RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 QRICH1Q2TAL8 776 aa14.24□□□□□ -0.13
SHMT2-233ENST00000557529 SHC4Q6S5L8 630 aa14.24□□□□□ -0.13
SHMT2-233ENST00000557529 RASGRP4Q8TDF6 673 aa14.24□□□□□ -0.13
SHMT2-233ENST00000557529 COA7Q96BR5 231 aa14.24□□□□□ -0.13
SHMT2-233ENST00000557529 FUCA2Q9BTY2 467 aa14.24□□□□□ -0.13
SHMT2-233ENST00000557529 RBSNQ9H1K0 784 aa14.24□□□□□ -0.13
SHMT2-233ENST00000557529 VCPKMTQ9H867 229 aa14.24□□□□□ -0.13
SHMT2-233ENST00000557529 RIC8AQ9NPQ8 531 aa14.24□□□□□ -0.13
SHMT2-233ENST00000557529 HPSEQ9Y251 543 aa14.24□□□□□ -0.13
SHMT2-233ENST00000557529 PITPNM2Q9BZ72 1349 aa14.24□□□□□ -0.13
SHMT2-233ENST00000557529 ADAMTS3O15072 1205 aa14.23□□□□□ -0.13
SHMT2-233ENST00000557529 PLA2G6O60733 806 aa14.23□□□□□ -0.13
SHMT2-233ENST00000557529 ZNF202O95125 648 aa14.23□□□□□ -0.13
SHMT2-233ENST00000557529 SYKP43405 635 aa14.23□□□□□ -0.13
SHMT2-233ENST00000557529 PTGDRQ13258 359 aa14.23□□□□□ -0.13
SHMT2-233ENST00000557529 C9orf131Q5VYM1 1079 aa14.23□□□□□ -0.13
SHMT2-233ENST00000557529 ARL6IP4Q66PJ3 421 aaKnown RBP14.23□□□□□ -0.13
SHMT2-233ENST00000557529 CHURC1Q8WUH1 139 aa14.23□□□□□ -0.13
SHMT2-233ENST00000557529 CUL5Q93034 780 aa14.23□□□□□ -0.13
SHMT2-233ENST00000557529 CLIC6Q96NY7 704 aa14.23□□□□□ -0.13
SHMT2-233ENST00000557529 NUP88Q99567 741 aaPredicted RBP14.23□□□□□ -0.13
SHMT2-233ENST00000557529 SDF4Q9BRK5 362 aa14.23□□□□□ -0.13
SHMT2-233ENST00000557529 AMNQ9BXJ7 453 aa14.23□□□□□ -0.13
SHMT2-233ENST00000557529 ADARB2Q9NS39 739 aaKnown RBP14.23□□□□□ -0.13
SHMT2-233ENST00000557529 GGA3Q9NZ52 723 aa14.23□□□□□ -0.13
SHMT2-233ENST00000557529 LAD1O00515 517 aa14.22□□□□□ -0.13
SHMT2-233ENST00000557529 PPP1R11O60927 126 aaPredicted RBP14.22□□□□□ -0.13
SHMT2-233ENST00000557529 DDNO94850 711 aaPredicted RBP14.22□□□□□ -0.13
SHMT2-233ENST00000557529 STAT2P52630 851 aa14.22□□□□□ -0.13
SHMT2-233ENST00000557529 INF2Q27J81 1249 aa14.22□□□□□ -0.13
SHMT2-233ENST00000557529 NBPF12Q5TAG4 269 aaPredicted RBP14.22□□□□□ -0.13
SHMT2-233ENST00000557529 MCTP2Q6DN12 878 aa14.22□□□□□ -0.13
SHMT2-233ENST00000557529 SASS6Q6UVJ0 657 aa14.22□□□□□ -0.13
SHMT2-233ENST00000557529 ILDR2Q71H61 639 aa14.22□□□□□ -0.13
SHMT2-233ENST00000557529 FAM160B2Q86V87 743 aa14.22□□□□□ -0.13
SHMT2-233ENST00000557529 TEX2Q8IWB9 1127 aa14.22□□□□□ -0.13
SHMT2-233ENST00000557529 CKAP2LQ8IYA6 745 aa14.22□□□□□ -0.13
SHMT2-233ENST00000557529 SPICE1Q8N0Z3 855 aa14.22□□□□□ -0.13
SHMT2-233ENST00000557529 ANP32BQ92688 251 aaKnown RBP14.22□□□□□ -0.13
SHMT2-233ENST00000557529 FEZ1Q99689 392 aa14.22□□□□□ -0.13
SHMT2-233ENST00000557529 KCNH3Q9ULD8 1083 aa14.22□□□□□ -0.13
SHMT2-233ENST00000557529 SCAF8Q9UPN6 1271 aaKnown RBP14.22□□□□□ -0.13
SHMT2-233ENST00000557529 PCDHA1Q9Y5I3 950 aa14.22□□□□□ -0.13
SHMT2-233ENST00000557529 WNT7AO00755 349 aa14.22□□□□□ -0.13
SHMT2-233ENST00000557529 CAVIN2O95810 425 aa14.22□□□□□ -0.13
SHMT2-233ENST00000557529 MCM7P33993 719 aa14.22□□□□□ -0.13
SHMT2-233ENST00000557529 HIRAP54198 1017 aaPredicted RBP14.22□□□□□ -0.13
SHMT2-233ENST00000557529 TYRO3Q06418 890 aa14.22□□□□□ -0.13
SHMT2-233ENST00000557529 SUPT20HL1Q3ZLR7 823 aa14.22□□□□□ -0.13
SHMT2-233ENST00000557529 FAM83BQ5T0W9 1011 aa14.22□□□□□ -0.13
SHMT2-233ENST00000557529 NEK8Q86SG6 692 aa14.22□□□□□ -0.13
SHMT2-233ENST00000557529 FBXO11Q86XK2 927 aa14.22□□□□□ -0.13
SHMT2-233ENST00000557529 ELOA2Q8IYF1 753 aaPredicted RBP14.22□□□□□ -0.13
SHMT2-233ENST00000557529 LPAR1Q92633 364 aa14.22□□□□□ -0.13
SHMT2-233ENST00000557529 PSTPIP2Q9H939 334 aa14.22□□□□□ -0.13
SHMT2-233ENST00000557529 BIN2Q9UBW5 565 aaPredicted RBP14.22□□□□□ -0.13
SHMT2-233ENST00000557529 ZNF112Q9UJU3 913 aa14.22□□□□□ -0.13
SHMT2-233ENST00000557529 FEM1BQ9UK73 627 aa14.22□□□□□ -0.13
SHMT2-233ENST00000557529 PRR12Q9ULL5 1215 aa14.22□□□□□ -0.13
SHMT2-233ENST00000557529 UVSSAQ2YD98 709 aa14.21□□□□□ -0.14
SHMT2-233ENST00000557529 JAKMIP3Q5VZ66 844 aa14.21□□□□□ -0.14
SHMT2-233ENST00000557529 DPY19L2Q6NUT2 758 aa14.21□□□□□ -0.14
SHMT2-233ENST00000557529 SCYL3Q8IZE3 742 aa14.21□□□□□ -0.14
SHMT2-233ENST00000557529 KIAA1683Q9H0B3 1180 aa14.21□□□□□ -0.14
SHMT2-233ENST00000557529 CSRNP2Q9H175 543 aa14.21□□□□□ -0.14
SHMT2-233ENST00000557529 HOOK1Q9UJC3 728 aaKnown RBP14.21□□□□□ -0.14
SHMT2-233ENST00000557529 ZC3H4Q9UPT8 1303 aaKnown RBP14.21□□□□□ -0.14
SHMT2-233ENST00000557529 PRPHP41219 470 aa14.2□□□□□ -0.14
SHMT2-233ENST00000557529 CLK2P49760 499 aaKnown RBP14.2□□□□□ -0.14
SHMT2-233ENST00000557529 USP14P54578 494 aa14.2□□□□□ -0.14
SHMT2-233ENST00000557529 KIAA1755Q5JYT7 1200 aa14.2□□□□□ -0.14
SHMT2-233ENST00000557529 C4orf32Q8N8J7 132 aa14.2□□□□□ -0.14
SHMT2-233ENST00000557529 TBCKQ8TEA7 893 aa14.2□□□□□ -0.14
SHMT2-233ENST00000557529 CCDC34Q96HJ3 373 aa14.2□□□□□ -0.14
SHMT2-233ENST00000557529 NAP1L4Q99733 375 aaKnown RBP14.2□□□□□ -0.14
SHMT2-233ENST00000557529 PYM1Q9BRP8 204 aaKnown RBP14.2□□□□□ -0.14
SHMT2-233ENST00000557529 AS3MTQ9HBK9 375 aa14.2□□□□□ -0.14
SHMT2-233ENST00000557529 VWA3AA6NCI4 1184 aa14.19□□□□□ -0.14
SHMT2-233ENST00000557529 WDR46O15213 610 aaKnown RBP14.19□□□□□ -0.14
SHMT2-233ENST00000557529 INPP5BP32019 993 aa14.19□□□□□ -0.14
SHMT2-233ENST00000557529 LONP1P36776 959 aaKnown RBP14.19□□□□□ -0.14
SHMT2-233ENST00000557529 GRIN1Q05586 938 aa14.19□□□□□ -0.14
SHMT2-233ENST00000557529 ZYXQ15942 572 aaKnown RBP14.19□□□□□ -0.14
SHMT2-233ENST00000557529 STX1AQ16623 288 aa14.19□□□□□ -0.14
SHMT2-233ENST00000557529 KANK3Q6NY19 840 aa14.19□□□□□ -0.14
SHMT2-233ENST00000557529 KRBA2Q6ZNG9 492 aa14.19□□□□□ -0.14
SHMT2-233ENST00000557529 RNF214Q8ND24 703 aa14.19□□□□□ -0.14
SHMT2-233ENST00000557529 DCPSQ96C86 337 aaKnown RBP14.19□□□□□ -0.14
SHMT2-233ENST00000557529 L3MBTL3Q96JM7 780 aaPredicted RBP14.19□□□□□ -0.14
SHMT2-233ENST00000557529 WDR18Q9BV38 432 aa14.19□□□□□ -0.14
SHMT2-233ENST00000557529 GLIS2Q9BZE0 524 aaPredicted RBP14.19□□□□□ -0.14
SHMT2-233ENST00000557529 PICK1Q9NRD5 415 aa14.19□□□□□ -0.14
SHMT2-233ENST00000557529 TMEM260Q9NX78 707 aa14.19□□□□□ -0.14
SHMT2-233ENST00000557529 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.19□□□□□ -0.14
SHMT2-233ENST00000557529 MRVI1Q9Y6F6 885 aa14.19□□□□□ -0.14
SHMT2-233ENST00000557529 ATAD5Q96QE3 1844 aa14.18□□□□□ -0.14
SHMT2-233ENST00000557529 GRIN3BO60391 1043 aa14.18□□□□□ -0.14
SHMT2-233ENST00000557529 CCNT1O60563 726 aaKnown RBP14.18□□□□□ -0.14
SHMT2-233ENST00000557529 AP3B2Q13367 1082 aa14.18□□□□□ -0.14
SHMT2-233ENST00000557529 ZRSR1Q15695 479 aaKnown RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms