RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 CCDC114Q96M63 670 aa5.66□□□□□ -1.5
HMG20A-204ENST00000558288 ZKSCAN3Q9BRR0 538 aa5.66□□□□□ -1.5
HMG20A-204ENST00000558288 LRRC1Q9BTT6 524 aa5.66□□□□□ -1.5
HMG20A-204ENST00000558288 INCENPQ9NQS7 918 aa5.66□□□□□ -1.5
HMG20A-204ENST00000558288 ODF2LQ9ULJ1 636 aa5.66□□□□□ -1.5
HMG20A-204ENST00000558288 ZBTB1Q9Y2K1 713 aa5.66□□□□□ -1.5
HMG20A-204ENST00000558288 REXO2Q9Y3B8 237 aaKnown RBP5.66□□□□□ -1.5
HMG20A-204ENST00000558288 ZC3H4Q9UPT8 1303 aaKnown RBP5.66□□□□□ -1.5
HMG20A-204ENST00000558288 TTC26A0AVF1 554 aa5.65□□□□□ -1.5
HMG20A-204ENST00000558288 ERVV-2B6SEH9 535 aa5.65□□□□□ -1.5
HMG20A-204ENST00000558288 PDE2AO00408 941 aaPredicted RBP5.65□□□□□ -1.5
HMG20A-204ENST00000558288 IDH1O75874 414 aaKnown RBP5.65□□□□□ -1.5
HMG20A-204ENST00000558288 SERPINB2P05120 415 aa5.65□□□□□ -1.5
HMG20A-204ENST00000558288 ZFYP08048 801 aaPredicted RBP5.65□□□□□ -1.5
HMG20A-204ENST00000558288 ADORA1P30542 326 aa5.65□□□□□ -1.5
HMG20A-204ENST00000558288 CXCR5P32302 372 aa5.65□□□□□ -1.5
HMG20A-204ENST00000558288 ELF1P32519 619 aa5.65□□□□□ -1.5
HMG20A-204ENST00000558288 ZAP70P43403 619 aa5.65□□□□□ -1.5
HMG20A-204ENST00000558288 DNA2P51530 1060 aa5.65□□□□□ -1.5
HMG20A-204ENST00000558288 GUCY1A3Q02108 690 aa5.65□□□□□ -1.5
HMG20A-204ENST00000558288 CYP27A1Q02318 531 aa5.65□□□□□ -1.5
HMG20A-204ENST00000558288 SPAG1Q07617 926 aa5.65□□□□□ -1.5
HMG20A-204ENST00000558288 PAK1Q13153 545 aa5.65□□□□□ -1.5
HMG20A-204ENST00000558288 NNTQ13423 1086 aa5.65□□□□□ -1.5
HMG20A-204ENST00000558288 CCDC96Q2M329 555 aa5.65□□□□□ -1.5
HMG20A-204ENST00000558288 ATG9AQ7Z3C6 839 aa5.65□□□□□ -1.5
HMG20A-204ENST00000558288 GPIHBP1Q8IV16 184 aa5.65□□□□□ -1.5
HMG20A-204ENST00000558288 HDAC7Q8WUI4 952 aa5.65□□□□□ -1.5
HMG20A-204ENST00000558288 SYMPKQ92797 1274 aaKnown RBP5.65□□□□□ -1.5
HMG20A-204ENST00000558288 SETDB2Q96T68 719 aa5.65□□□□□ -1.5
HMG20A-204ENST00000558288 PUS3Q9BZE2 481 aaKnown RBP5.65□□□□□ -1.5
HMG20A-204ENST00000558288 VEZTQ9HBM0 779 aa5.65□□□□□ -1.5
HMG20A-204ENST00000558288 VPS54Q9P1Q0 977 aa5.65□□□□□ -1.5
HMG20A-204ENST00000558288 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.65□□□□□ -1.5
HMG20A-204ENST00000558288 SRPRBQ9Y5M8 271 aaKnown RBP5.65□□□□□ -1.5
HMG20A-204ENST00000558288 GJA3Q9Y6H8 435 aa5.65□□□□□ -1.5
HMG20A-204ENST00000558288 ITIH6Q6UXX5 1313 aa5.65□□□□□ -1.5
HMG20A-204ENST00000558288 TOPAZ1Q8N9V7 1692 aa5.65□□□□□ -1.5
HMG20A-204ENST00000558288 BTAF1O14981 1849 aa5.65□□□□□ -1.5
HMG20A-204ENST00000558288 MRC1P22897 1456 aa5.65□□□□□ -1.5
HMG20A-204ENST00000558288 EYA2O00167 538 aa5.65□□□□□ -1.51
HMG20A-204ENST00000558288 FOXP2O15409 715 aa5.65□□□□□ -1.51
HMG20A-204ENST00000558288 KRT14P02533 472 aa5.65□□□□□ -1.51
HMG20A-204ENST00000558288 TRIM21P19474 475 aaKnown RBP5.65□□□□□ -1.51
HMG20A-204ENST00000558288 HPDP32754 393 aaPredicted RBP5.65□□□□□ -1.51
HMG20A-204ENST00000558288 CYLC1P35663 651 aaPredicted RBP5.65□□□□□ -1.51
HMG20A-204ENST00000558288 NAP1L1P55209 391 aaKnown RBP5.65□□□□□ -1.51
HMG20A-204ENST00000558288 TGFB2P61812 414 aa5.65□□□□□ -1.51
HMG20A-204ENST00000558288 HERVK_113P62684 666 aa5.65□□□□□ -1.51
HMG20A-204ENST00000558288 RABL6Q3YEC7 729 aaPredicted RBP5.65□□□□□ -1.51
HMG20A-204ENST00000558288 ELOA2Q8IYF1 753 aaPredicted RBP5.65□□□□□ -1.51
HMG20A-204ENST00000558288 TTLL6Q8N841 843 aa5.65□□□□□ -1.51
HMG20A-204ENST00000558288 RASSF8Q8NHQ8 419 aa5.65□□□□□ -1.51
HMG20A-204ENST00000558288 OXER1Q8TDS5 423 aa5.65□□□□□ -1.51
HMG20A-204ENST00000558288 NELFBQ8WX92 580 aa5.65□□□□□ -1.51
HMG20A-204ENST00000558288 IFT81Q8WYA0 676 aa5.65□□□□□ -1.51
HMG20A-204ENST00000558288 ZKSCAN4Q969J2 545 aaPredicted RBP5.65□□□□□ -1.51
HMG20A-204ENST00000558288 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.65□□□□□ -1.51
HMG20A-204ENST00000558288 SLC24A3Q9HC58 644 aa5.65□□□□□ -1.51
HMG20A-204ENST00000558288 KLC4Q9NSK0 619 aa5.65□□□□□ -1.51
HMG20A-204ENST00000558288 DUSP10Q9Y6W6 482 aa5.65□□□□□ -1.51
HMG20A-204ENST00000558288 A0A087X0B3 334 aa5.65□□□□□ -1.51
HMG20A-204ENST00000558288 GOLGA6L7A0A1B0GV03 622 aa5.65□□□□□ -1.51
HMG20A-204ENST00000558288 TRIM75PA6NK02 468 aa5.65□□□□□ -1.51
HMG20A-204ENST00000558288 PPP1R3GB7ZBB8 358 aa5.65□□□□□ -1.51
HMG20A-204ENST00000558288 E7EVH7 732 aa5.65□□□□□ -1.51
HMG20A-204ENST00000558288 SEMA3EO15041 775 aa5.65□□□□□ -1.51
HMG20A-204ENST00000558288 SEC24CP53992 1094 aa5.65□□□□□ -1.51
HMG20A-204ENST00000558288 CLNS1AP54105 237 aaKnown RBP5.65□□□□□ -1.51
HMG20A-204ENST00000558288 APBA1Q02410 837 aa5.65□□□□□ -1.51
HMG20A-204ENST00000558288 KIF5AQ12840 1032 aa5.65□□□□□ -1.51
HMG20A-204ENST00000558288 DPYDQ12882 1025 aa5.65□□□□□ -1.51
HMG20A-204ENST00000558288 SCARF1Q14162 830 aa5.65□□□□□ -1.51
HMG20A-204ENST00000558288 E2F5Q15329 346 aa5.65□□□□□ -1.51
HMG20A-204ENST00000558288 SPA17Q15506 151 aa5.65□□□□□ -1.51
HMG20A-204ENST00000558288 CCDC40Q4G0X9 1142 aa5.65□□□□□ -1.51
HMG20A-204ENST00000558288 TTMPQ5BVD1 217 aa5.65□□□□□ -1.51
HMG20A-204ENST00000558288 TCP11X2Q5H9J9 407 aa5.65□□□□□ -1.51
HMG20A-204ENST00000558288 CFAP58Q5T655 872 aa5.65□□□□□ -1.51
HMG20A-204ENST00000558288 LRCH2Q5VUJ6 765 aa5.65□□□□□ -1.51
HMG20A-204ENST00000558288 PAPD7Q5XG87 772 aaKnown RBP5.65□□□□□ -1.51
HMG20A-204ENST00000558288 CCDC121Q6ZUS5 278 aa5.65□□□□□ -1.51
HMG20A-204ENST00000558288 NBPF5PQ86XG9 351 aaPredicted RBP5.65□□□□□ -1.51
HMG20A-204ENST00000558288 IQCA1Q86XH1 822 aa5.65□□□□□ -1.51
HMG20A-204ENST00000558288 NKX2-3Q8TAU0 364 aa5.65□□□□□ -1.51
HMG20A-204ENST00000558288 SMCR8Q8TEV9 937 aaPredicted RBP5.65□□□□□ -1.51
HMG20A-204ENST00000558288 AENQ8WTP8 325 aaKnown RBP5.65□□□□□ -1.51
HMG20A-204ENST00000558288 EEF2KMTQ96G04 330 aa5.65□□□□□ -1.51
HMG20A-204ENST00000558288 CCDC43Q96MW1 224 aaKnown RBP5.65□□□□□ -1.51
HMG20A-204ENST00000558288 GSDMAQ96QA5 445 aa5.65□□□□□ -1.51
HMG20A-204ENST00000558288 SMARCAL1Q9NZC9 954 aa5.65□□□□□ -1.51
HMG20A-204ENST00000558288 MAGEC2Q9UBF1 373 aaPredicted RBP5.65□□□□□ -1.51
HMG20A-204ENST00000558288 DMGDHQ9UI17 866 aaKnown RBP5.65□□□□□ -1.51
HMG20A-204ENST00000558288 KDM3BQ7LBC6 1761 aa5.64□□□□□ -1.51
HMG20A-204ENST00000558288 FMNL1O95466 1100 aaPredicted RBP5.64□□□□□ -1.51
HMG20A-204ENST00000558288 EPHB4P54760 987 aa5.64□□□□□ -1.51
HMG20A-204ENST00000558288 RTN1Q16799 776 aa5.64□□□□□ -1.51
HMG20A-204ENST00000558288 MAATS1Q7Z4T9 603 aa5.64□□□□□ -1.51
HMG20A-204ENST00000558288 ZNF579Q8NAF0 562 aaKnown RBP5.64□□□□□ -1.51
HMG20A-204ENST00000558288 TSEN2Q8NCE0 465 aaKnown RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms