RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 TEX14Q8IWB6 1497 aa6.03□□□□□ -1.44
TMOD3-207ENST00000560549 ANKRD30BQ9BXX2 1392 aa6.03□□□□□ -1.44
TMOD3-207ENST00000560549 FAM86C2PA6NEL3 165 aa6.02□□□□□ -1.44
TMOD3-207ENST00000560549 ZNF165P49910 485 aa6.02□□□□□ -1.44
TMOD3-207ENST00000560549 EGR3Q06889 387 aa6.02□□□□□ -1.44
TMOD3-207ENST00000560549 CD109Q6YHK3 1445 aa6.02□□□□□ -1.44
TMOD3-207ENST00000560549 CILP2Q8IUL8 1156 aa6.02□□□□□ -1.44
TMOD3-207ENST00000560549 SREK1Q8WXA9 508 aaKnown RBP6.02□□□□□ -1.44
TMOD3-207ENST00000560549 KIRREL1Q96J84 757 aa6.02□□□□□ -1.44
TMOD3-207ENST00000560549 HDAC8Q9BY41 377 aa6.02□□□□□ -1.44
TMOD3-207ENST00000560549 GPATCH2Q9NW75 528 aa6.02□□□□□ -1.44
TMOD3-207ENST00000560549 TMEM59LQ9UK28 342 aa6.02□□□□□ -1.44
TMOD3-207ENST00000560549 KCNH3Q9ULD8 1083 aa6.02□□□□□ -1.44
TMOD3-207ENST00000560549 ABCA9Q8IUA7 1624 aa6.02□□□□□ -1.45
TMOD3-207ENST00000560549 PZPP20742 1482 aa6.02□□□□□ -1.45
TMOD3-207ENST00000560549 MBD5Q9P267 1494 aa6.02□□□□□ -1.45
TMOD3-207ENST00000560549 TONSLQ96HA7 1378 aa6.02□□□□□ -1.45
TMOD3-207ENST00000560549 CANXP27824 592 aaKnown RBP6.02□□□□□ -1.45
TMOD3-207ENST00000560549 NBPF9Q3BBW0 867 aa6.02□□□□□ -1.45
TMOD3-207ENST00000560549 RUFY4Q6ZNE9 571 aa6.02□□□□□ -1.45
TMOD3-207ENST00000560549 SLC43A3Q8NBI5 491 aa6.02□□□□□ -1.45
TMOD3-207ENST00000560549 LIN37Q96GY3 246 aaPredicted RBP6.02□□□□□ -1.45
TMOD3-207ENST00000560549 FAM84AQ96KN4 292 aa6.02□□□□□ -1.45
TMOD3-207ENST00000560549 SLC6A18Q96N87 628 aa6.02□□□□□ -1.45
TMOD3-207ENST00000560549 GMLQ99445 158 aa6.02□□□□□ -1.45
TMOD3-207ENST00000560549 TRIT1Q9H3H1 467 aaKnown RBP6.02□□□□□ -1.45
TMOD3-207ENST00000560549 ADGRL2O95490 1459 aa6.01□□□□□ -1.45
TMOD3-207ENST00000560549 LRRC10BA6NIK2 292 aa6.01□□□□□ -1.45
TMOD3-207ENST00000560549 C9IYK1 514 aa6.01□□□□□ -1.45
TMOD3-207ENST00000560549 EFEMP2O95967 443 aa6.01□□□□□ -1.45
TMOD3-207ENST00000560549 ZGLP1P0C6A0 271 aa6.01□□□□□ -1.45
TMOD3-207ENST00000560549 TRHRP34981 398 aaPredicted RBP6.01□□□□□ -1.45
TMOD3-207ENST00000560549 HK2P52789 917 aa6.01□□□□□ -1.45
TMOD3-207ENST00000560549 TEKQ02763 1124 aa6.01□□□□□ -1.45
TMOD3-207ENST00000560549 NMIQ13287 307 aaPredicted RBP6.01□□□□□ -1.45
TMOD3-207ENST00000560549 MLECQ14165 292 aa6.01□□□□□ -1.45
TMOD3-207ENST00000560549 ZYXQ15942 572 aaKnown RBP6.01□□□□□ -1.45
TMOD3-207ENST00000560549 TIGD5Q53EQ6 642 aa6.01□□□□□ -1.45
TMOD3-207ENST00000560549 CCDC81Q6ZN84 652 aa6.01□□□□□ -1.45
TMOD3-207ENST00000560549 TTC6Q86TZ1 520 aa6.01□□□□□ -1.45
TMOD3-207ENST00000560549 YTHDC1Q96MU7 727 aaKnown RBP6.01□□□□□ -1.45
TMOD3-207ENST00000560549 INPP5FQ9Y2H2 1132 aa6.01□□□□□ -1.45
TMOD3-207ENST00000560549 DBX1A6NMT0 343 aa6□□□□□ -1.45
TMOD3-207ENST00000560549 SHOXO15266 292 aa6□□□□□ -1.45
TMOD3-207ENST00000560549 HPXP02790 462 aa6□□□□□ -1.45
TMOD3-207ENST00000560549 LTKP29376 864 aa6□□□□□ -1.45
TMOD3-207ENST00000560549 DDX10Q13206 875 aaKnown RBP6□□□□□ -1.45
TMOD3-207ENST00000560549 NBPF8Q3BBV2 869 aa6□□□□□ -1.45
TMOD3-207ENST00000560549 PPFIBP1Q86W92 1011 aa6□□□□□ -1.45
TMOD3-207ENST00000560549 RASGRP4Q8TDF6 673 aa6□□□□□ -1.45
TMOD3-207ENST00000560549 PRDM14Q9GZV8 571 aa6□□□□□ -1.45
TMOD3-207ENST00000560549 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6□□□□□ -1.45
TMOD3-207ENST00000560549 GINM1Q9NU53 330 aa6□□□□□ -1.45
TMOD3-207ENST00000560549 ZNF281Q9Y2X9 895 aa6□□□□□ -1.45
TMOD3-207ENST00000560549 ANKRD30AQ9BXX3 1397 aa6□□□□□ -1.45
TMOD3-207ENST00000560549 C9orf84Q5VXU9 1444 aa5.99□□□□□ -1.45
TMOD3-207ENST00000560549 CDC42BPAQ5VT25 1732 aa5.99□□□□□ -1.45
TMOD3-207ENST00000560549 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.99□□□□□ -1.45
TMOD3-207ENST00000560549 CLEC3AO75596 197 aa5.99□□□□□ -1.45
TMOD3-207ENST00000560549 PRAMEF1O95521 474 aa5.99□□□□□ -1.45
TMOD3-207ENST00000560549 FGRP09769 529 aa5.99□□□□□ -1.45
TMOD3-207ENST00000560549 ZNF124Q15973 351 aa5.99□□□□□ -1.45
TMOD3-207ENST00000560549 TMEM67Q5HYA8 995 aa5.99□□□□□ -1.45
TMOD3-207ENST00000560549 LSRQ86X29 649 aaPredicted RBP5.99□□□□□ -1.45
TMOD3-207ENST00000560549 MCF2L2Q86YR7 1114 aa5.99□□□□□ -1.45
TMOD3-207ENST00000560549 USHBP1Q8N6Y0 703 aa5.99□□□□□ -1.45
TMOD3-207ENST00000560549 GPRASP2Q96D09 838 aa5.99□□□□□ -1.45
TMOD3-207ENST00000560549 G6PC3Q9BUM1 346 aa5.99□□□□□ -1.45
TMOD3-207ENST00000560549 SAMD9LQ8IVG5 1584 aa5.99□□□□□ -1.45
TMOD3-207ENST00000560549 ANKRD50Q9ULJ7 1429 aa5.99□□□□□ -1.45
TMOD3-207ENST00000560549 ARHGEF12Q9NZN5 1544 aa5.98□□□□□ -1.45
TMOD3-207ENST00000560549 TTC37Q6PGP7 1564 aa5.98□□□□□ -1.45
TMOD3-207ENST00000560549 HSPA5P11021 654 aaKnown RBP5.98□□□□□ -1.45
TMOD3-207ENST00000560549 CCNFP41002 786 aa5.98□□□□□ -1.45
TMOD3-207ENST00000560549 MLANAQ16655 118 aa5.98□□□□□ -1.45
TMOD3-207ENST00000560549 BBS9Q3SYG4 887 aa5.98□□□□□ -1.45
TMOD3-207ENST00000560549 TDRD10Q5VZ19 366 aaKnown RBP5.98□□□□□ -1.45
TMOD3-207ENST00000560549 ZPBP2Q6X784 338 aa5.98□□□□□ -1.45
TMOD3-207ENST00000560549 SYTL5Q8TDW5 730 aaPredicted RBP5.98□□□□□ -1.45
TMOD3-207ENST00000560549 TCTN2Q96GX1 697 aa5.98□□□□□ -1.45
TMOD3-207ENST00000560549 DRC1Q96MC2 740 aa5.98□□□□□ -1.45
TMOD3-207ENST00000560549 C19orf44Q9H6X5 657 aa5.98□□□□□ -1.45
TMOD3-207ENST00000560549 KCNK12Q9HB15 430 aa5.98□□□□□ -1.45
TMOD3-207ENST00000560549 ITSN2Q9NZM3 1697 aa5.98□□□□□ -1.45
TMOD3-207ENST00000560549 SHANK2Q9UPX8 1470 aa5.98□□□□□ -1.45
TMOD3-207ENST00000560549 SRCAPQ6ZRS2 3230 aa5.98□□□□□ -1.45
TMOD3-207ENST00000560549 CFAP74Q9C0B2 1584 aa5.98□□□□□ -1.45
TMOD3-207ENST00000560549 MYO5CQ9NQX4 1742 aa5.97□□□□□ -1.45
TMOD3-207ENST00000560549 TMEM82A0PJX8 343 aa5.97□□□□□ -1.45
TMOD3-207ENST00000560549 KRT1P04264 644 aa5.97□□□□□ -1.45
TMOD3-207ENST00000560549 TSPY4P0CV99 314 aa5.97□□□□□ -1.45
TMOD3-207ENST00000560549 TSPY10P0CW01 314 aa5.97□□□□□ -1.45
TMOD3-207ENST00000560549 ATF4P18848 351 aaPredicted RBP5.97□□□□□ -1.45
TMOD3-207ENST00000560549 CTSKP43235 329 aa5.97□□□□□ -1.45
TMOD3-207ENST00000560549 RNF4P78317 190 aa5.97□□□□□ -1.45
TMOD3-207ENST00000560549 LRRFIP1Q32MZ4 808 aaKnown RBP5.97□□□□□ -1.45
TMOD3-207ENST00000560549 PRR23BQ6ZRT6 265 aa5.97□□□□□ -1.45
TMOD3-207ENST00000560549 KSR1Q8IVT5 923 aa5.97□□□□□ -1.45
TMOD3-207ENST00000560549 FERD3LQ96RJ6 166 aa5.97□□□□□ -1.45
TMOD3-207ENST00000560549 FOXP3Q9BZS1 431 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms