RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 JMJD7P0C870 316 aa4.2□□□□□ -1.74
TRAV28-201ENST00000557548 POU3F2P20265 443 aaPredicted RBP4.2□□□□□ -1.74
TRAV28-201ENST00000557548 IGFALSP35858 605 aa4.2□□□□□ -1.74
TRAV28-201ENST00000557548 KCNJ6P48051 423 aa4.2□□□□□ -1.74
TRAV28-201ENST00000557548 GFRA1P56159 465 aa4.2□□□□□ -1.74
TRAV28-201ENST00000557548 RNF4P78317 190 aa4.2□□□□□ -1.74
TRAV28-201ENST00000557548 TMPRSS15P98073 1019 aa4.2□□□□□ -1.74
TRAV28-201ENST00000557548 ITKQ08881 620 aa4.2□□□□□ -1.74
TRAV28-201ENST00000557548 MTMR1Q13613 665 aa4.2□□□□□ -1.74
TRAV28-201ENST00000557548 PPP2R5DQ14738 602 aa4.2□□□□□ -1.74
TRAV28-201ENST00000557548 STAT4Q14765 748 aa4.2□□□□□ -1.74
TRAV28-201ENST00000557548 DHCR24Q15392 516 aa4.2□□□□□ -1.74
TRAV28-201ENST00000557548 NTRK3Q16288 839 aa4.2□□□□□ -1.74
TRAV28-201ENST00000557548 ANKRD39Q53RE8 183 aa4.2□□□□□ -1.74
TRAV28-201ENST00000557548 GORABQ5T7V8 394 aa4.2□□□□□ -1.74
TRAV28-201ENST00000557548 GTF2IRD2BQ6EKJ0 949 aa4.2□□□□□ -1.74
TRAV28-201ENST00000557548 OGFOD2Q6N063 350 aa4.2□□□□□ -1.74
TRAV28-201ENST00000557548 KIAA1211Q6ZU35 1233 aa4.2□□□□□ -1.74
TRAV28-201ENST00000557548 ILDR2Q71H61 639 aa4.2□□□□□ -1.74
TRAV28-201ENST00000557548 NECAB2Q7Z6G3 386 aa4.2□□□□□ -1.74
TRAV28-201ENST00000557548 GTF2IRD2Q86UP8 949 aa4.2□□□□□ -1.74
TRAV28-201ENST00000557548 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.2□□□□□ -1.74
TRAV28-201ENST00000557548 ARHGEF39Q8N4T4 335 aa4.2□□□□□ -1.74
TRAV28-201ENST00000557548 DNAJB8Q8NHS0 232 aa4.2□□□□□ -1.74
TRAV28-201ENST00000557548 KCTD13Q8WZ19 329 aa4.2□□□□□ -1.74
TRAV28-201ENST00000557548 RCC1LQ96I51 464 aaKnown RBP4.2□□□□□ -1.74
TRAV28-201ENST00000557548 MTFR1LQ9H019 292 aa4.2□□□□□ -1.74
TRAV28-201ENST00000557548 CCDC8Q9H0W5 538 aaPredicted RBP4.2□□□□□ -1.74
TRAV28-201ENST00000557548 RNF208Q9H0X6 261 aa4.2□□□□□ -1.74
TRAV28-201ENST00000557548 MYH16Q9H6N6 1097 aa4.2□□□□□ -1.74
TRAV28-201ENST00000557548 NOL6Q9H6R4 1146 aaKnown RBP4.2□□□□□ -1.74
TRAV28-201ENST00000557548 CYP4F12Q9HCS2 524 aa4.2□□□□□ -1.74
TRAV28-201ENST00000557548 GEMIN8Q9NWZ8 242 aaKnown RBP4.2□□□□□ -1.74
TRAV28-201ENST00000557548 PHLDB1Q86UU1 1377 aa4.19□□□□□ -1.74
TRAV28-201ENST00000557548 MEGF11A6BM72 1044 aa4.19□□□□□ -1.74
TRAV28-201ENST00000557548 LRIG2O94898 1065 aa4.19□□□□□ -1.74
TRAV28-201ENST00000557548 NPTXRO95502 500 aa4.19□□□□□ -1.74
TRAV28-201ENST00000557548 SNRPB2P08579 225 aaKnown RBP4.19□□□□□ -1.74
TRAV28-201ENST00000557548 ASPAP45381 313 aa4.19□□□□□ -1.74
TRAV28-201ENST00000557548 RAB27AP51159 221 aa4.19□□□□□ -1.74
TRAV28-201ENST00000557548 NEK2P51955 445 aa4.19□□□□□ -1.74
TRAV28-201ENST00000557548 ZNF445P59923 1031 aa4.19□□□□□ -1.74
TRAV28-201ENST00000557548 SOX4Q06945 474 aaPredicted RBP4.19□□□□□ -1.74
TRAV28-201ENST00000557548 PRSS53Q2L4Q9 553 aa4.19□□□□□ -1.74
TRAV28-201ENST00000557548 CFAP100Q494V2 611 aa4.19□□□□□ -1.74
TRAV28-201ENST00000557548 NOL9Q5SY16 702 aaKnown RBP4.19□□□□□ -1.74
TRAV28-201ENST00000557548 TRAPPC3LQ5T215 181 aa4.19□□□□□ -1.74
TRAV28-201ENST00000557548 RNF219Q5W0B1 726 aaPredicted RBP4.19□□□□□ -1.74
TRAV28-201ENST00000557548 SPOCD1Q6ZMY3 1216 aa4.19□□□□□ -1.74
TRAV28-201ENST00000557548 SPATS2Q86XZ4 545 aaKnown RBP4.19□□□□□ -1.74
TRAV28-201ENST00000557548 SMYD4Q8IYR2 804 aaPredicted RBP4.19□□□□□ -1.74
TRAV28-201ENST00000557548 DTWD1Q8N5C7 304 aa4.19□□□□□ -1.74
TRAV28-201ENST00000557548 MFSD2AQ8NA29 543 aa4.19□□□□□ -1.74
TRAV28-201ENST00000557548 TMEM145Q8NBT3 493 aa4.19□□□□□ -1.74
TRAV28-201ENST00000557548 SMG8Q8ND04 991 aaKnown RBP4.19□□□□□ -1.74
TRAV28-201ENST00000557548 DCAF11Q8TEB1 546 aa4.19□□□□□ -1.74
TRAV28-201ENST00000557548 COG1Q8WTW3 980 aa4.19□□□□□ -1.74
TRAV28-201ENST00000557548 PMM1Q92871 262 aa4.19□□□□□ -1.74
TRAV28-201ENST00000557548 PTPRN2Q92932 1015 aa4.19□□□□□ -1.74
TRAV28-201ENST00000557548 RELTQ969Z4 430 aa4.19□□□□□ -1.74
TRAV28-201ENST00000557548 MIPEPQ99797 713 aa4.19□□□□□ -1.74
TRAV28-201ENST00000557548 SUGCTQ9HAC7 445 aa4.19□□□□□ -1.74
TRAV28-201ENST00000557548 FAM105AQ9NUU6 356 aa4.19□□□□□ -1.74
TRAV28-201ENST00000557548 ZIM2Q9NZV7 527 aa4.19□□□□□ -1.74
TRAV28-201ENST00000557548 FBXL21Q9UKT6 434 aa4.19□□□□□ -1.74
TRAV28-201ENST00000557548 CEP131Q9UPN4 1083 aa4.19□□□□□ -1.74
TRAV28-201ENST00000557548 GPR55Q9Y2T6 319 aaPredicted RBP4.19□□□□□ -1.74
TRAV28-201ENST00000557548 TRAF6Q9Y4K3 522 aa4.19□□□□□ -1.74
TRAV28-201ENST00000557548 PCDHB12Q9Y5F1 795 aa4.19□□□□□ -1.74
TRAV28-201ENST00000557548 ACTL7BQ9Y614 415 aa4.19□□□□□ -1.74
TRAV28-201ENST00000557548 TCRBV16S1A1N1A0A5B0 115 aa4.18□□□□□ -1.74
TRAV28-201ENST00000557548 RBAK-RBAKDNI3L0D1 243 aa4.18□□□□□ -1.74
TRAV28-201ENST00000557548 NEMP1O14524 444 aa4.18□□□□□ -1.74
TRAV28-201ENST00000557548 AKAP10O43572 662 aa4.18□□□□□ -1.74
TRAV28-201ENST00000557548 BRINP1O60477 761 aa4.18□□□□□ -1.74
TRAV28-201ENST00000557548 TIAF1O95411 115 aa4.18□□□□□ -1.74
TRAV28-201ENST00000557548 ATF3P18847 181 aa4.18□□□□□ -1.74
TRAV28-201ENST00000557548 FLT3P36888 993 aa4.18□□□□□ -1.74
TRAV28-201ENST00000557548 GNALP38405 381 aa4.18□□□□□ -1.74
TRAV28-201ENST00000557548 ECI1P42126 302 aa4.18□□□□□ -1.74
TRAV28-201ENST00000557548 GP2P55259 537 aaKnown RBP4.18□□□□□ -1.74
TRAV28-201ENST00000557548 RHBDL3P58872 404 aa4.18□□□□□ -1.74
TRAV28-201ENST00000557548 MAP4K2Q12851 820 aa4.18□□□□□ -1.74
TRAV28-201ENST00000557548 SNW1Q13573 536 aaKnown RBP4.18□□□□□ -1.74
TRAV28-201ENST00000557548 SKOR2Q2VWA4 1001 aaPredicted RBP4.18□□□□□ -1.74
TRAV28-201ENST00000557548 NBPF9Q3BBW0 867 aa4.18□□□□□ -1.74
TRAV28-201ENST00000557548 PIK3R6Q5UE93 754 aa4.18□□□□□ -1.74
TRAV28-201ENST00000557548 CDCA2Q69YH5 1023 aaPredicted RBP4.18□□□□□ -1.74
TRAV28-201ENST00000557548 LETMD1Q6P1Q0 360 aa4.18□□□□□ -1.74
TRAV28-201ENST00000557548 FDX2Q6P4F2 183 aa4.18□□□□□ -1.74
TRAV28-201ENST00000557548 USP53Q70EK8 1073 aa4.18□□□□□ -1.74
TRAV28-201ENST00000557548 C14orf80Q86SX3 495 aa4.18□□□□□ -1.74
TRAV28-201ENST00000557548 CDH24Q86UP0 819 aa4.18□□□□□ -1.74
TRAV28-201ENST00000557548 FBXO11Q86XK2 927 aa4.18□□□□□ -1.74
TRAV28-201ENST00000557548 FMR1NBQ8N0W7 255 aaPredicted RBP4.18□□□□□ -1.74
TRAV28-201ENST00000557548 FIBCD1Q8N539 461 aa4.18□□□□□ -1.74
TRAV28-201ENST00000557548 POU5F2Q8N7G0 328 aa4.18□□□□□ -1.74
TRAV28-201ENST00000557548 C12orf50Q8NA57 414 aaPredicted RBP4.18□□□□□ -1.74
TRAV28-201ENST00000557548 C2CD4AQ8NCU7 369 aaPredicted RBP4.18□□□□□ -1.74
TRAV28-201ENST00000557548 PI4K2BQ8TCG2 481 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms