RNA–Protein interactions for RNA: ENST00000560667.5

IDH3A-220, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 5

Gene IDH3A, Length 2,110 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-220ENST00000560667 HMGCS2P54868 508 aa8.55□□□□□ -1.04
IDH3A-220ENST00000560667 IL17AQ16552 155 aa8.55□□□□□ -1.04
IDH3A-220ENST00000560667 CAMK4Q16566 473 aa8.55□□□□□ -1.04
IDH3A-220ENST00000560667 KLHL40Q2TBA0 621 aa8.55□□□□□ -1.04
IDH3A-220ENST00000560667 GPATCH4Q5T3I0 446 aaKnown RBP8.55□□□□□ -1.04
IDH3A-220ENST00000560667 USP50Q70EL3 339 aaPredicted RBP8.55□□□□□ -1.04
IDH3A-220ENST00000560667 SCYL3Q8IZE3 742 aa8.55□□□□□ -1.04
IDH3A-220ENST00000560667 BLIDQ8IZY5 108 aa8.55□□□□□ -1.04
IDH3A-220ENST00000560667 DCAF4Q8WV16 495 aa8.55□□□□□ -1.04
IDH3A-220ENST00000560667 GJA10Q969M2 543 aa8.55□□□□□ -1.04
IDH3A-220ENST00000560667 PANK2Q9BZ23 570 aa8.55□□□□□ -1.04
IDH3A-220ENST00000560667 ZNF408Q9H9D4 720 aa8.55□□□□□ -1.04
IDH3A-220ENST00000560667 ARHGEF10LQ9HCE6 1279 aa8.55□□□□□ -1.04
IDH3A-220ENST00000560667 PCDHA4Q9UN74 947 aa8.55□□□□□ -1.04
IDH3A-220ENST00000560667 SNCAIPQ9Y6H5 919 aa8.55□□□□□ -1.04
IDH3A-220ENST00000560667 GOLGA6L22H0YM25 854 aa8.54□□□□□ -1.04
IDH3A-220ENST00000560667 ME1P48163 572 aa8.54□□□□□ -1.04
IDH3A-220ENST00000560667 CDC37Q16543 378 aaPredicted RBP8.54□□□□□ -1.04
IDH3A-220ENST00000560667 INF2Q27J81 1249 aa8.54□□□□□ -1.04
IDH3A-220ENST00000560667 AXDND1Q5T1B0 1012 aaPredicted RBP8.54□□□□□ -1.04
IDH3A-220ENST00000560667 AGBL1Q96MI9 1066 aa8.54□□□□□ -1.04
IDH3A-220ENST00000560667 LZTS2Q9BRK4 669 aa8.54□□□□□ -1.04
IDH3A-220ENST00000560667 ZMYND12Q9H0C1 365 aa8.54□□□□□ -1.04
IDH3A-220ENST00000560667 R3HDMLQ9H3Y0 253 aa8.54□□□□□ -1.04
IDH3A-220ENST00000560667 ELP3Q9H9T3 547 aa8.54□□□□□ -1.04
IDH3A-220ENST00000560667 CFAP45Q9UL16 551 aa8.54□□□□□ -1.04
IDH3A-220ENST00000560667 PCDHA1Q9Y5I3 950 aa8.54□□□□□ -1.04
IDH3A-220ENST00000560667 SMARCA1P28370 1054 aa8.54□□□□□ -1.04
IDH3A-220ENST00000560667 CDC25AP30304 524 aa8.54□□□□□ -1.04
IDH3A-220ENST00000560667 HOXA13P31271 388 aaPredicted RBP8.54□□□□□ -1.04
IDH3A-220ENST00000560667 UBE2HP62256 183 aa8.54□□□□□ -1.04
IDH3A-220ENST00000560667 SLC39A14Q15043 492 aa8.54□□□□□ -1.04
IDH3A-220ENST00000560667 SAFBQ15424 915 aaKnown RBP eCLIP8.54□□□□□ -1.04
IDH3A-220ENST00000560667 SUPT20HL1Q3ZLR7 823 aa8.54□□□□□ -1.04
IDH3A-220ENST00000560667 SYDE2Q5VT97 1194 aa8.54□□□□□ -1.04
IDH3A-220ENST00000560667 BRAPQ7Z569 592 aa8.54□□□□□ -1.04
IDH3A-220ENST00000560667 FEZ1Q99689 392 aa8.54□□□□□ -1.04
IDH3A-220ENST00000560667 SCAND2PQ9GZW5 306 aaPredicted RBP8.54□□□□□ -1.04
IDH3A-220ENST00000560667 SEC63Q9UGP8 760 aaKnown RBP8.54□□□□□ -1.04
IDH3A-220ENST00000560667 AFG3L2Q9Y4W6 797 aa8.54□□□□□ -1.04
IDH3A-220ENST00000560667 IRF6O14896 467 aa8.53□□□□□ -1.04
IDH3A-220ENST00000560667 SPTLC2O15270 562 aa8.53□□□□□ -1.04
IDH3A-220ENST00000560667 PDIA4P13667 645 aaKnown RBP8.53□□□□□ -1.04
IDH3A-220ENST00000560667 VCAM1P19320 739 aa8.53□□□□□ -1.04
IDH3A-220ENST00000560667 MCM7P33993 719 aa8.53□□□□□ -1.04
IDH3A-220ENST00000560667 NASPP49321 788 aaPredicted RBP8.53□□□□□ -1.04
IDH3A-220ENST00000560667 BACE1P56817 501 aa8.53□□□□□ -1.04
IDH3A-220ENST00000560667 MAP3K9P80192 1104 aa8.53□□□□□ -1.04
IDH3A-220ENST00000560667 SNW1Q13573 536 aaKnown RBP8.53□□□□□ -1.04
IDH3A-220ENST00000560667 STK38Q15208 465 aa8.53□□□□□ -1.04
IDH3A-220ENST00000560667 TREML2Q5T2D2 321 aa8.53□□□□□ -1.04
IDH3A-220ENST00000560667 DCAF15Q66K64 600 aa8.53□□□□□ -1.04
IDH3A-220ENST00000560667 SHC4Q6S5L8 630 aa8.53□□□□□ -1.04
IDH3A-220ENST00000560667 BTNL9Q6UXG8 535 aa8.53□□□□□ -1.04
IDH3A-220ENST00000560667 SLC30A10Q6XR72 485 aa8.53□□□□□ -1.04
IDH3A-220ENST00000560667 CCAR1Q8IX12 1150 aaKnown RBP8.53□□□□□ -1.04
IDH3A-220ENST00000560667 CPXCR1Q8N123 301 aa8.53□□□□□ -1.04
IDH3A-220ENST00000560667 ZNF280CQ8ND82 737 aa8.53□□□□□ -1.04
IDH3A-220ENST00000560667 ZNF396Q96N95 335 aaPredicted RBP8.53□□□□□ -1.04
IDH3A-220ENST00000560667 PURBQ96QR8 312 aaKnown RBP8.53□□□□□ -1.04
IDH3A-220ENST00000560667 TMEM60Q9H2L4 133 aa8.53□□□□□ -1.04
IDH3A-220ENST00000560667 POLR3EQ9NVU0 708 aa8.53□□□□□ -1.04
IDH3A-220ENST00000560667 ZNF536O15090 1300 aa8.53□□□□□ -1.04
IDH3A-220ENST00000560667 PITPNM2Q9BZ72 1349 aa8.53□□□□□ -1.04
IDH3A-220ENST00000560667 SYCE3A1L190 88 aa8.53□□□□□ -1.04
IDH3A-220ENST00000560667 MEIS2O14770 477 aa8.53□□□□□ -1.04
IDH3A-220ENST00000560667 XBP1P17861 261 aa8.53□□□□□ -1.04
IDH3A-220ENST00000560667 NDUFA8P51970 172 aa8.53□□□□□ -1.04
IDH3A-220ENST00000560667 STAT2P52630 851 aa8.53□□□□□ -1.04
IDH3A-220ENST00000560667 MKRN3Q13064 507 aaKnown RBP8.53□□□□□ -1.04
IDH3A-220ENST00000560667 TTLL12Q14166 644 aaPredicted RBP8.53□□□□□ -1.04
IDH3A-220ENST00000560667 ZSCAN23Q3MJ62 389 aa8.53□□□□□ -1.04
IDH3A-220ENST00000560667 C4orf32Q8N8J7 132 aa8.53□□□□□ -1.04
IDH3A-220ENST00000560667 JMYQ8N9B5 988 aa8.53□□□□□ -1.04
IDH3A-220ENST00000560667 KIAA1683Q9H0B3 1180 aa8.53□□□□□ -1.04
IDH3A-220ENST00000560667 RPAP3Q9H6T3 665 aaPredicted RBP8.53□□□□□ -1.04
IDH3A-220ENST00000560667 GOPCQ9HD26 462 aa8.53□□□□□ -1.04
IDH3A-220ENST00000560667 SH3GLB2Q9NR46 395 aa8.53□□□□□ -1.04
IDH3A-220ENST00000560667 DACT1Q9NYF0 836 aa8.53□□□□□ -1.04
IDH3A-220ENST00000560667 RIPK3Q9Y572 518 aa8.53□□□□□ -1.04
IDH3A-220ENST00000560667 ATAD5Q96QE3 1844 aa8.52□□□□□ -1.05
IDH3A-220ENST00000560667 GJA5P36382 358 aa8.52□□□□□ -1.05
IDH3A-220ENST00000560667 PTGDRQ13258 359 aa8.52□□□□□ -1.05
IDH3A-220ENST00000560667 ENGASEQ8NFI3 743 aa8.52□□□□□ -1.05
IDH3A-220ENST00000560667 TBCKQ8TEA7 893 aa8.52□□□□□ -1.05
IDH3A-220ENST00000560667 OTUD5Q96G74 571 aa8.52□□□□□ -1.05
IDH3A-220ENST00000560667 TANGO6Q9C0B7 1094 aa8.52□□□□□ -1.05
IDH3A-220ENST00000560667 PSTPIP2Q9H939 334 aa8.52□□□□□ -1.05
IDH3A-220ENST00000560667 RAVER2Q9HCJ3 691 aaKnown RBP8.52□□□□□ -1.05
IDH3A-220ENST00000560667 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.52□□□□□ -1.05
IDH3A-220ENST00000560667 PICK1Q9NRD5 415 aa8.52□□□□□ -1.05
IDH3A-220ENST00000560667 ELP1O95163 1332 aa8.52□□□□□ -1.05
IDH3A-220ENST00000560667 UBXN2AP68543 259 aa8.51□□□□□ -1.05
IDH3A-220ENST00000560667 GSE1Q14687 1217 aa8.51□□□□□ -1.05
IDH3A-220ENST00000560667 COL13A1Q5TAT6 717 aaPredicted RBP8.51□□□□□ -1.05
IDH3A-220ENST00000560667 CST9Q5W186 159 aa8.51□□□□□ -1.05
IDH3A-220ENST00000560667 CYP2W1Q8TAV3 490 aa8.51□□□□□ -1.05
IDH3A-220ENST00000560667 ZC3H15Q8WU90 426 aaKnown RBP8.51□□□□□ -1.05
IDH3A-220ENST00000560667 ATG4CQ96DT6 458 aa8.51□□□□□ -1.05
IDH3A-220ENST00000560667 EPSTI1Q96J88 318 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms