RNA–Protein interactions for RNA: ENST00000559774.6

LRRC28-215, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-215ENST00000559774 SLC16A2P36021 539 aa10.06□□□□□ -0.8
LRRC28-215ENST00000559774 STAT3P40763 770 aa10.06□□□□□ -0.8
LRRC28-215ENST00000559774 ERVK-9P63128 1117 aa10.06□□□□□ -0.8
LRRC28-215ENST00000559774 ERVK-24P63145 666 aa10.06□□□□□ -0.8
LRRC28-215ENST00000559774 HMGN5P82970 282 aaKnown RBP10.06□□□□□ -0.8
LRRC28-215ENST00000559774 AKAP17AQ02040 695 aaKnown RBP10.06□□□□□ -0.8
LRRC28-215ENST00000559774 CRHR2Q13324 411 aa10.06□□□□□ -0.8
LRRC28-215ENST00000559774 CUL4AQ13619 759 aa10.06□□□□□ -0.8
LRRC28-215ENST00000559774 RASGRP2Q7LDG7 609 aa10.06□□□□□ -0.8
LRRC28-215ENST00000559774 NBPF11Q86T75 865 aa10.06□□□□□ -0.8
LRRC28-215ENST00000559774 RIOX2Q8IUF8 465 aa10.06□□□□□ -0.8
LRRC28-215ENST00000559774 CCDC144CPQ8IYA2 1237 aa10.06□□□□□ -0.8
LRRC28-215ENST00000559774 RGS22Q8NE09 1264 aa10.06□□□□□ -0.8
LRRC28-215ENST00000559774 WASF1Q92558 559 aa10.06□□□□□ -0.8
LRRC28-215ENST00000559774 INTS4Q96HW7 963 aaKnown RBP10.06□□□□□ -0.8
LRRC28-215ENST00000559774 AMNQ9BXJ7 453 aa10.06□□□□□ -0.8
LRRC28-215ENST00000559774 SPATC1LQ9H0A9 340 aa10.06□□□□□ -0.8
LRRC28-215ENST00000559774 MROH8Q9H579 483 aa10.06□□□□□ -0.8
LRRC28-215ENST00000559774 MAP3K20Q9NYL2 800 aaKnown RBP10.06□□□□□ -0.8
LRRC28-215ENST00000559774 FBXO40Q9UH90 709 aa10.06□□□□□ -0.8
LRRC28-215ENST00000559774 ZNF214Q9UL59 606 aaPredicted RBP10.06□□□□□ -0.8
LRRC28-215ENST00000559774 KIF3AQ9Y496 699 aa10.06□□□□□ -0.8
LRRC28-215ENST00000559774 STK36Q9NRP7 1315 aa10.06□□□□□ -0.8
LRRC28-215ENST00000559774 STRNO43815 780 aa10.05□□□□□ -0.8
LRRC28-215ENST00000559774 TRPA1O75762 1119 aa10.05□□□□□ -0.8
LRRC28-215ENST00000559774 CD2BP2O95400 341 aaKnown RBP10.05□□□□□ -0.8
LRRC28-215ENST00000559774 DEXIO95424 95 aa10.05□□□□□ -0.8
LRRC28-215ENST00000559774 PDIA4P13667 645 aaKnown RBP10.05□□□□□ -0.8
LRRC28-215ENST00000559774 MAPK4P31152 587 aa10.05□□□□□ -0.8
LRRC28-215ENST00000559774 CCT2P78371 535 aaKnown RBP10.05□□□□□ -0.8
LRRC28-215ENST00000559774 SSRP1Q08945 709 aaKnown RBP10.05□□□□□ -0.8
LRRC28-215ENST00000559774 STK3Q13188 491 aa10.05□□□□□ -0.8
LRRC28-215ENST00000559774 BECN1Q14457 450 aa10.05□□□□□ -0.8
LRRC28-215ENST00000559774 TMEM132BQ14DG7 1078 aa10.05□□□□□ -0.8
LRRC28-215ENST00000559774 ARHGEF6Q15052 776 aa10.05□□□□□ -0.8
LRRC28-215ENST00000559774 CDC37Q16543 378 aaPredicted RBP10.05□□□□□ -0.8
LRRC28-215ENST00000559774 FBXO11Q86XK2 927 aa10.05□□□□□ -0.8
LRRC28-215ENST00000559774 HSCBQ8IWL3 235 aa10.05□□□□□ -0.8
LRRC28-215ENST00000559774 ABRAQ8N0Z2 381 aa10.05□□□□□ -0.8
LRRC28-215ENST00000559774 CHST13Q8NET6 341 aa10.05□□□□□ -0.8
LRRC28-215ENST00000559774 CCDC12Q8WUD4 166 aaPredicted RBP10.05□□□□□ -0.8
LRRC28-215ENST00000559774 LARP6Q9BRS8 491 aaKnown RBP10.05□□□□□ -0.8
LRRC28-215ENST00000559774 GLT8D2Q9H1C3 349 aa10.05□□□□□ -0.8
LRRC28-215ENST00000559774 NCOA5Q9HCD5 579 aaKnown RBP10.05□□□□□ -0.8
LRRC28-215ENST00000559774 SH3GLB2Q9NR46 395 aa10.05□□□□□ -0.8
LRRC28-215ENST00000559774 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.05□□□□□ -0.8
LRRC28-215ENST00000559774 V9GY48 417 aaPredicted RBP10.05□□□□□ -0.8
LRRC28-215ENST00000559774 ZNF536O15090 1300 aa10.05□□□□□ -0.8
LRRC28-215ENST00000559774 ABCB11O95342 1321 aa10.05□□□□□ -0.8
LRRC28-215ENST00000559774 CNTNAP5Q8WYK1 1306 aa10.05□□□□□ -0.8
LRRC28-215ENST00000559774 CEP350Q5VT06 3117 aa10.05□□□□□ -0.8
LRRC28-215ENST00000559774 CNMDO75829 334 aa10.04□□□□□ -0.8
LRRC28-215ENST00000559774 LARGE1O95461 756 aa10.04□□□□□ -0.8
LRRC28-215ENST00000559774 GNRH1P01148 92 aa10.04□□□□□ -0.8
LRRC28-215ENST00000559774 PFKFB3Q16875 520 aaPredicted RBP10.04□□□□□ -0.8
LRRC28-215ENST00000559774 SLC35G1Q2M3R5 365 aa10.04□□□□□ -0.8
LRRC28-215ENST00000559774 QRICH1Q2TAL8 776 aa10.04□□□□□ -0.8
LRRC28-215ENST00000559774 PPP1R18Q6NYC8 613 aa10.04□□□□□ -0.8
LRRC28-215ENST00000559774 POTEEQ6S8J3 1075 aa10.04□□□□□ -0.8
LRRC28-215ENST00000559774 SMARCC2Q8TAQ2 1214 aa10.04□□□□□ -0.8
LRRC28-215ENST00000559774 PIGSQ96S52 555 aa10.04□□□□□ -0.8
LRRC28-215ENST00000559774 VAT1LQ9HCJ6 419 aa10.04□□□□□ -0.8
LRRC28-215ENST00000559774 TXNRD2Q9NNW7 524 aa10.04□□□□□ -0.8
LRRC28-215ENST00000559774 BTBD7Q9P203 1132 aa10.04□□□□□ -0.8
LRRC28-215ENST00000559774 MRPL11Q9Y3B7 192 aaKnown RBP10.04□□□□□ -0.8
LRRC28-215ENST00000559774 GPR25O00155 361 aa10.03□□□□□ -0.8
LRRC28-215ENST00000559774 CTDNEP1O95476 244 aa10.03□□□□□ -0.8
LRRC28-215ENST00000559774 SCG2P13521 617 aa10.03□□□□□ -0.8
LRRC28-215ENST00000559774 XBP1P17861 261 aa10.03□□□□□ -0.8
LRRC28-215ENST00000559774 SP3Q02447 781 aa10.03□□□□□ -0.8
LRRC28-215ENST00000559774 GHRHRQ02643 423 aa10.03□□□□□ -0.8
LRRC28-215ENST00000559774 KIF22Q14807 665 aa10.03□□□□□ -0.8
LRRC28-215ENST00000559774 Q3C1V9 767 aa10.03□□□□□ -0.8
LRRC28-215ENST00000559774 MCTP2Q6DN12 878 aa10.03□□□□□ -0.8
LRRC28-215ENST00000559774 SNRNP48Q6IEG0 339 aaKnown RBP10.03□□□□□ -0.8
LRRC28-215ENST00000559774 GALNT17Q6IS24 598 aa10.03□□□□□ -0.8
LRRC28-215ENST00000559774 NOL8Q76FK4 1167 aaKnown RBP10.03□□□□□ -0.8
LRRC28-215ENST00000559774 MCF2L2Q86YR7 1114 aa10.03□□□□□ -0.8
LRRC28-215ENST00000559774 RAB11FIP4Q86YS3 637 aa10.03□□□□□ -0.8
LRRC28-215ENST00000559774 CCDC83Q8IWF9 413 aa10.03□□□□□ -0.8
LRRC28-215ENST00000559774 ANKRD13CQ8N6S4 541 aa10.03□□□□□ -0.8
LRRC28-215ENST00000559774 NECAB1Q8N987 351 aa10.03□□□□□ -0.8
LRRC28-215ENST00000559774 NSUN7Q8NE18 718 aaKnown RBP10.03□□□□□ -0.8
LRRC28-215ENST00000559774 PAGR1Q9BTK6 254 aa10.03□□□□□ -0.8
LRRC28-215ENST00000559774 SLC26A6Q9BXS9 759 aa10.03□□□□□ -0.8
LRRC28-215ENST00000559774 MOV10L1Q9BXT6 1211 aaKnown RBP10.03□□□□□ -0.8
LRRC28-215ENST00000559774 CPVLQ9H3G5 476 aa10.03□□□□□ -0.8
LRRC28-215ENST00000559774 RAVER2Q9HCJ3 691 aaKnown RBP10.03□□□□□ -0.8
LRRC28-215ENST00000559774 BARHL2Q9NY43 387 aa10.03□□□□□ -0.8
LRRC28-215ENST00000559774 CCPG1Q9ULG6 757 aa10.03□□□□□ -0.8
LRRC28-215ENST00000559774 PCDHA1Q9Y5I3 950 aa10.03□□□□□ -0.8
LRRC28-215ENST00000559774 ESYT2A0FGR8 921 aa10.02□□□□□ -0.81
LRRC28-215ENST00000559774 PTPDC1A2A3K4 754 aa10.02□□□□□ -0.81
LRRC28-215ENST00000559774 FKTNO75072 461 aa10.02□□□□□ -0.81
LRRC28-215ENST00000559774 TBC1D8O95759 1140 aa10.02□□□□□ -0.81
LRRC28-215ENST00000559774 PRMT2P55345 433 aa10.02□□□□□ -0.81
LRRC28-215ENST00000559774 LACTBP83111 547 aaPredicted RBP10.02□□□□□ -0.81
LRRC28-215ENST00000559774 ST3GAL1Q11201 340 aa10.02□□□□□ -0.81
LRRC28-215ENST00000559774 PLS1Q14651 629 aa10.02□□□□□ -0.81
LRRC28-215ENST00000559774 PKN1Q16512 942 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms