RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 FNBP4Q8N3X1 1017 aaPredicted RBP18.39■□□□□ 0.53
TPM1-228ENST00000560975 IFT81Q8WYA0 676 aa18.39■□□□□ 0.53
TPM1-228ENST00000560975 CCDC42Q96M95 316 aa18.39■□□□□ 0.53
TPM1-228ENST00000560975 RIPOR2Q9Y4F9 1068 aa18.39■□□□□ 0.53
TPM1-228ENST00000560975 ABCC12Q96J65 1359 aa18.39■□□□□ 0.53
TPM1-228ENST00000560975 TJP1Q07157 1748 aa18.39■□□□□ 0.53
TPM1-228ENST00000560975 RASSF10A6NK89 507 aa18.38■□□□□ 0.53
TPM1-228ENST00000560975 TACC1O75410 805 aa18.38■□□□□ 0.53
TPM1-228ENST00000560975 VAV2P52735 878 aa18.38■□□□□ 0.53
TPM1-228ENST00000560975 IFT88Q13099 833 aa18.38■□□□□ 0.53
TPM1-228ENST00000560975 ALX1Q15699 326 aa18.38■□□□□ 0.53
TPM1-228ENST00000560975 PIK3AP1Q6ZUJ8 805 aa18.38■□□□□ 0.53
TPM1-228ENST00000560975 ANKRD13CQ8N6S4 541 aa18.38■□□□□ 0.53
TPM1-228ENST00000560975 TTLL11Q8NHH1 800 aa18.38■□□□□ 0.53
TPM1-228ENST00000560975 RASSF8Q8NHQ8 419 aa18.38■□□□□ 0.53
TPM1-228ENST00000560975 ZKSCAN4Q969J2 545 aaPredicted RBP18.38■□□□□ 0.53
TPM1-228ENST00000560975 OSBPL9Q96SU4 736 aa18.38■□□□□ 0.53
TPM1-228ENST00000560975 GREM2Q9H772 168 aa18.38■□□□□ 0.53
TPM1-228ENST00000560975 RMND1Q9NWS8 449 aa18.38■□□□□ 0.53
TPM1-228ENST00000560975 SLC4A4Q9Y6R1 1079 aa18.38■□□□□ 0.53
TPM1-228ENST00000560975 PDS5AQ29RF7 1337 aaKnown RBP18.38■□□□□ 0.53
TPM1-228ENST00000560975 RIC1Q4ADV7 1423 aa18.38■□□□□ 0.53
TPM1-228ENST00000560975 ZSCAN5CA6NGD5 496 aaPredicted RBP18.38■□□□□ 0.53
TPM1-228ENST00000560975 MINDY4BA8MYZ0 360 aa18.38■□□□□ 0.53
TPM1-228ENST00000560975 FAM153BP0C7A2 387 aa18.38■□□□□ 0.53
TPM1-228ENST00000560975 EPB41P11171 864 aaKnown RBP18.38■□□□□ 0.53
TPM1-228ENST00000560975 ITGA6P23229 1130 aa18.38■□□□□ 0.53
TPM1-228ENST00000560975 GUCY2FP51841 1108 aa18.38■□□□□ 0.53
TPM1-228ENST00000560975 ATP2C1P98194 919 aaPredicted RBP18.38■□□□□ 0.53
TPM1-228ENST00000560975 ACTN3Q08043 901 aaPredicted RBP18.38■□□□□ 0.53
TPM1-228ENST00000560975 FAM153CQ494X1 144 aa18.38■□□□□ 0.53
TPM1-228ENST00000560975 TYW1BQ6NUM6 668 aa18.38■□□□□ 0.53
TPM1-228ENST00000560975 C8orf74Q6P047 294 aa18.38■□□□□ 0.53
TPM1-228ENST00000560975 EMBQ6PCB8 327 aa18.38■□□□□ 0.53
TPM1-228ENST00000560975 ADSSL1Q8N142 457 aa18.38■□□□□ 0.53
TPM1-228ENST00000560975 MIGA1Q8NAN2 632 aa18.38■□□□□ 0.53
TPM1-228ENST00000560975 ZNF473Q8WTR7 871 aaKnown RBP18.38■□□□□ 0.53
TPM1-228ENST00000560975 RNF26Q9BY78 433 aaPredicted RBP18.38■□□□□ 0.53
TPM1-228ENST00000560975 FAM153AQ9UHL3 310 aa18.38■□□□□ 0.53
TPM1-228ENST00000560975 NFU1Q9UMS0 254 aa18.38■□□□□ 0.53
TPM1-228ENST00000560975 MYH10P35580 1976 aa18.37■□□□□ 0.53
TPM1-228ENST00000560975 NUTM2BA6NNL0 878 aaPredicted RBP18.37■□□□□ 0.53
TPM1-228ENST00000560975 NUTM2EB1AL46 878 aaPredicted RBP18.37■□□□□ 0.53
TPM1-228ENST00000560975 SNAP23O00161 211 aa18.37■□□□□ 0.53
TPM1-228ENST00000560975 ZPR1O75312 459 aa18.37■□□□□ 0.53
TPM1-228ENST00000560975 STAT6P42226 847 aa18.37■□□□□ 0.53
TPM1-228ENST00000560975 HDLBPQ00341 1268 aaKnown RBP18.37■□□□□ 0.53
TPM1-228ENST00000560975 CFAP58Q5T655 872 aa18.37■□□□□ 0.53
TPM1-228ENST00000560975 LCORLQ8N3X6 602 aa18.37■□□□□ 0.53
TPM1-228ENST00000560975 PURBQ96QR8 312 aaKnown RBP18.37■□□□□ 0.53
TPM1-228ENST00000560975 TUBGCP2Q9BSJ2 902 aa18.37■□□□□ 0.53
TPM1-228ENST00000560975 EXOC1Q9NV70 894 aa18.37■□□□□ 0.53
TPM1-228ENST00000560975 ATRNO75882 1429 aa18.37■□□□□ 0.53
TPM1-228ENST00000560975 DNM2P50570 870 aa18.37■□□□□ 0.53
TPM1-228ENST00000560975 TRIM58Q8NG06 486 aa18.37■□□□□ 0.53
TPM1-228ENST00000560975 RBM12Q9NTZ6 932 aaKnown RBP18.37■□□□□ 0.53
TPM1-228ENST00000560975 AKAP11Q9UKA4 1901 aa18.37■□□□□ 0.53
TPM1-228ENST00000560975 BMP15O95972 392 aa18.36■□□□□ 0.53
TPM1-228ENST00000560975 CARSP49589 748 aaKnown RBP18.36■□□□□ 0.53
TPM1-228ENST00000560975 SF3B2Q13435 895 aaKnown RBP18.36■□□□□ 0.53
TPM1-228ENST00000560975 ZNF662Q6ZS27 426 aa18.36■□□□□ 0.53
TPM1-228ENST00000560975 MS4A14Q96JA4 679 aa18.36■□□□□ 0.53
TPM1-228ENST00000560975 IFIH1Q9BYX4 1025 aaKnown RBP18.36■□□□□ 0.53
TPM1-228ENST00000560975 EPN3Q9H201 632 aa18.36■□□□□ 0.53
TPM1-228ENST00000560975 TNKSO95271 1327 aa18.36■□□□□ 0.53
TPM1-228ENST00000560975 PKD1L3Q7Z443 1732 aa18.36■□□□□ 0.53
TPM1-228ENST00000560975 PHRF1Q9P1Y6 1649 aaKnown RBP18.36■□□□□ 0.53
TPM1-228ENST00000560975 ZNF233A6NK53 670 aa18.36■□□□□ 0.53
TPM1-228ENST00000560975 SSBP05455 408 aaKnown RBP eCLIP18.36■□□□□ 0.53
TPM1-228ENST00000560975 SCP2P22307 547 aa18.36■□□□□ 0.53
TPM1-228ENST00000560975 EEF1GP26641 437 aaKnown RBP18.36■□□□□ 0.53
TPM1-228ENST00000560975 MICALCLQ6ZW33 695 aa18.36■□□□□ 0.53
TPM1-228ENST00000560975 CCDC170Q8IYT3 715 aa18.36■□□□□ 0.53
TPM1-228ENST00000560975 KLC4Q9NSK0 619 aa18.36■□□□□ 0.53
TPM1-228ENST00000560975 FBXO3Q9UK99 471 aa18.36■□□□□ 0.53
TPM1-228ENST00000560975 SPATA31A3Q5VYP0 1347 aa18.36■□□□□ 0.53
TPM1-228ENST00000560975 ADAMTS3O15072 1205 aa18.36■□□□□ 0.53
TPM1-228ENST00000560975 USO1O60763 962 aaKnown RBP18.36■□□□□ 0.53
TPM1-228ENST00000560975 SRGNP10124 158 aa18.36■□□□□ 0.53
TPM1-228ENST00000560975 ZBED6P86452 979 aa18.36■□□□□ 0.53
TPM1-228ENST00000560975 STAG1Q8WVM7 1258 aa18.36■□□□□ 0.53
TPM1-228ENST00000560975 ISCA1Q9BUE6 129 aa18.36■□□□□ 0.53
TPM1-228ENST00000560975 TTYH3Q9C0H2 523 aa18.36■□□□□ 0.53
TPM1-228ENST00000560975 MYH13Q9UKX3 1938 aa18.36■□□□□ 0.53
TPM1-228ENST00000560975 NID2Q14112 1375 aa18.35■□□□□ 0.53
TPM1-228ENST00000560975 NKRFO15226 690 aaKnown RBP eCLIP18.35■□□□□ 0.531e-6■■□□□ 14
TPM1-228ENST00000560975 TMTC2Q8N394 836 aa18.35■□□□□ 0.53
TPM1-228ENST00000560975 CSGALNACT2Q8N6G5 542 aa18.35■□□□□ 0.53
TPM1-228ENST00000560975 CCT8L2Q96SF2 557 aa18.35■□□□□ 0.53
TPM1-228ENST00000560975 CHUKO15111 745 aa18.35■□□□□ 0.53
TPM1-228ENST00000560975 NR1D1P20393 614 aa18.35■□□□□ 0.53
TPM1-228ENST00000560975 HPDP32754 393 aaPredicted RBP18.35■□□□□ 0.53
TPM1-228ENST00000560975 PAFAH1B1P43034 410 aa18.35■□□□□ 0.53
TPM1-228ENST00000560975 MTIF2P46199 727 aaKnown RBP18.35■□□□□ 0.53
TPM1-228ENST00000560975 CHRNA2Q15822 529 aa18.35■□□□□ 0.53
TPM1-228ENST00000560975 CCDC40Q4G0X9 1142 aa18.35■□□□□ 0.53
TPM1-228ENST00000560975 NLRP14Q86W24 1093 aa18.35■□□□□ 0.53
TPM1-228ENST00000560975 CCDC13Q8IYE1 715 aa18.35■□□□□ 0.53
TPM1-228ENST00000560975 NACAP1Q9BZK3 213 aa18.35■□□□□ 0.53
TPM1-228ENST00000560975 PPANQ9NQ55 473 aaKnown RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms