RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 BTBD19C9JJ37 291 aa10.88□□□□□ -0.67
HERC1-206ENST00000559996 RAD21O60216 631 aa10.88□□□□□ -0.67
HERC1-206ENST00000559996 DHX16O60231 1041 aaKnown RBP10.88□□□□□ -0.67
HERC1-206ENST00000559996 GTF2A2P52657 109 aa10.88□□□□□ -0.67
HERC1-206ENST00000559996 SNAP25P60880 206 aa10.88□□□□□ -0.67
HERC1-206ENST00000559996 HTRA3P83110 453 aa10.88□□□□□ -0.67
HERC1-206ENST00000559996 SSRP1Q08945 709 aaKnown RBP10.88□□□□□ -0.67
HERC1-206ENST00000559996 PDAP1Q13442 181 aaKnown RBP10.88□□□□□ -0.67
HERC1-206ENST00000559996 SNAPC2Q13487 334 aa10.88□□□□□ -0.67
HERC1-206ENST00000559996 CCDC96Q2M329 555 aa10.88□□□□□ -0.67
HERC1-206ENST00000559996 SYDE2Q5VT97 1194 aa10.88□□□□□ -0.67
HERC1-206ENST00000559996 CYP4F22Q6NT55 531 aa10.88□□□□□ -0.67
HERC1-206ENST00000559996 TYW1BQ6NUM6 668 aa10.88□□□□□ -0.67
HERC1-206ENST00000559996 FAM43AQ8N2R8 423 aa10.88□□□□□ -0.67
HERC1-206ENST00000559996 DDX11Q96FC9 970 aa10.88□□□□□ -0.67
HERC1-206ENST00000559996 P2RX7Q99572 595 aaKnown RBP10.88□□□□□ -0.67
HERC1-206ENST00000559996 SLC26A6Q9BXS9 759 aa10.88□□□□□ -0.67
HERC1-206ENST00000559996 RANBP17Q9H2T7 1088 aaKnown RBP10.88□□□□□ -0.67
HERC1-206ENST00000559996 VAT1LQ9HCJ6 419 aa10.88□□□□□ -0.67
HERC1-206ENST00000559996 ORC3Q9UBD5 711 aaPredicted RBP10.88□□□□□ -0.67
HERC1-206ENST00000559996 PPP1R9AQ9ULJ8 1098 aa10.88□□□□□ -0.67
HERC1-206ENST00000559996 AGTPBP1Q9UPW5 1226 aa10.88□□□□□ -0.67
HERC1-206ENST00000559996 SPDYE16A6NNV3 312 aaPredicted RBP10.87□□□□□ -0.67
HERC1-206ENST00000559996 USP17L15C9J2P7 530 aa10.87□□□□□ -0.67
HERC1-206ENST00000559996 USP17L13C9JLJ4 530 aa10.87□□□□□ -0.67
HERC1-206ENST00000559996 USP17L11C9JVI0 530 aa10.87□□□□□ -0.67
HERC1-206ENST00000559996 USP17L18D6R9N7 530 aa10.87□□□□□ -0.67
HERC1-206ENST00000559996 USP17L22D6RA61 530 aa10.87□□□□□ -0.67
HERC1-206ENST00000559996 USP17L17D6RBQ6 530 aa10.87□□□□□ -0.67
HERC1-206ENST00000559996 USP17L19D6RCP7 530 aa10.87□□□□□ -0.67
HERC1-206ENST00000559996 USP17L20D6RJB6 530 aa10.87□□□□□ -0.67
HERC1-206ENST00000559996 SNPHO15079 494 aa10.87□□□□□ -0.67
HERC1-206ENST00000559996 PEX10O60683 326 aa10.87□□□□□ -0.67
HERC1-206ENST00000559996 CNMDO75829 334 aa10.87□□□□□ -0.67
HERC1-206ENST00000559996 CETPP11597 493 aa10.87□□□□□ -0.67
HERC1-206ENST00000559996 TM4SF4P48230 202 aa10.87□□□□□ -0.67
HERC1-206ENST00000559996 STAT2P52630 851 aa10.87□□□□□ -0.67
HERC1-206ENST00000559996 USP17L24Q0WX57 530 aa10.87□□□□□ -0.67
HERC1-206ENST00000559996 COG2Q14746 738 aa10.87□□□□□ -0.67
HERC1-206ENST00000559996 NPY5RQ15761 445 aa10.87□□□□□ -0.67
HERC1-206ENST00000559996 PFKFB3Q16875 520 aaPredicted RBP10.87□□□□□ -0.67
HERC1-206ENST00000559996 DEFB115Q30KQ5 88 aa10.87□□□□□ -0.67
HERC1-206ENST00000559996 LBX2Q6XYB7 198 aa10.87□□□□□ -0.67
HERC1-206ENST00000559996 GADL1Q6ZQY3 521 aa10.87□□□□□ -0.67
HERC1-206ENST00000559996 FASTKD5Q7L8L6 764 aaKnown RBP10.87□□□□□ -0.67
HERC1-206ENST00000559996 FAM160B2Q86V87 743 aa10.87□□□□□ -0.67
HERC1-206ENST00000559996 PRPF38AQ8NAV1 312 aaKnown RBP10.87□□□□□ -0.67
HERC1-206ENST00000559996 CHURC1Q8WUH1 139 aa10.87□□□□□ -0.67
HERC1-206ENST00000559996 TMOD4Q9NZQ9 345 aa10.87□□□□□ -0.67
HERC1-206ENST00000559996 ABT1Q9ULW3 272 aaKnown RBP10.87□□□□□ -0.67
HERC1-206ENST00000559996 ZDHHC9Q9Y397 364 aa10.87□□□□□ -0.67
HERC1-206ENST00000559996 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.87□□□□□ -0.67
HERC1-206ENST00000559996 CCL15-CCL14A0A0B4J2E2 113 aa10.86□□□□□ -0.67
HERC1-206ENST00000559996 PNMA6FA0A0J9YX94 578 aa10.86□□□□□ -0.67
HERC1-206ENST00000559996 IGF2BP3O00425 579 aaKnown RBP eCLIP10.86□□□□□ -0.67
HERC1-206ENST00000559996 VWA5AO00534 786 aa10.86□□□□□ -0.67
HERC1-206ENST00000559996 CPLX1O14810 134 aa10.86□□□□□ -0.67
HERC1-206ENST00000559996 ZBTB5O15062 677 aa10.86□□□□□ -0.67
HERC1-206ENST00000559996 DEXIO95424 95 aa10.86□□□□□ -0.67
HERC1-206ENST00000559996 TAL1P17542 331 aaPredicted RBP10.86□□□□□ -0.67
HERC1-206ENST00000559996 HMGN5P82970 282 aaKnown RBP10.86□□□□□ -0.67
HERC1-206ENST00000559996 PKP1Q13835 747 aa10.86□□□□□ -0.67
HERC1-206ENST00000559996 CCL15Q16663 113 aa10.86□□□□□ -0.67
HERC1-206ENST00000559996 QRICH1Q2TAL8 776 aa10.86□□□□□ -0.67
HERC1-206ENST00000559996 Q3C1V9 767 aa10.86□□□□□ -0.67
HERC1-206ENST00000559996 OTUD7BQ6GQQ9 843 aa10.86□□□□□ -0.67
HERC1-206ENST00000559996 ANKRD23Q86SG2 305 aa10.86□□□□□ -0.67
HERC1-206ENST00000559996 PIBF1Q8WXW3 757 aa10.86□□□□□ -0.67
HERC1-206ENST00000559996 CCDC102AQ96A19 550 aa10.86□□□□□ -0.67
HERC1-206ENST00000559996 KIFC2Q96AC6 838 aa10.86□□□□□ -0.67
HERC1-206ENST00000559996 ATG4CQ96DT6 458 aa10.86□□□□□ -0.67
HERC1-206ENST00000559996 SLF1Q9BQI6 1058 aa10.86□□□□□ -0.67
HERC1-206ENST00000559996 ASCC2Q9H1I8 757 aaPredicted RBP10.86□□□□□ -0.67
HERC1-206ENST00000559996 R3HDMLQ9H3Y0 253 aa10.86□□□□□ -0.67
HERC1-206ENST00000559996 SLC38A10Q9HBR0 1119 aa10.86□□□□□ -0.67
HERC1-206ENST00000559996 CWC22Q9HCG8 908 aaKnown RBP10.86□□□□□ -0.67
HERC1-206ENST00000559996 SMC3Q9UQE7 1217 aa10.86□□□□□ -0.67
HERC1-206ENST00000559996 SLC45A1Q9Y2W3 748 aa10.86□□□□□ -0.67
HERC1-206ENST00000559996 MYPNQ86TC9 1320 aa10.85□□□□□ -0.67
HERC1-206ENST00000559996 STXBP3O00186 592 aa10.85□□□□□ -0.67
HERC1-206ENST00000559996 OPLAHO14841 1288 aa10.85□□□□□ -0.67
HERC1-206ENST00000559996 AOC2O75106 756 aa10.85□□□□□ -0.67
HERC1-206ENST00000559996 FLOT1O75955 427 aa10.85□□□□□ -0.67
HERC1-206ENST00000559996 CDKL5O76039 1030 aa10.85□□□□□ -0.67
HERC1-206ENST00000559996 SCG2P13521 617 aa10.85□□□□□ -0.67
HERC1-206ENST00000559996 SYT1P21579 422 aa10.85□□□□□ -0.67
HERC1-206ENST00000559996 KIF23Q02241 960 aaPredicted RBP10.85□□□□□ -0.67
HERC1-206ENST00000559996 TMEM132BQ14DG7 1078 aa10.85□□□□□ -0.67
HERC1-206ENST00000559996 CDC37Q16543 378 aaPredicted RBP10.85□□□□□ -0.67
HERC1-206ENST00000559996 WWC2Q6AWC2 1192 aa10.85□□□□□ -0.67
HERC1-206ENST00000559996 MARVELD3Q96A59 401 aa10.85□□□□□ -0.67
HERC1-206ENST00000559996 COA7Q96BR5 231 aa10.85□□□□□ -0.67
HERC1-206ENST00000559996 RRP36Q96EU6 259 aaKnown RBP10.85□□□□□ -0.67
HERC1-206ENST00000559996 TANGO6Q9C0B7 1094 aa10.85□□□□□ -0.67
HERC1-206ENST00000559996 TXNRD2Q9NNW7 524 aa10.85□□□□□ -0.67
HERC1-206ENST00000559996 HOXC10Q9NYD6 342 aa10.85□□□□□ -0.67
HERC1-206ENST00000559996 BTBD7Q9P203 1132 aa10.85□□□□□ -0.67
HERC1-206ENST00000559996 RBPJLQ9UBG7 517 aa10.85□□□□□ -0.67
HERC1-206ENST00000559996 RIPK3Q9Y572 518 aa10.85□□□□□ -0.67
HERC1-206ENST00000559996 MYH6P13533 1939 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms