RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 ATP2C1P98194 919 aaPredicted RBP16.53■□□□□ 0.24
ZEB1-218ENST00000560196 CDC37Q16543 378 aaPredicted RBP16.53■□□□□ 0.24
ZEB1-218ENST00000560196 SUPT20HL1Q3ZLR7 823 aa16.53■□□□□ 0.24
ZEB1-218ENST00000560196 TPRNQ4KMQ1 711 aa16.53■□□□□ 0.24
ZEB1-218ENST00000560196 FAM160B2Q86V87 743 aa16.53■□□□□ 0.24
ZEB1-218ENST00000560196 CHURC1Q8WUH1 139 aa16.53■□□□□ 0.24
ZEB1-218ENST00000560196 COA7Q96BR5 231 aa16.53■□□□□ 0.24
ZEB1-218ENST00000560196 KIAA1683Q9H0B3 1180 aa16.53■□□□□ 0.24
ZEB1-218ENST00000560196 TNMDQ9H2S6 317 aa16.53■□□□□ 0.24
ZEB1-218ENST00000560196 TSPY26PQ9H489 355 aa16.53■□□□□ 0.24
ZEB1-218ENST00000560196 RAD21O60216 631 aa16.52■□□□□ 0.24
ZEB1-218ENST00000560196 GRIN3BO60391 1043 aa16.52■□□□□ 0.24
ZEB1-218ENST00000560196 KINO60870 393 aaKnown RBP16.52■□□□□ 0.24
ZEB1-218ENST00000560196 STAT2P52630 851 aa16.52■□□□□ 0.24
ZEB1-218ENST00000560196 NONOQ15233 471 aaKnown RBP eCLIP16.52■□□□□ 0.243e-6■■■■□ 21.8
ZEB1-218ENST00000560196 KIAA1755Q5JYT7 1200 aa16.52■□□□□ 0.24
ZEB1-218ENST00000560196 ARL6IP4Q66PJ3 421 aaKnown RBP16.52■□□□□ 0.24
ZEB1-218ENST00000560196 DPY19L2Q6NUT2 758 aa16.52■□□□□ 0.24
ZEB1-218ENST00000560196 SHC4Q6S5L8 630 aa16.52■□□□□ 0.24
ZEB1-218ENST00000560196 SCYL3Q8IZE3 742 aa16.52■□□□□ 0.24
ZEB1-218ENST00000560196 REXO1Q8N1G1 1221 aaKnown RBP16.52■□□□□ 0.24
ZEB1-218ENST00000560196 LPAR1Q92633 364 aa16.52■□□□□ 0.24
ZEB1-218ENST00000560196 TIGD1Q96MW7 591 aa16.52■□□□□ 0.24
ZEB1-218ENST00000560196 FUCA2Q9BTY2 467 aa16.52■□□□□ 0.24
ZEB1-218ENST00000560196 WDR18Q9BV38 432 aa16.52■□□□□ 0.24
ZEB1-218ENST00000560196 GRPEL1Q9HAV7 217 aa16.52■□□□□ 0.24
ZEB1-218ENST00000560196 SCAF8Q9UPN6 1271 aaKnown RBP16.52■□□□□ 0.24
ZEB1-218ENST00000560196 ATAD5Q96QE3 1844 aa16.52■□□□□ 0.23
ZEB1-218ENST00000560196 A0A1B0GVL5 298 aa16.51■□□□□ 0.23
ZEB1-218ENST00000560196 PFKFB1P16118 471 aa16.51■□□□□ 0.23
ZEB1-218ENST00000560196 ATP2B1P20020 1258 aa16.51■□□□□ 0.23
ZEB1-218ENST00000560196 CLK2P49760 499 aaKnown RBP16.51■□□□□ 0.23
ZEB1-218ENST00000560196 NDUFA8P51970 172 aa16.51■□□□□ 0.23
ZEB1-218ENST00000560196 MRPL12P52815 198 aaKnown RBP16.51■□□□□ 0.23
ZEB1-218ENST00000560196 ZNF174Q15697 407 aa16.51■□□□□ 0.23
ZEB1-218ENST00000560196 NOL9Q5SY16 702 aaKnown RBP16.51■□□□□ 0.23
ZEB1-218ENST00000560196 MCTP2Q6DN12 878 aa16.51■□□□□ 0.23
ZEB1-218ENST00000560196 RASGRP4Q8TDF6 673 aa16.51■□□□□ 0.23
ZEB1-218ENST00000560196 CUL5Q93034 780 aa16.51■□□□□ 0.23
ZEB1-218ENST00000560196 NUP88Q99567 741 aaPredicted RBP16.51■□□□□ 0.23
ZEB1-218ENST00000560196 AMNQ9BXJ7 453 aa16.51■□□□□ 0.23
ZEB1-218ENST00000560196 FEM1BQ9UK73 627 aa16.51■□□□□ 0.23
ZEB1-218ENST00000560196 PRR12Q9ULL5 1215 aa16.51■□□□□ 0.23
ZEB1-218ENST00000560196 LAD1O00515 517 aa16.5■□□□□ 0.23
ZEB1-218ENST00000560196 WNT7AO00755 349 aa16.5■□□□□ 0.23
ZEB1-218ENST00000560196 FAM83BQ5T0W9 1011 aa16.5■□□□□ 0.23
ZEB1-218ENST00000560196 USP50Q70EL3 339 aaPredicted RBP16.5■□□□□ 0.23
ZEB1-218ENST00000560196 FBXO11Q86XK2 927 aa16.5■□□□□ 0.23
ZEB1-218ENST00000560196 ELOA2Q8IYF1 753 aaPredicted RBP16.5■□□□□ 0.23
ZEB1-218ENST00000560196 C4orf32Q8N8J7 132 aa16.5■□□□□ 0.23
ZEB1-218ENST00000560196 CLIC6Q96NY7 704 aa16.5■□□□□ 0.23
ZEB1-218ENST00000560196 DOCK1Q14185 1865 aa16.5■□□□□ 0.23
ZEB1-218ENST00000560196 SSC5DA1L4H1 1573 aa16.49■□□□□ 0.23
ZEB1-218ENST00000560196 WDR46O15213 610 aaKnown RBP16.49■□□□□ 0.23
ZEB1-218ENST00000560196 ZNF202O95125 648 aa16.49■□□□□ 0.23
ZEB1-218ENST00000560196 CCDC192P0DO97 292 aa16.49■□□□□ 0.23
ZEB1-218ENST00000560196 INPP5BP32019 993 aa16.49■□□□□ 0.23
ZEB1-218ENST00000560196 SYKP43405 635 aa16.49■□□□□ 0.23
ZEB1-218ENST00000560196 USP14P54578 494 aa16.49■□□□□ 0.23
ZEB1-218ENST00000560196 IKQ13123 557 aaPredicted RBP16.49■□□□□ 0.23
ZEB1-218ENST00000560196 PTGDRQ13258 359 aa16.49■□□□□ 0.23
ZEB1-218ENST00000560196 GPR162Q16538 588 aa16.49■□□□□ 0.23
ZEB1-218ENST00000560196 INF2Q27J81 1249 aa16.49■□□□□ 0.23
ZEB1-218ENST00000560196 SPICE1Q8N0Z3 855 aa16.49■□□□□ 0.23
ZEB1-218ENST00000560196 ZC3H15Q8WU90 426 aaKnown RBP16.49■□□□□ 0.23
ZEB1-218ENST00000560196 KLRG1Q96E93 195 aa16.49■□□□□ 0.23
ZEB1-218ENST00000560196 FEZ1Q99689 392 aa16.49■□□□□ 0.23
ZEB1-218ENST00000560196 GLIS2Q9BZE0 524 aaPredicted RBP16.49■□□□□ 0.23
ZEB1-218ENST00000560196 RANBP17Q9H2T7 1088 aaKnown RBP16.49■□□□□ 0.23
ZEB1-218ENST00000560196 PSTPIP2Q9H939 334 aa16.49■□□□□ 0.23
ZEB1-218ENST00000560196 AS3MTQ9HBK9 375 aa16.49■□□□□ 0.23
ZEB1-218ENST00000560196 FAM13BQ9NYF5 915 aa16.49■□□□□ 0.23
ZEB1-218ENST00000560196 PCDHA1Q9Y5I3 950 aa16.49■□□□□ 0.23
ZEB1-218ENST00000560196 PRPHP41219 470 aa16.48■□□□□ 0.23
ZEB1-218ENST00000560196 NEK8Q86SG6 692 aa16.48■□□□□ 0.23
ZEB1-218ENST00000560196 DCPSQ96C86 337 aaKnown RBP16.48■□□□□ 0.23
ZEB1-218ENST00000560196 WRNIP1Q96S55 665 aa16.48■□□□□ 0.23
ZEB1-218ENST00000560196 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.48■□□□□ 0.23
ZEB1-218ENST00000560196 KCNH3Q9ULD8 1083 aa16.48■□□□□ 0.23
ZEB1-218ENST00000560196 GLTPD2A6NH11 291 aa16.47■□□□□ 0.23
ZEB1-218ENST00000560196 PTPRAP18433 802 aa16.47■□□□□ 0.23
ZEB1-218ENST00000560196 MCM7P33993 719 aa16.47■□□□□ 0.23
ZEB1-218ENST00000560196 CAMK4Q16566 473 aa16.47■□□□□ 0.23
ZEB1-218ENST00000560196 JAKMIP3Q5VZ66 844 aa16.47■□□□□ 0.23
ZEB1-218ENST00000560196 TBCKQ8TEA7 893 aa16.47■□□□□ 0.23
ZEB1-218ENST00000560196 C12orf42Q96LP6 360 aa16.47■□□□□ 0.23
ZEB1-218ENST00000560196 NAP1L4Q99733 375 aaKnown RBP16.47■□□□□ 0.23
ZEB1-218ENST00000560196 CSRNP2Q9H175 543 aa16.47■□□□□ 0.23
ZEB1-218ENST00000560196 RBSNQ9H1K0 784 aa16.47■□□□□ 0.23
ZEB1-218ENST00000560196 PICK1Q9NRD5 415 aa16.47■□□□□ 0.23
ZEB1-218ENST00000560196 BIN2Q9UBW5 565 aaPredicted RBP16.47■□□□□ 0.23
ZEB1-218ENST00000560196 XRCC6P12956 609 aaKnown RBP eCLIP16.46■□□□□ 0.231e-8■■■■■ 35.6
ZEB1-218ENST00000560196 LONP1P36776 959 aaKnown RBP16.46■□□□□ 0.23
ZEB1-218ENST00000560196 GRIN1Q05586 938 aa16.46■□□□□ 0.23
ZEB1-218ENST00000560196 AP3B2Q13367 1082 aa16.46■□□□□ 0.23
ZEB1-218ENST00000560196 CCDC84Q86UT8 332 aaPredicted RBP16.46■□□□□ 0.23
ZEB1-218ENST00000560196 SULF1Q8IWU6 871 aa16.46■□□□□ 0.23
ZEB1-218ENST00000560196 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.46■□□□□ 0.23
ZEB1-218ENST00000560196 SDF4Q9BRK5 362 aa16.46■□□□□ 0.23
ZEB1-218ENST00000560196 TMEM260Q9NX78 707 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms