RNA–Protein interactions for RNA: ENST00000558911.1

LRRC28-212, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-212ENST00000558911 RAB3GAP1Q15042 981 aa4.62□□□□□ -1.67
LRRC28-212ENST00000558911 OLFML2BQ68BL8 750 aa4.62□□□□□ -1.67
LRRC28-212ENST00000558911 DIEXFQ68CQ4 756 aaKnown RBP4.62□□□□□ -1.67
LRRC28-212ENST00000558911 TICAM2Q86XR7 235 aa4.62□□□□□ -1.67
LRRC28-212ENST00000558911 NLGN1Q8N2Q7 840 aa4.62□□□□□ -1.67
LRRC28-212ENST00000558911 USHBP1Q8N6Y0 703 aa4.62□□□□□ -1.67
LRRC28-212ENST00000558911 CCDC74BQ96LY2 380 aa4.62□□□□□ -1.67
LRRC28-212ENST00000558911 KIF2CQ99661 725 aa4.62□□□□□ -1.67
LRRC28-212ENST00000558911 GPR20Q99678 358 aa4.62□□□□□ -1.67
LRRC28-212ENST00000558911 PRDM16Q9HAZ2 1276 aa4.62□□□□□ -1.67
LRRC28-212ENST00000558911 METTL14Q9HCE5 456 aaKnown RBP4.62□□□□□ -1.67
LRRC28-212ENST00000558911 MRS2Q9HD23 443 aa4.62□□□□□ -1.67
LRRC28-212ENST00000558911 KLHL42Q9P2K6 505 aa4.62□□□□□ -1.67
LRRC28-212ENST00000558911 TCFL5Q9UL49 500 aa4.62□□□□□ -1.67
LRRC28-212ENST00000558911 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.62□□□□□ -1.67
LRRC28-212ENST00000558911 ZC3H12DA2A288 527 aaKnown RBP4.61□□□□□ -1.67
LRRC28-212ENST00000558911 GRIN3BO60391 1043 aa4.61□□□□□ -1.67
LRRC28-212ENST00000558911 BUB1BO60566 1050 aaPredicted RBP4.61□□□□□ -1.67
LRRC28-212ENST00000558911 MPOP05164 745 aa4.61□□□□□ -1.67
LRRC28-212ENST00000558911 SYPP08247 313 aa4.61□□□□□ -1.67
LRRC28-212ENST00000558911 PNLIPP16233 465 aa4.61□□□□□ -1.67
LRRC28-212ENST00000558911 IBSPP21815 317 aaPredicted RBP4.61□□□□□ -1.67
LRRC28-212ENST00000558911 PCBP3P57721 371 aaKnown RBP4.61□□□□□ -1.67
LRRC28-212ENST00000558911 RTP1P59025 263 aa4.61□□□□□ -1.67
LRRC28-212ENST00000558911 GNL2Q13823 731 aaKnown RBP4.61□□□□□ -1.67
LRRC28-212ENST00000558911 SPATS1Q496A3 300 aa4.61□□□□□ -1.67
LRRC28-212ENST00000558911 MEI1Q5TIA1 1274 aa4.61□□□□□ -1.67
LRRC28-212ENST00000558911 BNC2Q6ZN30 1099 aaPredicted RBP4.61□□□□□ -1.67
LRRC28-212ENST00000558911 RNF111Q6ZNA4 994 aa4.61□□□□□ -1.67
LRRC28-212ENST00000558911 LDHDQ86WU2 507 aa4.61□□□□□ -1.67
LRRC28-212ENST00000558911 ARMC5Q96C12 935 aa4.61□□□□□ -1.67
LRRC28-212ENST00000558911 TCTN2Q96GX1 697 aa4.61□□□□□ -1.67
LRRC28-212ENST00000558911 MAP6Q96JE9 813 aa4.61□□□□□ -1.67
LRRC28-212ENST00000558911 HHIPL1Q96JK4 782 aa4.61□□□□□ -1.67
LRRC28-212ENST00000558911 TEPSINQ96N21 525 aa4.61□□□□□ -1.67
LRRC28-212ENST00000558911 DUSP9Q99956 384 aaKnown RBP4.61□□□□□ -1.67
LRRC28-212ENST00000558911 ASPNQ9BXN1 380 aa4.61□□□□□ -1.67
LRRC28-212ENST00000558911 MYH16Q9H6N6 1097 aa4.61□□□□□ -1.67
LRRC28-212ENST00000558911 CRTAC1Q9NQ79 661 aa4.61□□□□□ -1.67
LRRC28-212ENST00000558911 MEIS1O00470 390 aa4.6□□□□□ -1.67
LRRC28-212ENST00000558911 PRICKLE3O43900 615 aaPredicted RBP4.6□□□□□ -1.67
LRRC28-212ENST00000558911 SORBS3O60504 671 aa4.6□□□□□ -1.67
LRRC28-212ENST00000558911 CILPO75339 1184 aa4.6□□□□□ -1.67
LRRC28-212ENST00000558911 CLSTN1O94985 981 aa4.6□□□□□ -1.67
LRRC28-212ENST00000558911 PARNO95453 639 aaKnown RBP4.6□□□□□ -1.67
LRRC28-212ENST00000558911 ZNF76P36508 570 aa4.6□□□□□ -1.67
LRRC28-212ENST00000558911 KIR2DL1P43626 348 aaPredicted RBP4.6□□□□□ -1.67
LRRC28-212ENST00000558911 KIR2DL2P43627 348 aaPredicted RBP4.6□□□□□ -1.67
LRRC28-212ENST00000558911 LIMS1P48059 325 aa4.6□□□□□ -1.67
LRRC28-212ENST00000558911 KCNC1P48547 511 aa4.6□□□□□ -1.67
LRRC28-212ENST00000558911 ANAPC15P60006 121 aa4.6□□□□□ -1.67
LRRC28-212ENST00000558911 ARID5AQ03989 594 aa4.6□□□□□ -1.67
LRRC28-212ENST00000558911 TMC3Q7Z5M5 1100 aa4.6□□□□□ -1.67
LRRC28-212ENST00000558911 JAZF1Q86VZ6 243 aa4.6□□□□□ -1.67
LRRC28-212ENST00000558911 IGDCC3Q8IVU1 814 aa4.6□□□□□ -1.67
LRRC28-212ENST00000558911 LINC01356Q8N9X3 169 aa4.6□□□□□ -1.67
LRRC28-212ENST00000558911 GMLQ99445 158 aa4.6□□□□□ -1.67
LRRC28-212ENST00000558911 METTL5Q9NRN9 209 aaKnown RBP4.6□□□□□ -1.67
LRRC28-212ENST00000558911 KLHL14Q9P2G3 628 aa4.6□□□□□ -1.67
LRRC28-212ENST00000558911 REV1Q9UBZ9 1251 aa4.6□□□□□ -1.67
LRRC28-212ENST00000558911 VTI1BQ9UEU0 232 aa4.6□□□□□ -1.67
LRRC28-212ENST00000558911 HRKO00198 91 aa4.59□□□□□ -1.67
LRRC28-212ENST00000558911 IRS4O14654 1257 aaPredicted RBP4.59□□□□□ -1.67
LRRC28-212ENST00000558911 MAP4K4O95819 1239 aaPredicted RBP4.59□□□□□ -1.67
LRRC28-212ENST00000558911 GNA15P30679 374 aa4.59□□□□□ -1.67
LRRC28-212ENST00000558911 ARL4AP40617 200 aa4.59□□□□□ -1.67
LRRC28-212ENST00000558911 PSMD2Q13200 908 aa4.59□□□□□ -1.67
LRRC28-212ENST00000558911 BMS1Q14692 1282 aaKnown RBP4.59□□□□□ -1.67
LRRC28-212ENST00000558911 SOGA3Q5TF21 947 aa4.59□□□□□ -1.67
LRRC28-212ENST00000558911 TNS2Q63HR2 1409 aa4.59□□□□□ -1.67
LRRC28-212ENST00000558911 TMC4Q7Z404 712 aa4.59□□□□□ -1.67
LRRC28-212ENST00000558911 FERMT3Q86UX7 667 aa4.59□□□□□ -1.67
LRRC28-212ENST00000558911 LSRQ86X29 649 aaPredicted RBP4.59□□□□□ -1.67
LRRC28-212ENST00000558911 SLFN12Q8IYM2 578 aa4.59□□□□□ -1.67
LRRC28-212ENST00000558911 ADGRG2Q8IZP9 1017 aa4.59□□□□□ -1.67
LRRC28-212ENST00000558911 SNX27Q96L92 541 aa4.59□□□□□ -1.67
LRRC28-212ENST00000558911 FRMD6Q96NE9 622 aa4.59□□□□□ -1.67
LRRC28-212ENST00000558911 HDAC8Q9BY41 377 aa4.59□□□□□ -1.67
LRRC28-212ENST00000558911 OSBPL2Q9H1P3 480 aa4.59□□□□□ -1.67
LRRC28-212ENST00000558911 LUC7LQ9NQ29 371 aaKnown RBP4.59□□□□□ -1.67
LRRC28-212ENST00000558911 MINPP1Q9UNW1 487 aa4.59□□□□□ -1.67
LRRC28-212ENST00000558911 TAF6LQ9Y6J9 622 aa4.59□□□□□ -1.67
LRRC28-212ENST00000558911 CEP164Q9UPV0 1460 aa4.58□□□□□ -1.68
LRRC28-212ENST00000558911 TMEM82A0PJX8 343 aa4.58□□□□□ -1.68
LRRC28-212ENST00000558911 ABLIM1O14639 778 aa4.58□□□□□ -1.68
LRRC28-212ENST00000558911 PRPF40AO75400 957 aaKnown RBP4.58□□□□□ -1.68
LRRC28-212ENST00000558911 PRKCAP17252 672 aa4.58□□□□□ -1.68
LRRC28-212ENST00000558911 YBX1P67809 324 aaKnown RBP4.58□□□□□ -1.68
LRRC28-212ENST00000558911 DAB2P98082 770 aa4.58□□□□□ -1.68
LRRC28-212ENST00000558911 SNW1Q13573 536 aaKnown RBP4.58□□□□□ -1.68
LRRC28-212ENST00000558911 HSF5Q4G112 596 aaPredicted RBP4.58□□□□□ -1.68
LRRC28-212ENST00000558911 TMEM201Q5SNT2 666 aa4.58□□□□□ -1.68
LRRC28-212ENST00000558911 UBXN11Q5T124 520 aa4.58□□□□□ -1.68
LRRC28-212ENST00000558911 CCDC181Q5TID7 509 aa4.58□□□□□ -1.68
LRRC28-212ENST00000558911 FRMD5Q7Z6J6 570 aa4.58□□□□□ -1.68
LRRC28-212ENST00000558911 EXOC8Q8IYI6 725 aa4.58□□□□□ -1.68
LRRC28-212ENST00000558911 TP53I13Q8NBR0 393 aaPredicted RBP4.58□□□□□ -1.68
LRRC28-212ENST00000558911 SYTL5Q8TDW5 730 aaPredicted RBP4.58□□□□□ -1.68
LRRC28-212ENST00000558911 USP40Q9NVE5 1235 aa4.58□□□□□ -1.68
LRRC28-212ENST00000558911 INPP5FQ9Y2H2 1132 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms