RNA–Protein interactions for RNA: ENST00000560328.1

NEO1-208, Transcript of neogenin 1, human

TSL 1 (best)

Gene NEO1, Length 5,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEO1-208	ENST00000560328	ARHGAP44	Q17R89	818 aa		10.35	□□□□□ -0.75
NEO1-208	ENST00000560328	SPATA1	Q5VX52	437 aa		10.35	□□□□□ -0.75
NEO1-208	ENST00000560328	IWS1	Q96ST2	819 aa		10.35	□□□□□ -0.75
NEO1-208	ENST00000560328	LSM14B	Q9BX40	385 aa	Known RBP	10.35	□□□□□ -0.75
NEO1-208	ENST00000560328	LRRIQ1	Q96JM4	1722 aa		10.34	□□□□□ -0.75
NEO1-208	ENST00000560328	SMIM23	A6NLE4	172 aa		10.34	□□□□□ -0.75
NEO1-208	ENST00000560328	PRPF3	O43395	683 aa	Known RBP	10.34	□□□□□ -0.75
NEO1-208	ENST00000560328	XKR9	Q5GH70	373 aa		10.34	□□□□□ -0.75
NEO1-208	ENST00000560328	UTP14C	Q5TAP6	766 aa	Known RBP	10.34	□□□□□ -0.75
NEO1-208	ENST00000560328	IQCD	Q96DY2	449 aa		10.34	□□□□□ -0.75
NEO1-208	ENST00000560328	CCDC51	Q96ER9	411 aa		10.34	□□□□□ -0.75
NEO1-208	ENST00000560328	RCOR1	Q9UKL0	485 aa		10.34	□□□□□ -0.75
NEO1-208	ENST00000560328	TLDC2	A0PJX2	215 aa		10.34	□□□□□ -0.75
NEO1-208	ENST00000560328	LRMP	Q12912	555 aa		10.34	□□□□□ -0.75
NEO1-208	ENST00000560328	OR8K1	Q8NGG5	319 aa		10.34	□□□□□ -0.75
NEO1-208	ENST00000560328	DEPTOR	Q8TB45	409 aa		10.34	□□□□□ -0.75
NEO1-208	ENST00000560328	MASTL	Q96GX5	879 aa		10.34	□□□□□ -0.75
NEO1-208	ENST00000560328	PI4KB	Q9UBF8	816 aa		10.34	□□□□□ -0.75
NEO1-208	ENST00000560328	KIAA1024	Q9UPX6	916 aa		10.34	□□□□□ -0.75
NEO1-208	ENST00000560328	OVOS2	A0A0G2JMS6	1433 aa		10.34	□□□□□ -0.75
NEO1-208	ENST00000560328	OVOS2	A0A0J9YW53	1432 aa		10.34	□□□□□ -0.75
NEO1-208	ENST00000560328	OVOS2	Q6IE36	1432 aa		10.34	□□□□□ -0.75
NEO1-208	ENST00000560328	TNNI1	P19237	187 aa		10.34	□□□□□ -0.75
NEO1-208	ENST00000560328	CDK8	P49336	464 aa		10.34	□□□□□ -0.75
NEO1-208	ENST00000560328	FOXO4	P98177	505 aa		10.34	□□□□□ -0.75
NEO1-208	ENST00000560328	CCDC93	Q567U6	631 aa		10.34	□□□□□ -0.75
NEO1-208	ENST00000560328	KRT26	Q7Z3Y9	468 aa		10.34	□□□□□ -0.75
NEO1-208	ENST00000560328	CELF1	Q92879	486 aa	Known RBP	10.34	□□□□□ -0.75
NEO1-208	ENST00000560328	AIFM3	Q96NN9	605 aa		10.34	□□□□□ -0.75
NEO1-208	ENST00000560328	TRERF1	Q96PN7	1200 aa		10.34	□□□□□ -0.75
NEO1-208	ENST00000560328	BRIP1	Q9BX63	1249 aa		10.34	□□□□□ -0.75
NEO1-208	ENST00000560328	PNMA2	Q9UL42	364 aa		10.34	□□□□□ -0.75
NEO1-208	ENST00000560328	SLC8A3	P57103	927 aa		10.34	□□□□□ -0.75
NEO1-208	ENST00000560328	HDX	Q7Z353	690 aa		10.34	□□□□□ -0.75
NEO1-208	ENST00000560328	TBCK	Q8TEA7	893 aa		10.34	□□□□□ -0.75
NEO1-208	ENST00000560328	ARHGEF1	Q92888	912 aa	Known RBP	10.34	□□□□□ -0.75
NEO1-208	ENST00000560328	PGBD1	Q96JS3	809 aa		10.34	□□□□□ -0.75
NEO1-208	ENST00000560328	AGTPBP1	Q9UPW5	1226 aa		10.34	□□□□□ -0.75
NEO1-208	ENST00000560328	RPAP1	Q9BWH6	1393 aa	Predicted RBP	10.34	□□□□□ -0.75
NEO1-208	ENST00000560328	NEXMIF	Q5QGS0	1516 aa		10.34	□□□□□ -0.75
NEO1-208	ENST00000560328	DLC1	Q96QB1	1528 aa		10.34	□□□□□ -0.75
NEO1-208	ENST00000560328	KRT19	P08727	400 aa		10.33	□□□□□ -0.76
NEO1-208	ENST00000560328	C8orf74	Q6P047	294 aa		10.33	□□□□□ -0.76
NEO1-208	ENST00000560328	UBL4B	Q8N7F7	174 aa		10.33	□□□□□ -0.76
NEO1-208	ENST00000560328	COA7	Q96BR5	231 aa		10.33	□□□□□ -0.76
NEO1-208	ENST00000560328	IFIH1	Q9BYX4	1025 aa	Known RBP	10.33	□□□□□ -0.76
NEO1-208	ENST00000560328	COL4A3BP	Q9Y5P4	624 aa		10.33	□□□□□ -0.76
NEO1-208	ENST00000560328	FAM26F	Q5R3K3	315 aa		10.33	□□□□□ -0.76
NEO1-208	ENST00000560328	CFAP58	Q5T655	872 aa		10.33	□□□□□ -0.76
NEO1-208	ENST00000560328	FAM178B	Q8IXR5	827 aa		10.33	□□□□□ -0.76
NEO1-208	ENST00000560328	ATRIP	Q8WXE1	791 aa		10.33	□□□□□ -0.76
NEO1-208	ENST00000560328	GSDMA	Q96QA5	445 aa		10.33	□□□□□ -0.76
NEO1-208	ENST00000560328	PSMB7	Q99436	277 aa		10.33	□□□□□ -0.76
NEO1-208	ENST00000560328	VPS18	Q9P253	973 aa		10.33	□□□□□ -0.76
NEO1-208	ENST00000560328	ARMCX3	Q9UH62	379 aa	Predicted RBP	10.33	□□□□□ -0.76
NEO1-208	ENST00000560328	PRDX5	P30044	214 aa		10.33	□□□□□ -0.76
NEO1-208	ENST00000560328	UBXN2A	P68543	259 aa		10.33	□□□□□ -0.76
NEO1-208	ENST00000560328	REST	Q13127	1097 aa		10.33	□□□□□ -0.76
NEO1-208	ENST00000560328	NCAPG2	Q86XI2	1143 aa		10.33	□□□□□ -0.76
NEO1-208	ENST00000560328	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	10.33	□□□□□ -0.76
NEO1-208	ENST00000560328	MRFAP1L1	Q96HT8	127 aa		10.33	□□□□□ -0.76
NEO1-208	ENST00000560328		K7ENM7	598 aa		10.33	□□□□□ -0.76
NEO1-208	ENST00000560328	BMP3	P12645	472 aa		10.33	□□□□□ -0.76
NEO1-208	ENST00000560328	TOB2	Q14106	344 aa	Predicted RBP	10.33	□□□□□ -0.76
NEO1-208	ENST00000560328	SELENOS	Q9BQE4	189 aa		10.33	□□□□□ -0.76
NEO1-208	ENST00000560328	TBC1D10C	Q8IV04	446 aa		10.33	□□□□□ -0.76
NEO1-208	ENST00000560328	UBLCP1	Q8WVY7	318 aa	Predicted RBP	10.33	□□□□□ -0.76
NEO1-208	ENST00000560328	TIGD1	Q96MW7	591 aa		10.33	□□□□□ -0.76
NEO1-208	ENST00000560328	MAGEF1	Q9HAY2	307 aa		10.33	□□□□□ -0.76
NEO1-208	ENST00000560328	MYO3A	Q8NEV4	1616 aa		10.33	□□□□□ -0.76
NEO1-208	ENST00000560328	ADAM9	Q13443	819 aa		10.32	□□□□□ -0.76
NEO1-208	ENST00000560328	DNAJC21	Q5F1R6	531 aa	Known RBP	10.32	□□□□□ -0.76
NEO1-208	ENST00000560328	METTL13	Q8N6R0	699 aa		10.32	□□□□□ -0.76
NEO1-208	ENST00000560328	STAG1	Q8WVM7	1258 aa		10.32	□□□□□ -0.76
NEO1-208	ENST00000560328	PSMD1	Q99460	953 aa		10.32	□□□□□ -0.76
NEO1-208	ENST00000560328	CEP104	O60308	925 aa		10.32	□□□□□ -0.76
NEO1-208	ENST00000560328	AK8	Q96MA6	479 aa		10.32	□□□□□ -0.76
NEO1-208	ENST00000560328	CUEDC2	Q9H467	287 aa		10.32	□□□□□ -0.76
NEO1-208	ENST00000560328	LARS	Q9P2J5	1176 aa	Known RBP	10.32	□□□□□ -0.76
NEO1-208	ENST00000560328	RABGAP1	Q9Y3P9	1069 aa		10.32	□□□□□ -0.76
NEO1-208	ENST00000560328	hCG_1984214	I3L0E3	225 aa		10.32	□□□□□ -0.76
NEO1-208	ENST00000560328	COBL	O75128	1261 aa		10.32	□□□□□ -0.76
NEO1-208	ENST00000560328	CD19	P15391	556 aa		10.32	□□□□□ -0.76
NEO1-208	ENST00000560328	LRCH2	Q5VUJ6	765 aa		10.32	□□□□□ -0.76
NEO1-208	ENST00000560328	ZNF713	Q8N859	430 aa	Predicted RBP	10.32	□□□□□ -0.76
NEO1-208	ENST00000560328	LARP4B	Q92615	738 aa	Known RBP	10.32	□□□□□ -0.76
NEO1-208	ENST00000560328	EEF2KMT	Q96G04	330 aa		10.32	□□□□□ -0.76
NEO1-208	ENST00000560328	TRPC6	Q9Y210	931 aa		10.32	□□□□□ -0.76
NEO1-208	ENST00000560328	ATF5	Q9Y2D1	282 aa	Predicted RBP	10.32	□□□□□ -0.76
NEO1-208	ENST00000560328	ATP2C2	O75185	946 aa		10.32	□□□□□ -0.76
NEO1-208	ENST00000560328	CYP2D6	P10635	497 aa		10.32	□□□□□ -0.76
NEO1-208	ENST00000560328	PABPC4	Q13310	644 aa	Known RBP eCLIP	10.32	□□□□□ -0.76
NEO1-208	ENST00000560328	GOLGA5	Q8TBA6	731 aa		10.32	□□□□□ -0.76
NEO1-208	ENST00000560328	TAF12	Q16514	161 aa		10.32	□□□□□ -0.76
NEO1-208	ENST00000560328	DPCR1	Q3MIW9	517 aa		10.32	□□□□□ -0.76
NEO1-208	ENST00000560328	TTLL6	Q8N841	843 aa		10.32	□□□□□ -0.76
NEO1-208	ENST00000560328	DESI2	Q9BSY9	194 aa		10.32	□□□□□ -0.76
NEO1-208	ENST00000560328	NSRP1	Q9H0G5	558 aa	Known RBP	10.32	□□□□□ -0.76
NEO1-208	ENST00000560328	PCDHB6	Q9Y5E3	794 aa		10.32	□□□□□ -0.76
NEO1-208	ENST00000560328	CPD	O75976	1380 aa		10.31	□□□□□ -0.76

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