RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 EPS15P42566 896 aa19.54■□□□□ 0.72
HDDC3-206ENST00000561036 MRPL12P52815 198 aaKnown RBP19.54■□□□□ 0.72
HDDC3-206ENST00000561036 NONOQ15233 471 aaKnown RBP eCLIP19.54■□□□□ 0.72
HDDC3-206ENST00000561036 ZNF174Q15697 407 aa19.54■□□□□ 0.72
HDDC3-206ENST00000561036 CAMK4Q16566 473 aa19.54■□□□□ 0.72
HDDC3-206ENST00000561036 QRICH1Q2TAL8 776 aa19.54■□□□□ 0.72
HDDC3-206ENST00000561036 ARL6IP4Q66PJ3 421 aaKnown RBP19.54■□□□□ 0.72
HDDC3-206ENST00000561036 MCTP2Q6DN12 878 aa19.54■□□□□ 0.72
HDDC3-206ENST00000561036 COA7Q96BR5 231 aa19.54■□□□□ 0.72
HDDC3-206ENST00000561036 RBSNQ9H1K0 784 aa19.54■□□□□ 0.72
HDDC3-206ENST00000561036 ADARB2Q9NS39 739 aaKnown RBP19.54■□□□□ 0.72
HDDC3-206ENST00000561036 ZNF112Q9UJU3 913 aa19.54■□□□□ 0.72
HDDC3-206ENST00000561036 TMEM232C9JQI7 657 aa19.53■□□□□ 0.72
HDDC3-206ENST00000561036 LAD1O00515 517 aa19.53■□□□□ 0.72
HDDC3-206ENST00000561036 PPP1R11O60927 126 aaPredicted RBP19.53■□□□□ 0.72
HDDC3-206ENST00000561036 ZNF202O95125 648 aa19.53■□□□□ 0.72
HDDC3-206ENST00000561036 ECE1P42892 770 aa19.53■□□□□ 0.72
HDDC3-206ENST00000561036 SYKP43405 635 aa19.53■□□□□ 0.72
HDDC3-206ENST00000561036 CDC37Q16543 378 aaPredicted RBP19.53■□□□□ 0.72
HDDC3-206ENST00000561036 NBPF12Q5TAG4 269 aaPredicted RBP19.53■□□□□ 0.72
HDDC3-206ENST00000561036 C9orf131Q5VYM1 1079 aa19.53■□□□□ 0.72
HDDC3-206ENST00000561036 FAM160B2Q86V87 743 aa19.53■□□□□ 0.72
HDDC3-206ENST00000561036 ELOA2Q8IYF1 753 aaPredicted RBP19.53■□□□□ 0.72
HDDC3-206ENST00000561036 RASGRP4Q8TDF6 673 aa19.53■□□□□ 0.72
HDDC3-206ENST00000561036 CHURC1Q8WUH1 139 aa19.53■□□□□ 0.72
HDDC3-206ENST00000561036 CUL5Q93034 780 aa19.53■□□□□ 0.72
HDDC3-206ENST00000561036 CLIC6Q96NY7 704 aa19.53■□□□□ 0.72
HDDC3-206ENST00000561036 STAT2P52630 851 aa19.52■□□□□ 0.72
HDDC3-206ENST00000561036 IKQ13123 557 aaPredicted RBP19.52■□□□□ 0.72
HDDC3-206ENST00000561036 PTGDRQ13258 359 aa19.52■□□□□ 0.72
HDDC3-206ENST00000561036 ILDR2Q71H61 639 aa19.52■□□□□ 0.72
HDDC3-206ENST00000561036 NUP88Q99567 741 aaPredicted RBP19.52■□□□□ 0.72
HDDC3-206ENST00000561036 SDF4Q9BRK5 362 aa19.52■□□□□ 0.72
HDDC3-206ENST00000561036 AMNQ9BXJ7 453 aa19.52■□□□□ 0.72
HDDC3-206ENST00000561036 KCNH3Q9ULD8 1083 aa19.52■□□□□ 0.72
HDDC3-206ENST00000561036 ZC3H4Q9UPT8 1303 aaKnown RBP19.51■□□□□ 0.71
HDDC3-206ENST00000561036 ATAD5Q96QE3 1844 aa19.51■□□□□ 0.71
HDDC3-206ENST00000561036 DDNO94850 711 aaPredicted RBP19.51■□□□□ 0.71
HDDC3-206ENST00000561036 CAVIN2O95810 425 aa19.51■□□□□ 0.71
HDDC3-206ENST00000561036 HIRAP54198 1017 aaPredicted RBP19.51■□□□□ 0.71
HDDC3-206ENST00000561036 SUPT20HL1Q3ZLR7 823 aa19.51■□□□□ 0.71
HDDC3-206ENST00000561036 SASS6Q6UVJ0 657 aa19.51■□□□□ 0.71
HDDC3-206ENST00000561036 FBXO11Q86XK2 927 aa19.51■□□□□ 0.71
HDDC3-206ENST00000561036 C4orf32Q8N8J7 132 aa19.51■□□□□ 0.71
HDDC3-206ENST00000561036 LPAR1Q92633 364 aa19.51■□□□□ 0.71
HDDC3-206ENST00000561036 KIAA1683Q9H0B3 1180 aa19.51■□□□□ 0.71
HDDC3-206ENST00000561036 GGA3Q9NZ52 723 aa19.51■□□□□ 0.71
HDDC3-206ENST00000561036 FEM1BQ9UK73 627 aa19.51■□□□□ 0.71
HDDC3-206ENST00000561036 WNT7AO00755 349 aa19.5■□□□□ 0.71
HDDC3-206ENST00000561036 MCM7P33993 719 aa19.5■□□□□ 0.71
HDDC3-206ENST00000561036 CLK2P49760 499 aaKnown RBP19.5■□□□□ 0.71
HDDC3-206ENST00000561036 TYRO3Q06418 890 aa19.5■□□□□ 0.71
HDDC3-206ENST00000561036 INF2Q27J81 1249 aa19.5■□□□□ 0.71
HDDC3-206ENST00000561036 UVSSAQ2YD98 709 aa19.5■□□□□ 0.71
HDDC3-206ENST00000561036 DPY19L2Q6NUT2 758 aa19.5■□□□□ 0.71
HDDC3-206ENST00000561036 NEK8Q86SG6 692 aa19.5■□□□□ 0.71
HDDC3-206ENST00000561036 PSTPIP2Q9H939 334 aa19.5■□□□□ 0.71
HDDC3-206ENST00000561036 PRR12Q9ULL5 1215 aa19.5■□□□□ 0.71
HDDC3-206ENST00000561036 SCAF8Q9UPN6 1271 aaKnown RBP19.5■□□□□ 0.71
HDDC3-206ENST00000561036 PCDHA1Q9Y5I3 950 aa19.5■□□□□ 0.71
HDDC3-206ENST00000561036 PRPHP41219 470 aa19.49■□□□□ 0.71
HDDC3-206ENST00000561036 KIAA1755Q5JYT7 1200 aa19.49■□□□□ 0.71
HDDC3-206ENST00000561036 FAM83BQ5T0W9 1011 aa19.49■□□□□ 0.71
HDDC3-206ENST00000561036 CKAP2LQ8IYA6 745 aa19.49■□□□□ 0.71
HDDC3-206ENST00000561036 SCYL3Q8IZE3 742 aa19.49■□□□□ 0.71
HDDC3-206ENST00000561036 SPICE1Q8N0Z3 855 aa19.49■□□□□ 0.71
HDDC3-206ENST00000561036 L3MBTL3Q96JM7 780 aaPredicted RBP19.49■□□□□ 0.71
HDDC3-206ENST00000561036 PYM1Q9BRP8 204 aaKnown RBP19.49■□□□□ 0.71
HDDC3-206ENST00000561036 WDR18Q9BV38 432 aa19.49■□□□□ 0.71
HDDC3-206ENST00000561036 CSRNP2Q9H175 543 aa19.49■□□□□ 0.71
HDDC3-206ENST00000561036 BIN2Q9UBW5 565 aaPredicted RBP19.49■□□□□ 0.71
HDDC3-206ENST00000561036 WDR46O15213 610 aaKnown RBP19.48■□□□□ 0.71
HDDC3-206ENST00000561036 LONP1P36776 959 aaKnown RBP19.48■□□□□ 0.71
HDDC3-206ENST00000561036 JAKMIP3Q5VZ66 844 aa19.48■□□□□ 0.71
HDDC3-206ENST00000561036 KANK3Q6NY19 840 aa19.48■□□□□ 0.71
HDDC3-206ENST00000561036 FEZ1Q99689 392 aa19.48■□□□□ 0.71
HDDC3-206ENST00000561036 NAP1L4Q99733 375 aaKnown RBP19.48■□□□□ 0.71
HDDC3-206ENST00000561036 AS3MTQ9HBK9 375 aa19.48■□□□□ 0.71
HDDC3-206ENST00000561036 USP25Q9UHP3 1055 aa19.48■□□□□ 0.71
HDDC3-206ENST00000561036 HOOK1Q9UJC3 728 aaKnown RBP19.48■□□□□ 0.71
HDDC3-206ENST00000561036 GRIN3BO60391 1043 aa19.47■□□□□ 0.71
HDDC3-206ENST00000561036 USP14P54578 494 aa19.47■□□□□ 0.71
HDDC3-206ENST00000561036 GRIN1Q05586 938 aa19.47■□□□□ 0.71
HDDC3-206ENST00000561036 NOL9Q5SY16 702 aaKnown RBP19.47■□□□□ 0.71
HDDC3-206ENST00000561036 KRBA2Q6ZNG9 492 aa19.47■□□□□ 0.71
HDDC3-206ENST00000561036 TBCKQ8TEA7 893 aa19.47■□□□□ 0.71
HDDC3-206ENST00000561036 ANP32BQ92688 251 aaKnown RBP19.47■□□□□ 0.71
HDDC3-206ENST00000561036 CCDC34Q96HJ3 373 aa19.47■□□□□ 0.71
HDDC3-206ENST00000561036 RANBP17Q9H2T7 1088 aaKnown RBP19.47■□□□□ 0.71
HDDC3-206ENST00000561036 PICK1Q9NRD5 415 aa19.47■□□□□ 0.71
HDDC3-206ENST00000561036 DOCK1Q14185 1865 aa19.47■□□□□ 0.71
HDDC3-206ENST00000561036 INPP5BP32019 993 aa19.46■□□□□ 0.71
HDDC3-206ENST00000561036 AP3B2Q13367 1082 aa19.46■□□□□ 0.71
HDDC3-206ENST00000561036 STX1AQ16623 288 aa19.46■□□□□ 0.71
HDDC3-206ENST00000561036 DTHD1Q6ZMT9 781 aa19.46■□□□□ 0.71
HDDC3-206ENST00000561036 USP50Q70EL3 339 aaPredicted RBP19.46■□□□□ 0.71
HDDC3-206ENST00000561036 DCPSQ96C86 337 aaKnown RBP19.46■□□□□ 0.71
HDDC3-206ENST00000561036 GLIS2Q9BZE0 524 aaPredicted RBP19.46■□□□□ 0.71
HDDC3-206ENST00000561036 TMEM260Q9NX78 707 aa19.46■□□□□ 0.71
HDDC3-206ENST00000561036 KIAA1468Q9P260 1216 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms