RNA–Protein interactions for RNA: ENST00000560912.5

CRNDE-210, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 5 BASIC

Gene CRNDE, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-210ENST00000560912 ARMCX2Q7L311 632 aa22.72■■□□□ 1.23
CRNDE-210ENST00000560912 GMCL1P1Q8NEA9 526 aa22.72■■□□□ 1.23
CRNDE-210ENST00000560912 CHST13Q8NET6 341 aa22.72■■□□□ 1.23
CRNDE-210ENST00000560912 KIFC2Q96AC6 838 aa22.72■■□□□ 1.23
CRNDE-210ENST00000560912 MTMR4Q9NYA4 1195 aa22.72■■□□□ 1.23
CRNDE-210ENST00000560912 FEM1BQ9UK73 627 aa22.72■■□□□ 1.23
CRNDE-210ENST00000560912 CHD9Q3L8U1 2897 aa22.71■■□□□ 1.23
CRNDE-210ENST00000560912 CTAGE5O15320 804 aa22.71■■□□□ 1.23
CRNDE-210ENST00000560912 GPAA1O43292 621 aa22.71■■□□□ 1.23
CRNDE-210ENST00000560912 NKX3-2P78367 333 aa22.71■■□□□ 1.23
CRNDE-210ENST00000560912 PPIGQ13427 754 aaKnown RBP eCLIP22.71■■□□□ 1.23
CRNDE-210ENST00000560912 C16orf59Q7L2K0 433 aa22.71■■□□□ 1.23
CRNDE-210ENST00000560912 FAM126BQ8IXS8 530 aa22.71■■□□□ 1.23
CRNDE-210ENST00000560912 ANKRD35Q8N283 1001 aa22.71■■□□□ 1.23
CRNDE-210ENST00000560912 USP38Q8NB14 1042 aa22.71■■□□□ 1.23
CRNDE-210ENST00000560912 ZNF576Q9H609 170 aa22.71■■□□□ 1.23
CRNDE-210ENST00000560912 A0A0U1RQG5 324 aaPredicted RBP22.7■■□□□ 1.22
CRNDE-210ENST00000560912 ARVCFO00192 962 aa22.7■■□□□ 1.22
CRNDE-210ENST00000560912 SLC4A3P48751 1232 aa22.7■■□□□ 1.22
CRNDE-210ENST00000560912 TMEM240Q5SV17 173 aa22.7■■□□□ 1.22
CRNDE-210ENST00000560912 LRRC47Q8N1G4 583 aaKnown RBP22.7■■□□□ 1.22
CRNDE-210ENST00000560912 TIFAQ96CG3 184 aa22.7■■□□□ 1.22
CRNDE-210ENST00000560912 SPC25Q9HBM1 224 aa22.7■■□□□ 1.22
CRNDE-210ENST00000560912 CTDP1Q9Y5B0 961 aaPredicted RBP22.7■■□□□ 1.22
CRNDE-210ENST00000560912 RNF113AO15541 343 aaKnown RBP22.69■■□□□ 1.22
CRNDE-210ENST00000560912 PRDM1O75626 825 aa22.69■■□□□ 1.22
CRNDE-210ENST00000560912 TTLL1O95922 423 aa22.69■■□□□ 1.22
CRNDE-210ENST00000560912 GNAT2P19087 354 aa22.69■■□□□ 1.22
CRNDE-210ENST00000560912 TDO2P48775 406 aa22.69■■□□□ 1.22
CRNDE-210ENST00000560912 ZNF287Q9HBT7 754 aa22.69■■□□□ 1.22
CRNDE-210ENST00000560912 M0R2C6 588 aa22.68■■□□□ 1.22
CRNDE-210ENST00000560912 ZFYP08048 801 aaPredicted RBP22.68■■□□□ 1.22
CRNDE-210ENST00000560912 CSF2RAP15509 400 aa22.68■■□□□ 1.22
CRNDE-210ENST00000560912 CCDC174Q6PII3 467 aa22.68■■□□□ 1.22
CRNDE-210ENST00000560912 CCDC144CPQ8IYA2 1237 aa22.68■■□□□ 1.22
CRNDE-210ENST00000560912 ZNF444Q8N0Y2 327 aaPredicted RBP22.68■■□□□ 1.22
CRNDE-210ENST00000560912 FAM133AQ8N9E0 248 aa22.68■■□□□ 1.22
CRNDE-210ENST00000560912 SYMPKQ92797 1274 aaKnown RBP22.68■■□□□ 1.22
CRNDE-210ENST00000560912 PBX4Q9BYU1 374 aa22.68■■□□□ 1.22
CRNDE-210ENST00000560912 NCOR1O75376 2440 aa22.67■■□□□ 1.22
CRNDE-210ENST00000560912 ASTN1O14525 1302 aa22.67■■□□□ 1.22
CRNDE-210ENST00000560912 FDX1P10109 184 aa22.67■■□□□ 1.22
CRNDE-210ENST00000560912 BMP3P12645 472 aa22.67■■□□□ 1.22
CRNDE-210ENST00000560912 GNASQ5JWF2 1037 aa22.67■■□□□ 1.22
CRNDE-210ENST00000560912 TSHZ3Q63HK5 1081 aa22.67■■□□□ 1.22
CRNDE-210ENST00000560912 NEDD1Q8NHV4 660 aa22.67■■□□□ 1.22
CRNDE-210ENST00000560912 PRDM6Q9NQX0 595 aa22.67■■□□□ 1.22
CRNDE-210ENST00000560912 ZNF536O15090 1300 aa22.66■■□□□ 1.22
CRNDE-210ENST00000560912 CD4P01730 458 aa22.66■■□□□ 1.22
CRNDE-210ENST00000560912 PBX2P40425 430 aa22.66■■□□□ 1.22
CRNDE-210ENST00000560912 CNTN2Q02246 1040 aa22.66■■□□□ 1.22
CRNDE-210ENST00000560912 C20orf194Q5TEA3 1177 aa22.66■■□□□ 1.22
CRNDE-210ENST00000560912 SLFN13Q68D06 897 aa22.66■■□□□ 1.22
CRNDE-210ENST00000560912 PSRC1Q6PGN9 363 aaPredicted RBP22.66■■□□□ 1.22
CRNDE-210ENST00000560912 TMEM199Q8N511 208 aa22.66■■□□□ 1.22
CRNDE-210ENST00000560912 PPP1R12CQ9BZL4 782 aa22.66■■□□□ 1.22
CRNDE-210ENST00000560912 ACAD9Q9H845 621 aa22.66■■□□□ 1.22
CRNDE-210ENST00000560912 HOMER2Q9NSB8 354 aa22.66■■□□□ 1.22
CRNDE-210ENST00000560912 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.65■■□□□ 1.22
CRNDE-210ENST00000560912 GRXCR1A8MXD5 290 aa22.65■■□□□ 1.22
CRNDE-210ENST00000560912 TLR3O15455 904 aaKnown RBP22.65■■□□□ 1.22
CRNDE-210ENST00000560912 TJAP1Q5JTD0 557 aa22.65■■□□□ 1.22
CRNDE-210ENST00000560912 IFNL3Q8IZI9 196 aa22.65■■□□□ 1.22
CRNDE-210ENST00000560912 SLC43A3Q8NBI5 491 aa22.65■■□□□ 1.22
CRNDE-210ENST00000560912 VTI1AQ96AJ9 217 aa22.65■■□□□ 1.22
CRNDE-210ENST00000560912 GPATCH3Q96I76 525 aa22.65■■□□□ 1.22
CRNDE-210ENST00000560912 A1CFQ9NQ94 594 aaKnown RBP22.65■■□□□ 1.22
CRNDE-210ENST00000560912 RCAN3Q9UKA8 241 aa22.65■■□□□ 1.22
CRNDE-210ENST00000560912 GNEQ9Y223 722 aaKnown RBP22.65■■□□□ 1.22
CRNDE-210ENST00000560912 CHD7Q9P2D1 2997 aa22.65■■□□□ 1.22
CRNDE-210ENST00000560912 SOWAHBA6NEL2 793 aa22.64■■□□□ 1.21
CRNDE-210ENST00000560912 STAT2P52630 851 aa22.64■■□□□ 1.21
CRNDE-210ENST00000560912 BEX3Q00994 111 aa22.64■■□□□ 1.21
CRNDE-210ENST00000560912 ZNF365Q70YC5 407 aa22.64■■□□□ 1.21
CRNDE-210ENST00000560912 GMCL1Q96IK5 515 aa22.64■■□□□ 1.21
CRNDE-210ENST00000560912 DCTPP1Q9H773 170 aa22.64■■□□□ 1.21
CRNDE-210ENST00000560912 RNF146Q9NTX7 359 aa22.64■■□□□ 1.21
CRNDE-210ENST00000560912 PATL2C9JE40 543 aaKnown RBP22.63■■□□□ 1.21
CRNDE-210ENST00000560912 TMEM232C9JQI7 657 aa22.63■■□□□ 1.21
CRNDE-210ENST00000560912 APPP05067 770 aa22.63■■□□□ 1.21
CRNDE-210ENST00000560912 TSPY3P0CV98 308 aa22.63■■□□□ 1.21
CRNDE-210ENST00000560912 TSPY8P0CW00 308 aa22.63■■□□□ 1.21
CRNDE-210ENST00000560912 ACRP10323 421 aa22.63■■□□□ 1.21
CRNDE-210ENST00000560912 TNFAIP2Q03169 654 aa22.63■■□□□ 1.21
CRNDE-210ENST00000560912 FAM160B2Q86V87 743 aa22.63■■□□□ 1.21
CRNDE-210ENST00000560912 IL23AQ9NPF7 189 aa22.63■■□□□ 1.21
CRNDE-210ENST00000560912 CYP2C18P33260 490 aa22.62■■□□□ 1.21
CRNDE-210ENST00000560912 PDE4BQ07343 736 aa22.62■■□□□ 1.21
CRNDE-210ENST00000560912 TKFCQ3LXA3 575 aa22.62■■□□□ 1.21
CRNDE-210ENST00000560912 CXCL17Q6UXB2 119 aa22.62■■□□□ 1.21
CRNDE-210ENST00000560912 CCDC129Q6ZRS4 1044 aa22.62■■□□□ 1.21
CRNDE-210ENST00000560912 TLK2Q86UE8 772 aa22.62■■□□□ 1.21
CRNDE-210ENST00000560912 HERVK_113Q902F9 699 aa22.62■■□□□ 1.21
CRNDE-210ENST00000560912 AGBL1Q96MI9 1066 aa22.62■■□□□ 1.21
CRNDE-210ENST00000560912 GAS2L1Q99501 681 aaPredicted RBP22.62■■□□□ 1.21
CRNDE-210ENST00000560912 ASB14A6NK59 587 aa22.61■■□□□ 1.21
CRNDE-210ENST00000560912 PLA2G6O60733 806 aa22.61■■□□□ 1.21
CRNDE-210ENST00000560912 CABYRO75952 493 aa22.61■■□□□ 1.21
CRNDE-210ENST00000560912 AKNAD1Q5T1N1 836 aa22.61■■□□□ 1.21
CRNDE-210ENST00000560912 CHURC1Q8WUH1 139 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms