aa5.46□□□□□ -1.54
HERC1-215ENST00000561436 C7orf61Q8IZ16 206 aa5.46□□□□□ -1.54
HERC1-215ENST00000561436 ADCY4Q8NFM4 1077 aa5.46□□□□□ -1.54
HERC1-215ENST00000561436 SYTL5Q8TDW5 730 aaPredicted RBP5.46□□□□□ -1.54
HERC1-215ENST00000561436 FMNL2Q96PY5 1086 aa5.46□□□□□ -1.54
HERC1-215ENST00000561436 DEPDC7Q96QD5 511 aa5.46□□□□□ -1.54
HERC1-215ENST00000561436 DIRC2Q96SL1 478 aa5.46□□□□□ -1.54
HERC1-215ENST00000561436 RNF32Q9H0A6 362 aa5.46□□□□□ -1.54
HERC1-215ENST00000561436 CCDC113Q9H0I3 377 aa5.46□□□□□ -1.54
HERC1-215ENST00000561436 SP110Q9HB58 689 aa5.46□□□□□ -1.54
HERC1-215ENST00000561436 CDK11AQ9UQ88 783 aaPredicted RBP5.46□□□□□ -1.54
HERC1-215ENST00000561436 ZNF451Q9Y4E5 1061 aa5.46□□□□□ -1.54
HERC1-215ENST00000561436 RAD54L2Q9Y4B4 1467 aa5.45□□□□□ -1.54
HERC1-215ENST00000561436 TARBP1Q13395 1621 aaKnown RBP5.45□□□□□ -1.54
HERC1-215ENST00000561436 H0Y8X5 98 aa5.45□□□□□ -1.54
HERC1-215ENST00000561436 AFMP43652 599 aa5.45□□□□□ -1.54
HERC1-215ENST00000561436 ZNF445P59923 1031 aa5.45□□□□□ -1.54
HERC1-215ENST00000561436 ZNF124Q15973 351 aa5.45□□□□□ -1.54
HERC1-215ENST00000561436 VHLLQ6RSH7 139 aa5.45□□□□□ -1.54
HERC1-215ENST00000561436 DAGLBQ8NCG7 672 aa5.45□□□□□ -1.54
HERC1-215ENST00000561436 ABHD4Q8TB40 342 aa5.45□□□□□ -1.54
HERC1-215ENST00000561436 MYLIPQ8WY64 445 aa5.45□□□□□ -1.54
HERC1-215ENST00000561436 SMARCC1Q92922 1105 aaPredicted RBP5.45□□□□□ -1.54
HERC1-215ENST00000561436 G6PC3Q9BUM1 346 aa5.45□□□□□ -1.54
HERC1-215ENST00000561436 DSCC1Q9BVC3 393 aa5.45□□□□□ -1.54
HERC1-215ENST00000561436 LGR4Q9BXB1 951 aa5.45□□□□□ -1.54
HERC1-215ENST00000561436 ST7Q9NRC1 585 aa5.45□□□□□ -1.54
HERC1-215ENST00000561436 ZMYM5Q9UJ78 669 aa5.45□□□□□ -1.54
HERC1-215ENST00000561436 SSU72P8A0A1W2PR75 194 aa5.44□□□□□ -1.54
HERC1-215ENST00000561436 LOC105371045A0A1W2PR82 267 aa5.44□□□□□ -1.54
HERC1-215ENST00000561436 LRRC10BA6NIK2 292 aa5.44□□□□□ -1.54
HERC1-215ENST00000561436 NOTOA8MTQ0 251 aa5.44□□□□□ -1.54
HERC1-215ENST00000561436 CBFA2T2O43439 604 aa5.44□□□□□ -1.54
HERC1-215ENST00000561436 PSPNO60542 156 aa5.44□□□□□ -1.54
HERC1-215ENST00000561436 CLSTN1O94985 981 aa5.44□□□□□ -1.54
HERC1-215ENST00000561436 HPXP02790 462 aa5.44□□□□□ -1.54
HERC1-215ENST00000561436 SDHBP21912 280 aa5.44□□□□□ -1.54
HERC1-215ENST00000561436 SLC7A5Q01650 507 aa5.44□□□□□ -1.54
HERC1-215ENST00000561436 PPP2R5DQ14738 602 aa5.44□□□□□ -1.54
HERC1-215ENST00000561436 GNPTABQ3T906 1256 aa5.44□□□□□ -1.54
HERC1-215ENST00000561436 TMEM67Q5HYA8 995 aa5.44□□□□□ -1.54
HERC1-215ENST00000561436 MPZL3Q6UWV2 235 aa5.44□□□□□ -1.54
HERC1-215ENST00000561436 EEPD1Q7L9B9 569 aa5.44□□□□□ -1.54
HERC1-215ENST00000561436 FAM178BQ8IXR5 827 aa5.44□□□□□ -1.54
HERC1-215ENST00000561436 FGD4Q96M96 766 aa5.44□□□□□ -1.54
HERC1-215ENST00000561436 AP5S1Q9NUS5 200 aa5.44□□□□□ -1.54
HERC1-215ENST00000561436 SNTG2Q9NY99 539 aa5.44□□□□□ -1.54
HERC1-215ENST00000561436 ZNF214Q9UL59 606 aaPredicted RBP5.44□□□□□ -1.54
HERC1-215ENST00000561436 NUP160Q12769 1436 aa5.43□□□□□ -1.54
HERC1-215ENST00000561436 B2RBV5 119 aa5.43□□□□□ -1.54
HERC1-215ENST00000561436 AGRPO00253 132 aa5.43□□□□□ -1.54
HERC1-215ENST00000561436 PDPK1O15530 556 aa5.43□□□□□ -1.54
HERC1-215ENST00000561436 SMARCA5O60264 1052 aaPredicted RBP5.43□□□□□ -1.54
HERC1-215ENST00000561436 GLI1P08151 1106 aa5.43□□□□□ -1.54
HERC1-215ENST00000561436 PCBP3P57721 371 aaKnown RBP5.43□□□□□ -1.54
HERC1-215ENST00000561436 RASGRF1Q13972 1273 aa5.43□□□□□ -1.54
HERC1-215ENST00000561436 C6orf15Q6UXA7 325 aaPredicted RBP5.43□□□□□ -1.54
HERC1-215ENST00000561436 KRTAP19-1Q8IUB9 90 aa5.43□□□□□ -1.54
HERC1-215ENST00000561436 ZNF655Q8N720 491 aaPredicted RBP5.43□□□□□ -1.54
HERC1-215ENST00000561436 KLHL6Q8WZ60 621 aa5.43□□□□□ -1.54
HERC1-215ENST00000561436 HHIPL1Q96JK4 782 aa5.43□□□□□ -1.54
HERC1-215ENST00000561436 ZDHHC15Q96MV8 337 aa5.43□□□□□ -1.54
HERC1-215ENST00000561436 KRTAP4-12Q9BQ66 201 aa5.43□□□□□ -1.54
HERC1-215ENST00000561436 CDADC1Q9BWV3 514 aa5.43□□□□□ -1.54
HERC1-215ENST00000561436 NOL6Q9H6R4 1146 aaKnown RBP5.43□□□□□ -1.54
HERC1-215ENST00000561436 GP6Q9HCN6 339 aa5.43□□□□□ -1.54
HERC1-215ENST00000561436 GPR160Q9UJ42 338 aa5.43□□□□□ -1.54
HERC1-215ENST00000561436 FGD5Q6ZNL6 1462 aa5.43□□□□□ -1.54
HERC1-215ENST00000561436 ABCA10Q8WWZ4 1543 aa5.43□□□□□ -1.54
HERC1-215ENST00000561436 FHAD1B1AJZ9 1412 aa5.42□□□□□ -1.54
HERC1-215ENST00000561436 WRNQ14191 1432 aaPredicted RBP eCLIP5.42□□□□□ -1.54
HERC1-215ENST00000561436 IQCA1LA6NCM1 817 aa5.42□□□□□ -1.54
HERC1-215ENST00000561436 GJB6O95452 261 aa5.42□□□□□ -1.54
HERC1-215ENST00000561436 EPHX1P07099 455 aa5.42□□□□□ -1.54
HERC1-215ENST00000561436 RAC2P15153 192 aa5.42□□□□□ -1.54
HERC1-215ENST00000561436 CD247P20963 164 aa5.42□□□□□ -1.54
HERC1-215ENST00000561436 CEBPAP49715 358 aaPredicted RBP5.42□□□□□ -1.54
HERC1-215ENST00000561436 ZNF143P52747 638 aaPredicted RBP5.42□□□□□ -1.54
HERC1-215ENST00000561436 RASA3Q14644 834 aa5.42□□□□□ -1.54
HERC1-215ENST00000561436 MTERF2Q49AM1 385 aa5.42□□□□□ -1.54
HERC1-215ENST00000561436 NOL9Q5SY16 702 aaKnown RBP5.42□□□□□ -1.54
HERC1-215ENST00000561436 RNF111Q6ZNA4 994 aa5.42□□□□□ -1.54
HERC1-215ENST00000561436 FIBCD1Q8N539 461 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms