RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 LZTS2Q9BRK4 669 aa17.74■□□□□ 0.43
NEDD1-213ENST00000557644 CFHR5Q9BXR6 569 aa17.74■□□□□ 0.43
NEDD1-213ENST00000557644 SAGE1Q9NXZ1 904 aa17.74■□□□□ 0.43
NEDD1-213ENST00000557644 RABGAP1Q9Y3P9 1069 aa17.74■□□□□ 0.43
NEDD1-213ENST00000557644 SLC4A3P48751 1232 aa17.73■□□□□ 0.43
NEDD1-213ENST00000557644 ERVK-9P63128 1117 aa17.73■□□□□ 0.43
NEDD1-213ENST00000557644 ERVK-24P63145 666 aa17.73■□□□□ 0.43
NEDD1-213ENST00000557644 QRICH1Q2TAL8 776 aa17.73■□□□□ 0.43
NEDD1-213ENST00000557644 CCDC83Q8IWF9 413 aa17.73■□□□□ 0.43
NEDD1-213ENST00000557644 MB21D1Q8N884 522 aa17.73■□□□□ 0.43
NEDD1-213ENST00000557644 MTMR8Q96EF0 704 aa17.73■□□□□ 0.43
NEDD1-213ENST00000557644 AGBL1Q96MI9 1066 aa17.73■□□□□ 0.43
NEDD1-213ENST00000557644 CTDP1Q9Y5B0 961 aaPredicted RBP17.73■□□□□ 0.43
NEDD1-213ENST00000557644 CPLX1O14810 134 aa17.73■□□□□ 0.43
NEDD1-213ENST00000557644 CTDNEP1O95476 244 aa17.73■□□□□ 0.43
NEDD1-213ENST00000557644 IL27Q8NEV9 243 aa17.73■□□□□ 0.43
NEDD1-213ENST00000557644 GTF3C2Q8WUA4 911 aaPredicted RBP17.73■□□□□ 0.43
NEDD1-213ENST00000557644 ZSCAN31Q96LW9 406 aaPredicted RBP17.73■□□□□ 0.43
NEDD1-213ENST00000557644 PPP1R11O60927 126 aaPredicted RBP17.72■□□□□ 0.43
NEDD1-213ENST00000557644 MCM2P49736 904 aa17.72■□□□□ 0.43
NEDD1-213ENST00000557644 FAM110CQ1W6H9 321 aa17.72■□□□□ 0.43
NEDD1-213ENST00000557644 GPRC5AQ8NFJ5 357 aa17.72■□□□□ 0.43
NEDD1-213ENST00000557644 SPATC1LQ9H0A9 340 aa17.72■□□□□ 0.43
NEDD1-213ENST00000557644 MORF4L1Q9UBU8 362 aa17.72■□□□□ 0.43
NEDD1-213ENST00000557644 RIPK3Q9Y572 518 aa17.72■□□□□ 0.43
NEDD1-213ENST00000557644 V9GY48 417 aaPredicted RBP17.72■□□□□ 0.43
NEDD1-213ENST00000557644 A0A0G2JMZ2 1700 aa17.72■□□□□ 0.43
NEDD1-213ENST00000557644 COL11A1P12107 1806 aaPredicted RBP17.72■□□□□ 0.43
NEDD1-213ENST00000557644 SMARCA1P28370 1054 aa17.72■□□□□ 0.43
NEDD1-213ENST00000557644 SH2B1Q9NRF2 756 aaPredicted RBP17.72■□□□□ 0.43
NEDD1-213ENST00000557644 ZBTB5O15062 677 aa17.71■□□□□ 0.43
NEDD1-213ENST00000557644 IFNAR1P17181 557 aa17.71■□□□□ 0.43
NEDD1-213ENST00000557644 STAT3P40763 770 aa17.71■□□□□ 0.43
NEDD1-213ENST00000557644 SNRNP48Q6IEG0 339 aaKnown RBP17.71■□□□□ 0.43
NEDD1-213ENST00000557644 RRP36Q96EU6 259 aaKnown RBP17.71■□□□□ 0.43
NEDD1-213ENST00000557644 MOV10L1Q9BXT6 1211 aaKnown RBP17.71■□□□□ 0.43
NEDD1-213ENST00000557644 PORCNQ9H237 461 aa17.71■□□□□ 0.43
NEDD1-213ENST00000557644 FDX1P10109 184 aa17.71■□□□□ 0.42
NEDD1-213ENST00000557644 USH1GQ495M9 461 aa17.71■□□□□ 0.42
NEDD1-213ENST00000557644 SLC26A6Q9BXS9 759 aa17.71■□□□□ 0.42
NEDD1-213ENST00000557644 TEX13BQ9BXU2 312 aa17.71■□□□□ 0.42
NEDD1-213ENST00000557644 HOMER2Q9NSB8 354 aa17.71■□□□□ 0.42
NEDD1-213ENST00000557644 CCPG1Q9ULG6 757 aa17.71■□□□□ 0.42
NEDD1-213ENST00000557644 GPR25O00155 361 aa17.7■□□□□ 0.42
NEDD1-213ENST00000557644 ATP2A1O14983 1001 aa17.7■□□□□ 0.42
NEDD1-213ENST00000557644 ICAM1P05362 532 aa17.7■□□□□ 0.42
NEDD1-213ENST00000557644 SNX21Q969T3 373 aa17.7■□□□□ 0.42
NEDD1-213ENST00000557644 EFCC1Q9HA90 598 aa17.7■□□□□ 0.42
NEDD1-213ENST00000557644 PNMA6FA0A0J9YX94 578 aa17.69■□□□□ 0.42
NEDD1-213ENST00000557644 JAK2O60674 1132 aa17.69■□□□□ 0.42
NEDD1-213ENST00000557644 CAP1Q01518 475 aa17.69■□□□□ 0.42
NEDD1-213ENST00000557644 SMCHD1A6NHR9 2005 aa17.69■□□□□ 0.42
NEDD1-213ENST00000557644 HSPA1AP0DMV8 641 aaKnown RBP17.69■□□□□ 0.42
NEDD1-213ENST00000557644 HSPA1BP0DMV9 641 aaKnown RBP17.69■□□□□ 0.42
NEDD1-213ENST00000557644 OAZ1P54368 228 aa17.69■□□□□ 0.42
NEDD1-213ENST00000557644 NSUN7Q8NE18 718 aaKnown RBP17.69■□□□□ 0.42
NEDD1-213ENST00000557644 SEC63Q9UGP8 760 aaKnown RBP17.69■□□□□ 0.42
NEDD1-213ENST00000557644 FOXN1O15353 648 aa17.68■□□□□ 0.42
NEDD1-213ENST00000557644 ALAS1P13196 640 aa17.68■□□□□ 0.42
NEDD1-213ENST00000557644 ERCC3P19447 782 aa17.68■□□□□ 0.42
NEDD1-213ENST00000557644 CTGFP29279 349 aa17.68■□□□□ 0.42
NEDD1-213ENST00000557644 CPLX2Q6PUV4 134 aaKnown RBP17.68■□□□□ 0.42
NEDD1-213ENST00000557644 NCAPG2Q86XI2 1143 aa17.68■□□□□ 0.42
NEDD1-213ENST00000557644 FBXO11Q86XK2 927 aa17.68■□□□□ 0.42
NEDD1-213ENST00000557644 RIOX2Q8IUF8 465 aa17.68■□□□□ 0.42
NEDD1-213ENST00000557644 GPKOWQ92917 476 aaPredicted RBP eCLIP17.68■□□□□ 0.42
NEDD1-213ENST00000557644 COA7Q96BR5 231 aa17.68■□□□□ 0.42
NEDD1-213ENST00000557644 ARHGAP39Q9C0H5 1083 aa17.68■□□□□ 0.42
NEDD1-213ENST00000557644 K7ELQ4 463 aaPredicted RBP17.68■□□□□ 0.42
NEDD1-213ENST00000557644 FMNL1O95466 1100 aaPredicted RBP17.68■□□□□ 0.42
NEDD1-213ENST00000557644 SP3Q02447 781 aa17.68■□□□□ 0.42
NEDD1-213ENST00000557644 SSRP1Q08945 709 aaKnown RBP17.68■□□□□ 0.42
NEDD1-213ENST00000557644 PKN1Q16512 942 aa17.68■□□□□ 0.42
NEDD1-213ENST00000557644 ZNF296Q8WUU4 475 aaPredicted RBP17.68■□□□□ 0.42
NEDD1-213ENST00000557644 DDX11Q96FC9 970 aa17.68■□□□□ 0.42
NEDD1-213ENST00000557644 RNF26Q9BY78 433 aaPredicted RBP17.68■□□□□ 0.42
NEDD1-213ENST00000557644 PTPDC1A2A3K4 754 aa17.67■□□□□ 0.42
NEDD1-213ENST00000557644 PRPF3O43395 683 aaKnown RBP17.67■□□□□ 0.42
NEDD1-213ENST00000557644 WDR78Q5VTH9 848 aa17.67■□□□□ 0.42
NEDD1-213ENST00000557644 AMNQ9BXJ7 453 aa17.67■□□□□ 0.42
NEDD1-213ENST00000557644 PCDHA1Q9Y5I3 950 aa17.67■□□□□ 0.42
NEDD1-213ENST00000557644 CENPFP49454 3210 aa17.67■□□□□ 0.42
NEDD1-213ENST00000557644 CDKL5O76039 1030 aa17.67■□□□□ 0.42
NEDD1-213ENST00000557644 CCNA1P78396 465 aa17.67■□□□□ 0.42
NEDD1-213ENST00000557644 LACTBP83111 547 aaPredicted RBP17.67■□□□□ 0.42
NEDD1-213ENST00000557644 MUM1L1Q5H9M0 696 aa17.67■□□□□ 0.42
NEDD1-213ENST00000557644 HSCBQ8IWL3 235 aa17.67■□□□□ 0.42
NEDD1-213ENST00000557644 AIFM3Q96NN9 605 aa17.67■□□□□ 0.42
NEDD1-213ENST00000557644 TRERF1Q96PN7 1200 aa17.67■□□□□ 0.42
NEDD1-213ENST00000557644 FDPSP14324 419 aaKnown RBP17.66■□□□□ 0.42
NEDD1-213ENST00000557644 AKAP17AQ02040 695 aaKnown RBP17.66■□□□□ 0.42
NEDD1-213ENST00000557644 WWC2Q6AWC2 1192 aa17.66■□□□□ 0.42
NEDD1-213ENST00000557644 HEATR3Q7Z4Q2 680 aa17.66■□□□□ 0.42
NEDD1-213ENST00000557644 TRIM22Q8IYM9 498 aa17.66■□□□□ 0.42
NEDD1-213ENST00000557644 RNF146Q9NTX7 359 aa17.66■□□□□ 0.42
NEDD1-213ENST00000557644 HTTP42858 3142 aa17.66■□□□□ 0.42
NEDD1-213ENST00000557644 PFKFB3Q16875 520 aaPredicted RBP17.66■□□□□ 0.42
NEDD1-213ENST00000557644 TYW1BQ6NUM6 668 aa17.66■□□□□ 0.42
NEDD1-213ENST00000557644 CCAR1Q8IX12 1150 aaKnown RBP17.66■□□□□ 0.42
NEDD1-213ENST00000557644 CD99L2Q8TCZ2 262 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms