RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 TMEM260Q9NX78 707 aa19.9■□□□□ 0.78
CHRNA3-206ENST00000559658 PCDHA6Q9UN73 950 aa19.9■□□□□ 0.78
CHRNA3-206ENST00000559658 PCDHA8Q9Y5H6 950 aa19.9■□□□□ 0.78
CHRNA3-206ENST00000559658 GOLGA6L22H0YM25 854 aa19.9■□□□□ 0.78
CHRNA3-206ENST00000559658 IRF6O14896 467 aa19.9■□□□□ 0.78
CHRNA3-206ENST00000559658 ATP2B1P20020 1258 aa19.9■□□□□ 0.78
CHRNA3-206ENST00000559658 ANKRD13AQ8IZ07 590 aa19.9■□□□□ 0.78
CHRNA3-206ENST00000559658 PGBD1Q96JS3 809 aa19.9■□□□□ 0.78
CHRNA3-206ENST00000559658 SPATA32Q96LK8 384 aa19.9■□□□□ 0.78
CHRNA3-206ENST00000559658 GJA5P36382 358 aa19.89■□□□□ 0.77
CHRNA3-206ENST00000559658 UBE2SQ16763 222 aa19.89■□□□□ 0.77
CHRNA3-206ENST00000559658 DAGLBQ8NCG7 672 aa19.89■□□□□ 0.77
CHRNA3-206ENST00000559658 RANBP17Q9H2T7 1088 aaKnown RBP19.89■□□□□ 0.77
CHRNA3-206ENST00000559658 PCDHA1Q9Y5I3 950 aa19.89■□□□□ 0.77
CHRNA3-206ENST00000559658 USP14P54578 494 aa19.88■□□□□ 0.77
CHRNA3-206ENST00000559658 TREML2Q5T2D2 321 aa19.88■□□□□ 0.77
CHRNA3-206ENST00000559658 C12orf42Q96LP6 360 aa19.88■□□□□ 0.77
CHRNA3-206ENST00000559658 FEM1BQ9UK73 627 aa19.88■□□□□ 0.77
CHRNA3-206ENST00000559658 PCDHB6Q9Y5E3 794 aa19.88■□□□□ 0.77
CHRNA3-206ENST00000559658 MRVI1Q9Y6F6 885 aa19.88■□□□□ 0.77
CHRNA3-206ENST00000559658 SPDYE5A6NIY4 337 aa19.88■□□□□ 0.77
CHRNA3-206ENST00000559658 OPLAHO14841 1288 aa19.88■□□□□ 0.77
CHRNA3-206ENST00000559658 TRAK2O60296 914 aa19.88■□□□□ 0.77
CHRNA3-206ENST00000559658 FLOT1O75955 427 aa19.88■□□□□ 0.77
CHRNA3-206ENST00000559658 CALML3P27482 149 aa19.88■□□□□ 0.77
CHRNA3-206ENST00000559658 SF3A1Q15459 793 aaKnown RBP19.88■□□□□ 0.77
CHRNA3-206ENST00000559658 LDLRAD1Q5T700 205 aa19.88■□□□□ 0.77
CHRNA3-206ENST00000559658 ZNF396Q96N95 335 aaPredicted RBP19.88■□□□□ 0.77
CHRNA3-206ENST00000559658 SLF1Q9BQI6 1058 aa19.88■□□□□ 0.77
CHRNA3-206ENST00000559658 BRMS1Q9HCU9 246 aa19.88■□□□□ 0.77
CHRNA3-206ENST00000559658 RTEL1Q9NZ71 1219 aa19.88■□□□□ 0.77
CHRNA3-206ENST00000559658 BIN2Q9UBW5 565 aaPredicted RBP19.88■□□□□ 0.77
CHRNA3-206ENST00000559658 ZNF536O15090 1300 aa19.87■□□□□ 0.77
CHRNA3-206ENST00000559658 hCG_1984214I3L0E3 225 aa19.87■□□□□ 0.77
CHRNA3-206ENST00000559658 NASPP49321 788 aaPredicted RBP19.87■□□□□ 0.77
CHRNA3-206ENST00000559658 ADCY7P51828 1080 aa19.87■□□□□ 0.77
CHRNA3-206ENST00000559658 ANO1Q5XXA6 986 aa19.87■□□□□ 0.77
CHRNA3-206ENST00000559658 FBXO11Q86XK2 927 aa19.87■□□□□ 0.77
CHRNA3-206ENST00000559658 ZNF713Q8N859 430 aaPredicted RBP19.87■□□□□ 0.77
CHRNA3-206ENST00000559658 CHURC1Q8WUH1 139 aa19.87■□□□□ 0.77
CHRNA3-206ENST00000559658 OPTNQ96CV9 577 aa19.87■□□□□ 0.77
CHRNA3-206ENST00000559658 ESYT2A0FGR8 921 aa19.86■□□□□ 0.77
CHRNA3-206ENST00000559658 PLA2G6O60733 806 aa19.86■□□□□ 0.77
CHRNA3-206ENST00000559658 CELF2O95319 508 aaKnown RBP19.86■□□□□ 0.77
CHRNA3-206ENST00000559658 PTPAQ15257 358 aa19.86■□□□□ 0.77
CHRNA3-206ENST00000559658 JAKMIP3Q5VZ66 844 aa19.86■□□□□ 0.77
CHRNA3-206ENST00000559658 ARMC9Q7Z3E5 817 aa19.86■□□□□ 0.77
CHRNA3-206ENST00000559658 FAM160B2Q86V87 743 aa19.86■□□□□ 0.77
CHRNA3-206ENST00000559658 LINC00301Q8NCQ3 95 aa19.86■□□□□ 0.77
CHRNA3-206ENST00000559658 P2RX7Q99572 595 aaKnown RBP19.86■□□□□ 0.77
CHRNA3-206ENST00000559658 AMNQ9BXJ7 453 aa19.86■□□□□ 0.77
CHRNA3-206ENST00000559658 SCAND2PQ9GZW5 306 aaPredicted RBP19.86■□□□□ 0.77
CHRNA3-206ENST00000559658 POLR3EQ9NVU0 708 aa19.86■□□□□ 0.77
CHRNA3-206ENST00000559658 ITGBL1O95965 494 aaPredicted RBP19.86■□□□□ 0.77
CHRNA3-206ENST00000559658 ERO1BQ86YB8 467 aa19.86■□□□□ 0.77
CHRNA3-206ENST00000559658 CCDC12Q8WUD4 166 aaPredicted RBP19.86■□□□□ 0.77
CHRNA3-206ENST00000559658 ATG4CQ96DT6 458 aa19.86■□□□□ 0.77
CHRNA3-206ENST00000559658 AGBL1Q96MI9 1066 aa19.86■□□□□ 0.77
CHRNA3-206ENST00000559658 C6orf50Q9HD87 102 aa19.86■□□□□ 0.77
CHRNA3-206ENST00000559658 RCOR1Q9UKL0 485 aa19.86■□□□□ 0.77
CHRNA3-206ENST00000559658 CFAP45Q9UL16 551 aa19.86■□□□□ 0.77
CHRNA3-206ENST00000559658 PPP1R9AQ9ULJ8 1098 aa19.86■□□□□ 0.77
CHRNA3-206ENST00000559658 TRPM7Q96QT4 1865 aa19.86■□□□□ 0.77
CHRNA3-206ENST00000559658 ELP1O95163 1332 aa19.85■□□□□ 0.77
CHRNA3-206ENST00000559658 USP17L15C9J2P7 530 aa19.85■□□□□ 0.77
CHRNA3-206ENST00000559658 C19orf81C9J6K1 198 aa19.85■□□□□ 0.77
CHRNA3-206ENST00000559658 USP17L13C9JLJ4 530 aa19.85■□□□□ 0.77
CHRNA3-206ENST00000559658 USP17L11C9JVI0 530 aa19.85■□□□□ 0.77
CHRNA3-206ENST00000559658 USP17L18D6R9N7 530 aa19.85■□□□□ 0.77
CHRNA3-206ENST00000559658 USP17L22D6RA61 530 aa19.85■□□□□ 0.77
CHRNA3-206ENST00000559658 USP17L17D6RBQ6 530 aa19.85■□□□□ 0.77
CHRNA3-206ENST00000559658 USP17L19D6RCP7 530 aa19.85■□□□□ 0.77
CHRNA3-206ENST00000559658 USP17L20D6RJB6 530 aa19.85■□□□□ 0.77
CHRNA3-206ENST00000559658 PPATQ06203 517 aa19.85■□□□□ 0.77
CHRNA3-206ENST00000559658 USP17L24Q0WX57 530 aa19.85■□□□□ 0.77
CHRNA3-206ENST00000559658 SH3D19Q5HYK7 790 aa19.85■□□□□ 0.77
CHRNA3-206ENST00000559658 CST9Q5W186 159 aa19.85■□□□□ 0.77
CHRNA3-206ENST00000559658 PPP1R18Q6NYC8 613 aa19.85■□□□□ 0.77
CHRNA3-206ENST00000559658 USP17L6PQ6QN14 398 aa19.85■□□□□ 0.77
CHRNA3-206ENST00000559658 MYH7BA7E2Y1 1941 aa19.84■□□□□ 0.77
CHRNA3-206ENST00000559658 PEX10O60683 326 aa19.84■□□□□ 0.77
CHRNA3-206ENST00000559658 MARCKSP29966 332 aaPredicted RBP19.84■□□□□ 0.77
CHRNA3-206ENST00000559658 INF2Q27J81 1249 aa19.84■□□□□ 0.77
CHRNA3-206ENST00000559658 REXO1Q8N1G1 1221 aaKnown RBP19.84■□□□□ 0.77
CHRNA3-206ENST00000559658 RIC8AQ9NPQ8 531 aa19.84■□□□□ 0.77
CHRNA3-206ENST00000559658 DDX49Q9Y6V7 483 aaKnown RBP19.84■□□□□ 0.77
CHRNA3-206ENST00000559658 MKRN3Q13064 507 aaKnown RBP19.84■□□□□ 0.77
CHRNA3-206ENST00000559658 STK38Q15208 465 aa19.84■□□□□ 0.77
CHRNA3-206ENST00000559658 RILPL1Q5EBL4 403 aa19.84■□□□□ 0.77
CHRNA3-206ENST00000559658 POTEEQ6S8J3 1075 aa19.84■□□□□ 0.77
CHRNA3-206ENST00000559658 PRPF38AQ8NAV1 312 aaKnown RBP19.84■□□□□ 0.77
CHRNA3-206ENST00000559658 GBA2Q9HCG7 927 aaPredicted RBP19.84■□□□□ 0.77
CHRNA3-206ENST00000559658 TMOD4Q9NZQ9 345 aa19.84■□□□□ 0.77
CHRNA3-206ENST00000559658 A0A0G2JMZ2 1700 aa19.83■□□□□ 0.77
CHRNA3-206ENST00000559658 A0A0G2JLL6 359 aaPredicted RBP19.83■□□□□ 0.76
CHRNA3-206ENST00000559658 GNA11P29992 359 aa19.83■□□□□ 0.76
CHRNA3-206ENST00000559658 CLK2P49760 499 aaKnown RBP19.83■□□□□ 0.76
CHRNA3-206ENST00000559658 MOGSQ13724 837 aa19.83■□□□□ 0.76
CHRNA3-206ENST00000559658 GALNT17Q6IS24 598 aa19.83■□□□□ 0.76
CHRNA3-206ENST00000559658 CHADLQ6NUI6 762 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms