RNA–Protein interactions for RNA: ENST00000560945.1

SNX22-205, Transcript of sorting nexin 22, humanhuman

TSL 1 (best)

Gene SNX22, Length 1,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-205ENST00000560945 PPP1R12BO60237 982 aaPredicted RBP25.63■■□□□ 1.69
SNX22-205ENST00000560945 UBE2HP62256 183 aa25.63■■□□□ 1.69
SNX22-205ENST00000560945 AS3MTQ9HBK9 375 aa25.63■■□□□ 1.69
SNX22-205ENST00000560945 NMRK2Q9NPI5 230 aa25.63■■□□□ 1.69
SNX22-205ENST00000560945 hCG_1984214I3L0E3 225 aa25.62■■□□□ 1.69
SNX22-205ENST00000560945 VCAM1P19320 739 aa25.62■■□□□ 1.69
SNX22-205ENST00000560945 BACE1P56817 501 aa25.62■■□□□ 1.69
SNX22-205ENST00000560945 STK38Q15208 465 aa25.62■■□□□ 1.69
SNX22-205ENST00000560945 PTPAQ15257 358 aa25.62■■□□□ 1.69
SNX22-205ENST00000560945 SKOR2Q2VWA4 1001 aaPredicted RBP25.62■■□□□ 1.69
SNX22-205ENST00000560945 ZNF713Q8N859 430 aaPredicted RBP25.62■■□□□ 1.69
SNX22-205ENST00000560945 TMEM260Q9NX78 707 aa25.62■■□□□ 1.69
SNX22-205ENST00000560945 TTLL12Q14166 644 aaPredicted RBP25.61■■□□□ 1.69
SNX22-205ENST00000560945 CCDC12Q8WUD4 166 aaPredicted RBP25.61■■□□□ 1.69
SNX22-205ENST00000560945 ELP3Q9H9T3 547 aa25.61■■□□□ 1.69
SNX22-205ENST00000560945 C6orf50Q9HD87 102 aa25.61■■□□□ 1.69
SNX22-205ENST00000560945 AFG3L2Q9Y4W6 797 aa25.61■■□□□ 1.69
SNX22-205ENST00000560945 WDR46O15213 610 aaKnown RBP25.6■■□□□ 1.69
SNX22-205ENST00000560945 HMGCS2P54868 508 aa25.6■■□□□ 1.69
SNX22-205ENST00000560945 USH1GQ495M9 461 aa25.6■■□□□ 1.69
SNX22-205ENST00000560945 LPAR1Q92633 364 aa25.6■■□□□ 1.69
SNX22-205ENST00000560945 FEM1BQ9UK73 627 aa25.6■■□□□ 1.69
SNX22-205ENST00000560945 ESYT2A0FGR8 921 aa25.6■■□□□ 1.69
SNX22-205ENST00000560945 YEATS4O95619 227 aa25.6■■□□□ 1.69
SNX22-205ENST00000560945 NF2P35240 595 aa25.6■■□□□ 1.69
SNX22-205ENST00000560945 IREB2P48200 963 aaKnown RBP25.6■■□□□ 1.69
SNX22-205ENST00000560945 RILPL1Q5EBL4 403 aa25.6■■□□□ 1.69
SNX22-205ENST00000560945 RPAP3Q9H6T3 665 aaPredicted RBP25.6■■□□□ 1.69
SNX22-205ENST00000560945 BIN2Q9UBW5 565 aaPredicted RBP25.6■■□□□ 1.69
SNX22-205ENST00000560945 PCDHA1Q9Y5I3 950 aa25.6■■□□□ 1.69
SNX22-205ENST00000560945 MARCKSP29966 332 aaPredicted RBP25.59■■□□□ 1.69
SNX22-205ENST00000560945 UBE2SQ16763 222 aa25.59■■□□□ 1.69
SNX22-205ENST00000560945 GALNT17Q6IS24 598 aa25.59■■□□□ 1.69
SNX22-205ENST00000560945 CAVIN1Q6NZI2 390 aaKnown RBP25.59■■□□□ 1.69
SNX22-205ENST00000560945 CCDC174Q6PII3 467 aa25.59■■□□□ 1.69
SNX22-205ENST00000560945 CHURC1Q8WUH1 139 aa25.59■■□□□ 1.69
SNX22-205ENST00000560945 ZNF408Q9H9D4 720 aa25.59■■□□□ 1.69
SNX22-205ENST00000560945 PCDHA7Q9UN72 937 aa25.59■■□□□ 1.69
SNX22-205ENST00000560945 MRVI1Q9Y6F6 885 aa25.59■■□□□ 1.69
SNX22-205ENST00000560945 SPTLC2O15270 562 aa25.58■■□□□ 1.69
SNX22-205ENST00000560945 ADCY7P51828 1080 aa25.58■■□□□ 1.69
SNX22-205ENST00000560945 SLC39A14Q15043 492 aa25.58■■□□□ 1.69
SNX22-205ENST00000560945 JAKMIP3Q5VZ66 844 aa25.58■■□□□ 1.69
SNX22-205ENST00000560945 FAM160B2Q86V87 743 aa25.58■■□□□ 1.69
SNX22-205ENST00000560945 FBXO11Q86XK2 927 aa25.58■■□□□ 1.69
SNX22-205ENST00000560945 TANGO6Q9C0B7 1094 aa25.58■■□□□ 1.69
SNX22-205ENST00000560945 CSADQ9Y600 493 aa25.58■■□□□ 1.69
SNX22-205ENST00000560945 PLA2G6O60733 806 aa25.58■■□□□ 1.68
SNX22-205ENST00000560945 GNA11P29992 359 aa25.58■■□□□ 1.68
SNX22-205ENST00000560945 ME1P48163 572 aa25.58■■□□□ 1.68
SNX22-205ENST00000560945 USP14P54578 494 aa25.58■■□□□ 1.68
SNX22-205ENST00000560945 PPP1R18Q6NYC8 613 aa25.58■■□□□ 1.68
SNX22-205ENST00000560945 FAM177A1Q8N128 213 aaPredicted RBP25.58■■□□□ 1.68
SNX22-205ENST00000560945 AMNQ9BXJ7 453 aa25.58■■□□□ 1.68
SNX22-205ENST00000560945 RANBP17Q9H2T7 1088 aaKnown RBP25.58■■□□□ 1.68
SNX22-205ENST00000560945 MBD3O95983 291 aa25.57■■□□□ 1.68
SNX22-205ENST00000560945 LIG1P18858 919 aa25.57■■□□□ 1.68
SNX22-205ENST00000560945 RIC8AQ9NPQ8 531 aa25.57■■□□□ 1.68
SNX22-205ENST00000560945 TMEM63CQ9P1W3 806 aa25.57■■□□□ 1.68
SNX22-205ENST00000560945 ZNF174Q15697 407 aa25.56■■□□□ 1.68
SNX22-205ENST00000560945 INF2Q27J81 1249 aa25.56■■□□□ 1.68
SNX22-205ENST00000560945 CCDC194A0A1B0GVG4 234 aa25.56■■□□□ 1.68
SNX22-205ENST00000560945 MAP3K11Q16584 847 aa25.56■■□□□ 1.68
SNX22-205ENST00000560945 TTC38Q5R3I4 469 aa25.56■■□□□ 1.68
SNX22-205ENST00000560945 ANKRD13AQ8IZ07 590 aa25.56■■□□□ 1.68
SNX22-205ENST00000560945 REXO1Q8N1G1 1221 aaKnown RBP25.56■■□□□ 1.68
SNX22-205ENST00000560945 C12orf42Q96LP6 360 aa25.56■■□□□ 1.68
SNX22-205ENST00000560945 SLF1Q9BQI6 1058 aa25.56■■□□□ 1.68
SNX22-205ENST00000560945 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.56■■□□□ 1.68
SNX22-205ENST00000560945 KCNG4Q8TDN1 519 aa25.55■■□□□ 1.68
SNX22-205ENST00000560945 OTUD5Q96G74 571 aa25.55■■□□□ 1.68
SNX22-205ENST00000560945 NOL7Q9UMY1 257 aaKnown RBP25.55■■□□□ 1.68
SNX22-205ENST00000560945 GOLGA6L4A6NEF3 574 aa25.54■■□□□ 1.68
SNX22-205ENST00000560945 OPLAHO14841 1288 aa25.54■■□□□ 1.68
SNX22-205ENST00000560945 FLOT1O75955 427 aa25.54■■□□□ 1.68
SNX22-205ENST00000560945 BICD2Q8TD16 824 aa25.54■■□□□ 1.68
SNX22-205ENST00000560945 WNK4Q96J92 1243 aa25.54■■□□□ 1.68
SNX22-205ENST00000560945 GOLPH3LQ9H4A5 285 aa25.54■■□□□ 1.68
SNX22-205ENST00000560945 PSTPIP2Q9H939 334 aa25.54■■□□□ 1.68
SNX22-205ENST00000560945 USP17L15C9J2P7 530 aa25.53■■□□□ 1.68
SNX22-205ENST00000560945 C19orf81C9J6K1 198 aa25.53■■□□□ 1.68
SNX22-205ENST00000560945 USP17L13C9JLJ4 530 aa25.53■■□□□ 1.68
SNX22-205ENST00000560945 USP17L11C9JVI0 530 aa25.53■■□□□ 1.68
SNX22-205ENST00000560945 USP17L18D6R9N7 530 aa25.53■■□□□ 1.68
SNX22-205ENST00000560945 USP17L22D6RA61 530 aa25.53■■□□□ 1.68
SNX22-205ENST00000560945 USP17L17D6RBQ6 530 aa25.53■■□□□ 1.68
SNX22-205ENST00000560945 USP17L19D6RCP7 530 aa25.53■■□□□ 1.68
SNX22-205ENST00000560945 USP17L20D6RJB6 530 aa25.53■■□□□ 1.68
SNX22-205ENST00000560945 CLK2P49760 499 aaKnown RBP25.53■■□□□ 1.68
SNX22-205ENST00000560945 USP17L24Q0WX57 530 aa25.53■■□□□ 1.68
SNX22-205ENST00000560945 AXDND1Q5T1B0 1012 aaPredicted RBP25.53■■□□□ 1.68
SNX22-205ENST00000560945 USP17L6PQ6QN14 398 aa25.53■■□□□ 1.68
SNX22-205ENST00000560945 CLIC6Q96NY7 704 aa25.53■■□□□ 1.68
SNX22-205ENST00000560945 GRIN1Q05586 938 aa25.53■■□□□ 1.68
SNX22-205ENST00000560945 KRT25Q7Z3Z0 450 aa25.53■■□□□ 1.68
SNX22-205ENST00000560945 LDHDQ86WU2 507 aa25.53■■□□□ 1.68
SNX22-205ENST00000560945 PRPF38AQ8NAV1 312 aaKnown RBP25.53■■□□□ 1.68
SNX22-205ENST00000560945 CUL5Q93034 780 aa25.53■■□□□ 1.68
SNX22-205ENST00000560945 GPBP1L1Q9HC44 474 aaPredicted RBP25.53■■□□□ 1.68
SNX22-205ENST00000560945 ZNF536O15090 1300 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms