RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 Q3C1V9 767 aa24.67■■□□□ 1.54
CASC4-204ENST00000557945 ZSCAN31Q96LW9 406 aaPredicted RBP24.67■■□□□ 1.54
CASC4-204ENST00000557945 SPATC1LQ9H0A9 340 aa24.67■■□□□ 1.54
CASC4-204ENST00000557945 PCNTO95613 3336 aa24.67■■□□□ 1.54
CASC4-204ENST00000557945 ECM2O94769 699 aaPredicted RBP24.67■■□□□ 1.54
CASC4-204ENST00000557945 CD2BP2O95400 341 aaKnown RBP24.67■■□□□ 1.54
CASC4-204ENST00000557945 STAT3P40763 770 aa24.67■■□□□ 1.54
CASC4-204ENST00000557945 MCM2P49736 904 aa24.67■■□□□ 1.54
CASC4-204ENST00000557945 CCNA1P78396 465 aa24.67■■□□□ 1.54
CASC4-204ENST00000557945 SCRN1Q12765 414 aa24.67■■□□□ 1.54
CASC4-204ENST00000557945 CCAR1Q8IX12 1150 aaKnown RBP24.67■■□□□ 1.54
CASC4-204ENST00000557945 RRP36Q96EU6 259 aaKnown RBP24.67■■□□□ 1.54
CASC4-204ENST00000557945 ZNF214Q9UL59 606 aaPredicted RBP24.67■■□□□ 1.54
CASC4-204ENST00000557945 SP3Q02447 781 aa24.66■■□□□ 1.54
CASC4-204ENST00000557945 QRICH1Q2TAL8 776 aa24.66■■□□□ 1.54
CASC4-204ENST00000557945 SNRNP48Q6IEG0 339 aaKnown RBP24.66■■□□□ 1.54
CASC4-204ENST00000557945 CPLX2Q6PUV4 134 aaKnown RBP24.66■■□□□ 1.54
CASC4-204ENST00000557945 AGBL1Q96MI9 1066 aa24.66■■□□□ 1.54
CASC4-204ENST00000557945 PIGSQ96S52 555 aa24.66■■□□□ 1.54
CASC4-204ENST00000557945 TEX13BQ9BXU2 312 aa24.66■■□□□ 1.54
CASC4-204ENST00000557945 CCPG1Q9ULG6 757 aa24.66■■□□□ 1.54
CASC4-204ENST00000557945 FOXN1O15353 648 aa24.65■■□□□ 1.54
CASC4-204ENST00000557945 OAZ1P54368 228 aa24.65■■□□□ 1.54
CASC4-204ENST00000557945 GTF3C6Q969F1 213 aa24.65■■□□□ 1.54
CASC4-204ENST00000557945 MOV10L1Q9BXT6 1211 aaKnown RBP24.65■■□□□ 1.54
CASC4-204ENST00000557945 SH2B1Q9NRF2 756 aaPredicted RBP24.65■■□□□ 1.54
CASC4-204ENST00000557945 SEC63Q9UGP8 760 aaKnown RBP24.65■■□□□ 1.54
CASC4-204ENST00000557945 A0A0G2JMZ2 1700 aa24.65■■□□□ 1.54
CASC4-204ENST00000557945 BAZ2BQ9UIF8 2168 aaKnown RBP24.65■■□□□ 1.54
CASC4-204ENST00000557945 ZNF536O15090 1300 aa24.64■■□□□ 1.54
CASC4-204ENST00000557945 CNTNAP5Q8WYK1 1306 aa24.64■■□□□ 1.54
CASC4-204ENST00000557945 hCG_1642624A0A1W2PR95 340 aa24.64■■□□□ 1.53
CASC4-204ENST00000557945 ATP2A1O14983 1001 aa24.64■■□□□ 1.53
CASC4-204ENST00000557945 ZBTB5O15062 677 aa24.64■■□□□ 1.53
CASC4-204ENST00000557945 PPFIA3O75145 1194 aa24.64■■□□□ 1.53
CASC4-204ENST00000557945 ICAM1P05362 532 aa24.64■■□□□ 1.53
CASC4-204ENST00000557945 WDR78Q5VTH9 848 aa24.64■■□□□ 1.53
CASC4-204ENST00000557945 MTMR8Q96EF0 704 aa24.64■■□□□ 1.53
CASC4-204ENST00000557945 CWC22Q9HCG8 908 aaKnown RBP24.64■■□□□ 1.53
CASC4-204ENST00000557945 V9GY48 417 aaPredicted RBP24.64■■□□□ 1.53
CASC4-204ENST00000557945 COL11A1P12107 1806 aaPredicted RBP24.64■■□□□ 1.53
CASC4-204ENST00000557945 PNMA6FA0A0J9YX94 578 aa24.63■■□□□ 1.53
CASC4-204ENST00000557945 FKTNO75072 461 aa24.63■■□□□ 1.53
CASC4-204ENST00000557945 TAL1P17542 331 aaPredicted RBP24.63■■□□□ 1.53
CASC4-204ENST00000557945 FUT2Q10981 343 aa24.63■■□□□ 1.53
CASC4-204ENST00000557945 NCAPG2Q86XI2 1143 aa24.63■■□□□ 1.53
CASC4-204ENST00000557945 FBXO11Q86XK2 927 aa24.63■■□□□ 1.53
CASC4-204ENST00000557945 RIOX2Q8IUF8 465 aa24.63■■□□□ 1.53
CASC4-204ENST00000557945 CCDC83Q8IWF9 413 aa24.63■■□□□ 1.53
CASC4-204ENST00000557945 ZNF296Q8WUU4 475 aaPredicted RBP24.63■■□□□ 1.53
CASC4-204ENST00000557945 PHKBQ93100 1093 aa24.63■■□□□ 1.53
CASC4-204ENST00000557945 CDKL5O76039 1030 aa24.62■■□□□ 1.53
CASC4-204ENST00000557945 SLC25A27O95847 323 aa24.62■■□□□ 1.53
CASC4-204ENST00000557945 ALAS1P13196 640 aa24.62■■□□□ 1.53
CASC4-204ENST00000557945 IFNAR1P17181 557 aa24.62■■□□□ 1.53
CASC4-204ENST00000557945 LACTBP83111 547 aaPredicted RBP24.62■■□□□ 1.53
CASC4-204ENST00000557945 AKAP17AQ02040 695 aaKnown RBP24.62■■□□□ 1.53
CASC4-204ENST00000557945 KIF22Q14807 665 aa24.62■■□□□ 1.53
CASC4-204ENST00000557945 NTRK3Q16288 839 aa24.62■■□□□ 1.53
CASC4-204ENST00000557945 USH1GQ495M9 461 aa24.62■■□□□ 1.53
CASC4-204ENST00000557945 NOM1Q5C9Z4 860 aaKnown RBP24.62■■□□□ 1.53
CASC4-204ENST00000557945 SLC26A6Q9BXS9 759 aa24.62■■□□□ 1.53
CASC4-204ENST00000557945 PORCNQ9H237 461 aa24.62■■□□□ 1.53
CASC4-204ENST00000557945 EFCC1Q9HA90 598 aa24.62■■□□□ 1.53
CASC4-204ENST00000557945 HOMER2Q9NSB8 354 aa24.62■■□□□ 1.53
CASC4-204ENST00000557945 PNMA2Q9UL42 364 aa24.62■■□□□ 1.53
CASC4-204ENST00000557945 HSPA8P11142 646 aaKnown RBP24.61■■□□□ 1.53
CASC4-204ENST00000557945 ERCC3P19447 782 aa24.61■■□□□ 1.53
CASC4-204ENST00000557945 CTCFP49711 727 aaPredicted RBP24.61■■□□□ 1.53
CASC4-204ENST00000557945 TMX3Q96JJ7 454 aa24.61■■□□□ 1.53
CASC4-204ENST00000557945 AMNQ9BXJ7 453 aa24.61■■□□□ 1.53
CASC4-204ENST00000557945 RIPK3Q9Y572 518 aa24.61■■□□□ 1.53
CASC4-204ENST00000557945 MAPK4P31152 587 aa24.6■■□□□ 1.53
CASC4-204ENST00000557945 COPB2P35606 906 aa24.6■■□□□ 1.53
CASC4-204ENST00000557945 SSRP1Q08945 709 aaKnown RBP24.6■■□□□ 1.53
CASC4-204ENST00000557945 TRIM22Q8IYM9 498 aa24.6■■□□□ 1.53
CASC4-204ENST00000557945 SHCBP1Q8NEM2 672 aa24.6■■□□□ 1.53
CASC4-204ENST00000557945 CD99L2Q8TCZ2 262 aa24.6■■□□□ 1.53
CASC4-204ENST00000557945 MROH8Q9H579 483 aa24.6■■□□□ 1.53
CASC4-204ENST00000557945 PPP1R11O60927 126 aaPredicted RBP24.59■■□□□ 1.53
CASC4-204ENST00000557945 DTNBO60941 627 aa24.59■■□□□ 1.53
CASC4-204ENST00000557945 FMNL1O95466 1100 aaPredicted RBP24.59■■□□□ 1.53
CASC4-204ENST00000557945 FCGRTP55899 365 aa24.59■■□□□ 1.53
CASC4-204ENST00000557945 TKFCQ3LXA3 575 aa24.59■■□□□ 1.53
CASC4-204ENST00000557945 ERO1AQ96HE7 468 aa24.59■■□□□ 1.53
CASC4-204ENST00000557945 TRERF1Q96PN7 1200 aa24.59■■□□□ 1.53
CASC4-204ENST00000557945 ARHGAP39Q9C0H5 1083 aa24.59■■□□□ 1.53
CASC4-204ENST00000557945 RNF146Q9NTX7 359 aa24.59■■□□□ 1.53
CASC4-204ENST00000557945 PCDHA1Q9Y5I3 950 aa24.59■■□□□ 1.53
CASC4-204ENST00000557945 PRPF3O43395 683 aaKnown RBP24.58■■□□□ 1.53
CASC4-204ENST00000557945 PSMC4P43686 418 aa24.58■■□□□ 1.53
CASC4-204ENST00000557945 LBX1P52954 281 aa24.58■■□□□ 1.53
CASC4-204ENST00000557945 ST3GAL1Q11201 340 aa24.58■■□□□ 1.53
CASC4-204ENST00000557945 TRAF1Q13077 416 aa24.58■■□□□ 1.53
CASC4-204ENST00000557945 HEATR3Q7Z4Q2 680 aa24.58■■□□□ 1.53
CASC4-204ENST00000557945 RNF26Q9BY78 433 aaPredicted RBP24.58■■□□□ 1.53
CASC4-204ENST00000557945 RBM27Q9P2N5 1060 aaKnown RBP24.58■■□□□ 1.53
CASC4-204ENST00000557945 ABCB11O95342 1321 aa24.57■■□□□ 1.52
CASC4-204ENST00000557945 TNPO2O14787 897 aaKnown RBP24.57■■□□□ 1.52
CASC4-204ENST00000557945 CTDNEP1O95476 244 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms