RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 NFXL1Q6ZNB6 911 aa11.22□□□□□ -0.61
RABGGTA-221ENST00000561055 GPR142Q7Z601 462 aa11.22□□□□□ -0.61
RABGGTA-221ENST00000561055 ADGRF4Q8IZF3 695 aa11.22□□□□□ -0.61
RABGGTA-221ENST00000561055 FANCBQ8NB91 859 aa11.22□□□□□ -0.61
RABGGTA-221ENST00000561055 CTCFLQ8NI51 663 aaPredicted RBP11.22□□□□□ -0.61
RABGGTA-221ENST00000561055 USP6NLQ92738 828 aa11.22□□□□□ -0.61
RABGGTA-221ENST00000561055 COA7Q96BR5 231 aa11.22□□□□□ -0.61
RABGGTA-221ENST00000561055 KIF2CQ99661 725 aa11.22□□□□□ -0.61
RABGGTA-221ENST00000561055 LZTS2Q9BRK4 669 aa11.22□□□□□ -0.61
RABGGTA-221ENST00000561055 UBA5Q9GZZ9 404 aa11.22□□□□□ -0.61
RABGGTA-221ENST00000561055 JMJD4Q9H9V9 463 aa11.22□□□□□ -0.61
RABGGTA-221ENST00000561055 PTPN22Q9Y2R2 807 aa11.22□□□□□ -0.61
RABGGTA-221ENST00000561055 TRIM17Q9Y577 477 aa11.22□□□□□ -0.61
RABGGTA-221ENST00000561055 HTTP42858 3142 aa11.21□□□□□ -0.61
RABGGTA-221ENST00000561055 SLC15A5A6NIM6 579 aa11.21□□□□□ -0.61
RABGGTA-221ENST00000561055 ZBTB43O43298 467 aa11.21□□□□□ -0.61
RABGGTA-221ENST00000561055 CYTH3O43739 400 aa11.21□□□□□ -0.61
RABGGTA-221ENST00000561055 HOXC6P09630 235 aa11.21□□□□□ -0.61
RABGGTA-221ENST00000561055 XRCC5P13010 732 aaKnown RBP11.21□□□□□ -0.61
RABGGTA-221ENST00000561055 ERCC3P19447 782 aa11.21□□□□□ -0.61
RABGGTA-221ENST00000561055 SLC35G1Q2M3R5 365 aa11.21□□□□□ -0.61
RABGGTA-221ENST00000561055 FBXO46Q6PJ61 603 aaPredicted RBP11.21□□□□□ -0.61
RABGGTA-221ENST00000561055 PLEKHH3Q7Z736 793 aa11.21□□□□□ -0.61
RABGGTA-221ENST00000561055 CPXCR1Q8N123 301 aa11.21□□□□□ -0.61
RABGGTA-221ENST00000561055 CHST13Q8NET6 341 aa11.21□□□□□ -0.61
RABGGTA-221ENST00000561055 BRF1Q92994 677 aa11.21□□□□□ -0.61
RABGGTA-221ENST00000561055 CHMP4CQ96CF2 233 aa11.21□□□□□ -0.61
RABGGTA-221ENST00000561055 ZNF274Q96GC6 653 aaPredicted RBP11.21□□□□□ -0.61
RABGGTA-221ENST00000561055 SPZ1Q9BXG8 430 aa11.21□□□□□ -0.61
RABGGTA-221ENST00000561055 C22orf23Q9BZE7 217 aa11.21□□□□□ -0.61
RABGGTA-221ENST00000561055 UPF3BQ9BZI7 483 aaKnown RBP11.21□□□□□ -0.61
RABGGTA-221ENST00000561055 RAVER2Q9HCJ3 691 aaKnown RBP11.21□□□□□ -0.61
RABGGTA-221ENST00000561055 RBM28Q9NW13 759 aaKnown RBP11.21□□□□□ -0.61
RABGGTA-221ENST00000561055 FBXO40Q9UH90 709 aa11.21□□□□□ -0.61
RABGGTA-221ENST00000561055 RIPK3Q9Y572 518 aa11.21□□□□□ -0.61
RABGGTA-221ENST00000561055 CTDP1Q9Y5B0 961 aaPredicted RBP11.21□□□□□ -0.61
RABGGTA-221ENST00000561055 KIAA1217Q5T5P2 1943 aa11.2□□□□□ -0.62
RABGGTA-221ENST00000561055 KLF18A0A0U1RQI7 1052 aa11.2□□□□□ -0.62
RABGGTA-221ENST00000561055 FLT3LGP49771 235 aa11.2□□□□□ -0.62
RABGGTA-221ENST00000561055 FGD1P98174 961 aa11.2□□□□□ -0.62
RABGGTA-221ENST00000561055 APOBRQ0VD83 1088 aa11.2□□□□□ -0.62
RABGGTA-221ENST00000561055 GRB14Q14449 540 aa11.2□□□□□ -0.62
RABGGTA-221ENST00000561055 PLS1Q14651 629 aa11.2□□□□□ -0.62
RABGGTA-221ENST00000561055 SNRNP48Q6IEG0 339 aaKnown RBP11.2□□□□□ -0.62
RABGGTA-221ENST00000561055 SAMD1Q6SPF0 538 aaPredicted RBP11.2□□□□□ -0.62
RABGGTA-221ENST00000561055 NBPF11Q86T75 865 aa11.2□□□□□ -0.62
RABGGTA-221ENST00000561055 PXYLP1Q8TE99 480 aa11.2□□□□□ -0.62
RABGGTA-221ENST00000561055 NUP133Q8WUM0 1156 aa11.2□□□□□ -0.62
RABGGTA-221ENST00000561055 SOCS4Q8WXH5 440 aa11.2□□□□□ -0.62
RABGGTA-221ENST00000561055 NUDT12Q9BQG2 462 aa11.2□□□□□ -0.62
RABGGTA-221ENST00000561055 MYL10Q9BUA6 226 aa11.2□□□□□ -0.62
RABGGTA-221ENST00000561055 CPVLQ9H3G5 476 aa11.2□□□□□ -0.62
RABGGTA-221ENST00000561055 UPF2Q9HAU5 1272 aaKnown RBP11.2□□□□□ -0.62
RABGGTA-221ENST00000561055 FAM217BQ9NTX9 383 aaPredicted RBP11.2□□□□□ -0.62
RABGGTA-221ENST00000561055 PDRG1Q9NUG6 133 aa11.2□□□□□ -0.62
RABGGTA-221ENST00000561055 ISY1Q9ULR0 285 aaKnown RBP11.2□□□□□ -0.62
RABGGTA-221ENST00000561055 GABRQQ9UN88 632 aa11.2□□□□□ -0.62
RABGGTA-221ENST00000561055 HPS5Q9UPZ3 1129 aa11.2□□□□□ -0.62
RABGGTA-221ENST00000561055 DNAJC25-GNG10A0A024R161 153 aa11.19□□□□□ -0.62
RABGGTA-221ENST00000561055 IGHA2P01877 340 aa11.19□□□□□ -0.62
RABGGTA-221ENST00000561055 FCER1AP12319 257 aa11.19□□□□□ -0.62
RABGGTA-221ENST00000561055 PDIA3P30101 505 aaKnown RBP11.19□□□□□ -0.62
RABGGTA-221ENST00000561055 TRAF1Q13077 416 aa11.19□□□□□ -0.62
RABGGTA-221ENST00000561055 MAP2K5Q13163 448 aa11.19□□□□□ -0.62
RABGGTA-221ENST00000561055 ANKRD1Q15327 319 aa11.19□□□□□ -0.62
RABGGTA-221ENST00000561055 CDC37Q16543 378 aaPredicted RBP11.19□□□□□ -0.62
RABGGTA-221ENST00000561055 TMTC3Q6ZXV5 915 aa11.19□□□□□ -0.62
RABGGTA-221ENST00000561055 NCAPG2Q86XI2 1143 aa11.19□□□□□ -0.62
RABGGTA-221ENST00000561055 CCAR1Q8IX12 1150 aaKnown RBP11.19□□□□□ -0.62
RABGGTA-221ENST00000561055 SRBD1Q8N5C6 995 aaKnown RBP11.19□□□□□ -0.62
RABGGTA-221ENST00000561055 RGS22Q8NE09 1264 aa11.19□□□□□ -0.62
RABGGTA-221ENST00000561055 AGBL1Q96MI9 1066 aa11.19□□□□□ -0.62
RABGGTA-221ENST00000561055 TBC1D32Q96NH3 1257 aa11.19□□□□□ -0.62
RABGGTA-221ENST00000561055 DIS3Q9Y2L1 958 aaKnown RBP11.19□□□□□ -0.62
RABGGTA-221ENST00000561055 IVNS1ABPQ9Y6Y0 642 aa11.19□□□□□ -0.62
RABGGTA-221ENST00000561055 FRMPD3Q5JV73 1810 aa11.19□□□□□ -0.62
RABGGTA-221ENST00000561055 CENPFP49454 3210 aa11.18□□□□□ -0.62
RABGGTA-221ENST00000561055 PNMA6FA0A0J9YX94 578 aa11.18□□□□□ -0.62
RABGGTA-221ENST00000561055 CCDC196A0A1B0GTZ2 297 aa11.18□□□□□ -0.62
RABGGTA-221ENST00000561055 ZBTB5O15062 677 aa11.18□□□□□ -0.62
RABGGTA-221ENST00000561055 CDC27P30260 824 aa11.18□□□□□ -0.62
RABGGTA-221ENST00000561055 NEK4P51957 841 aa11.18□□□□□ -0.62
RABGGTA-221ENST00000561055 SNAP25P60880 206 aa11.18□□□□□ -0.62
RABGGTA-221ENST00000561055 GHRHRQ02643 423 aa11.18□□□□□ -0.62
RABGGTA-221ENST00000561055 PRKCZQ05513 592 aa11.18□□□□□ -0.62
RABGGTA-221ENST00000561055 FUT2Q10981 343 aa11.18□□□□□ -0.62
RABGGTA-221ENST00000561055 RTN1Q16799 776 aa11.18□□□□□ -0.62
RABGGTA-221ENST00000561055 QRICH1Q2TAL8 776 aa11.18□□□□□ -0.62
RABGGTA-221ENST00000561055 MICU3Q86XE3 530 aa11.18□□□□□ -0.62
RABGGTA-221ENST00000561055 TRMT44Q8IYL2 757 aaKnown RBP11.18□□□□□ -0.62
RABGGTA-221ENST00000561055 SAMD3Q8N6K7 520 aa11.18□□□□□ -0.62
RABGGTA-221ENST00000561055 TRERF1Q96PN7 1200 aa11.18□□□□□ -0.62
RABGGTA-221ENST00000561055 AMNQ9BXJ7 453 aa11.18□□□□□ -0.62
RABGGTA-221ENST00000561055 MCOLN1Q9GZU1 580 aa11.18□□□□□ -0.62
RABGGTA-221ENST00000561055 ACAD9Q9H845 621 aa11.18□□□□□ -0.62
RABGGTA-221ENST00000561055 CCPG1Q9ULG6 757 aa11.18□□□□□ -0.62
RABGGTA-221ENST00000561055 ABCB11O95342 1321 aa11.17□□□□□ -0.62
RABGGTA-221ENST00000561055 PLEKHA8P1O95397 391 aa11.17□□□□□ -0.62
RABGGTA-221ENST00000561055 SLC34A2O95436 690 aa11.17□□□□□ -0.62
RABGGTA-221ENST00000561055 ALAS1P13196 640 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms