RNA–Protein interactions for RNA: ENST00000557514.1

TRAV33-201, Transcript of T cell receptor alpha variable 33 (pseudogene), humanhuman

BASIC

Gene TRAV33, Length 338 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV33-201ENST00000557514 SPRED2Q7Z698 418 aa12.59□□□□□ -0.39
TRAV33-201ENST00000557514 PHOSPHO2Q8TCD6 241 aa12.59□□□□□ -0.39
TRAV33-201ENST00000557514 UBE2ZQ9H832 354 aaPredicted RBP12.59□□□□□ -0.39
TRAV33-201ENST00000557514 MCM9Q9NXL9 1143 aa12.59□□□□□ -0.39
TRAV33-201ENST00000557514 SWAP70Q9UH65 585 aa12.59□□□□□ -0.39
TRAV33-201ENST00000557514 DBNLQ9UJU6 430 aaKnown RBP12.59□□□□□ -0.39
TRAV33-201ENST00000557514 NOB1Q9ULX3 412 aaKnown RBP12.59□□□□□ -0.39
TRAV33-201ENST00000557514 CSPP1Q1MSJ5 1256 aa12.58□□□□□ -0.4
TRAV33-201ENST00000557514 LEXMQ3ZCV2 418 aa12.58□□□□□ -0.4
TRAV33-201ENST00000557514 SNRNP48Q6IEG0 339 aaKnown RBP12.58□□□□□ -0.4
TRAV33-201ENST00000557514 HERC6Q8IVU3 1022 aa12.58□□□□□ -0.4
TRAV33-201ENST00000557514 DDX11Q96FC9 970 aa12.58□□□□□ -0.4
TRAV33-201ENST00000557514 TLR7Q9NYK1 1049 aaKnown RBP12.58□□□□□ -0.4
TRAV33-201ENST00000557514 LMCD1Q9NZU5 365 aa12.58□□□□□ -0.4
TRAV33-201ENST00000557514 GNEQ9Y223 722 aaKnown RBP12.58□□□□□ -0.4
TRAV33-201ENST00000557514 RIPK3Q9Y572 518 aa12.58□□□□□ -0.4
TRAV33-201ENST00000557514 ZNF318Q5VUA4 2279 aa12.58□□□□□ -0.4
TRAV33-201ENST00000557514 GBF1Q92538 1859 aa12.57□□□□□ -0.4
TRAV33-201ENST00000557514 ATP2A1O14983 1001 aa12.57□□□□□ -0.4
TRAV33-201ENST00000557514 DCXO43602 365 aa12.57□□□□□ -0.4
TRAV33-201ENST00000557514 CYP2D6P10635 497 aa12.57□□□□□ -0.4
TRAV33-201ENST00000557514 FSCN1Q16658 493 aaKnown RBP12.57□□□□□ -0.4
TRAV33-201ENST00000557514 FAM83BQ5T0W9 1011 aa12.57□□□□□ -0.4
TRAV33-201ENST00000557514 TLK2Q86UE8 772 aa12.57□□□□□ -0.4
TRAV33-201ENST00000557514 CRNKL1Q9BZJ0 848 aaKnown RBP12.57□□□□□ -0.4
TRAV33-201ENST00000557514 ALDH8A1Q9H2A2 487 aaPredicted RBP12.57□□□□□ -0.4
TRAV33-201ENST00000557514 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.56□□□□□ -0.4
TRAV33-201ENST00000557514 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.56□□□□□ -0.4
TRAV33-201ENST00000557514 POTEB3A0JP26 581 aa12.56□□□□□ -0.4
TRAV33-201ENST00000557514 IL9P15248 144 aa12.56□□□□□ -0.4
TRAV33-201ENST00000557514 SSTR3P32745 418 aaPredicted RBP12.56□□□□□ -0.4
TRAV33-201ENST00000557514 POTEBQ6S5H4 581 aa12.56□□□□□ -0.4
TRAV33-201ENST00000557514 CCDC144CPQ8IYA2 1237 aa12.56□□□□□ -0.4
TRAV33-201ENST00000557514 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.56□□□□□ -0.4
TRAV33-201ENST00000557514 GDPD5Q8WTR4 605 aa12.56□□□□□ -0.4
TRAV33-201ENST00000557514 DYNLL2Q96FJ2 89 aa12.56□□□□□ -0.4
TRAV33-201ENST00000557514 CCDC17Q96LX7 622 aa12.56□□□□□ -0.4
TRAV33-201ENST00000557514 SLF1Q9BQI6 1058 aa12.56□□□□□ -0.4
TRAV33-201ENST00000557514 ANTXR1Q9H6X2 564 aa12.56□□□□□ -0.4
TRAV33-201ENST00000557514 GOPCQ9HD26 462 aa12.56□□□□□ -0.4
TRAV33-201ENST00000557514 DCP1AQ9NPI6 582 aaPredicted RBP12.56□□□□□ -0.4
TRAV33-201ENST00000557514 MYH1P12882 1939 aa12.56□□□□□ -0.4
TRAV33-201ENST00000557514 CACNA1HO95180 2353 aa12.55□□□□□ -0.4
TRAV33-201ENST00000557514 MAGEB6P1A0A0J9YX57 407 aa12.55□□□□□ -0.4
TRAV33-201ENST00000557514 GNAI2P04899 355 aa12.55□□□□□ -0.4
TRAV33-201ENST00000557514 ACTN1P12814 892 aa12.55□□□□□ -0.4
TRAV33-201ENST00000557514 EEF2P13639 858 aaKnown RBP12.55□□□□□ -0.4
TRAV33-201ENST00000557514 KCNA5P22460 613 aa12.55□□□□□ -0.4
TRAV33-201ENST00000557514 RFC2P35250 354 aa12.55□□□□□ -0.4
TRAV33-201ENST00000557514 PSMC6P62333 389 aa12.55□□□□□ -0.4
TRAV33-201ENST00000557514 TNFAIP2Q03169 654 aa12.55□□□□□ -0.4
TRAV33-201ENST00000557514 DEFB128Q7Z7B8 93 aa12.55□□□□□ -0.4
TRAV33-201ENST00000557514 SDR42E1Q8WUS8 393 aa12.55□□□□□ -0.4
TRAV33-201ENST00000557514 TRMT13Q9NUP7 481 aaKnown RBP12.55□□□□□ -0.4
TRAV33-201ENST00000557514 ZNF536O15090 1300 aa12.55□□□□□ -0.4
TRAV33-201ENST00000557514 PARP14Q460N5 1801 aa12.55□□□□□ -0.4
TRAV33-201ENST00000557514 LCHNA4D1U4 455 aa12.54□□□□□ -0.4
TRAV33-201ENST00000557514 KIF28PB7ZC32 967 aa12.54□□□□□ -0.4
TRAV33-201ENST00000557514 ST18O60284 1047 aa12.54□□□□□ -0.4
TRAV33-201ENST00000557514 CYP2C9P11712 490 aa12.54□□□□□ -0.4
TRAV33-201ENST00000557514 PTGS1P23219 599 aa12.54□□□□□ -0.4
TRAV33-201ENST00000557514 SLFN5Q08AF3 891 aa12.54□□□□□ -0.4
TRAV33-201ENST00000557514 POLA2Q14181 598 aa12.54□□□□□ -0.4
TRAV33-201ENST00000557514 HFE2Q6ZVN8 426 aa12.54□□□□□ -0.4
TRAV33-201ENST00000557514 KANSL2Q9H9L4 492 aa12.54□□□□□ -0.4
TRAV33-201ENST00000557514 GRXCR2A6NFK2 248 aa12.53□□□□□ -0.4
TRAV33-201ENST00000557514 ZEB2O60315 1214 aa12.53□□□□□ -0.4
TRAV33-201ENST00000557514 BAIAP3O94812 1187 aa12.53□□□□□ -0.4
TRAV33-201ENST00000557514 CT47B1P0C2W7 299 aaPredicted RBP12.53□□□□□ -0.4
TRAV33-201ENST00000557514 SUPT20HL2P0C7V6 817 aa12.53□□□□□ -0.4
TRAV33-201ENST00000557514 PTCRAQ6ISU1 281 aaPredicted RBP12.53□□□□□ -0.4
TRAV33-201ENST00000557514 NOL8Q76FK4 1167 aaKnown RBP12.53□□□□□ -0.4
TRAV33-201ENST00000557514 ANKRD35Q8N283 1001 aa12.53□□□□□ -0.4
TRAV33-201ENST00000557514 FAM133AQ8N9E0 248 aa12.53□□□□□ -0.4
TRAV33-201ENST00000557514 PHOX2BQ99453 314 aa12.53□□□□□ -0.4
TRAV33-201ENST00000557514 NUP88Q99567 741 aaPredicted RBP12.53□□□□□ -0.4
TRAV33-201ENST00000557514 FBXO40Q9UH90 709 aa12.53□□□□□ -0.4
TRAV33-201ENST00000557514 MYO15AQ9UKN7 3530 aa12.53□□□□□ -0.4
TRAV33-201ENST00000557514 COL4A4P53420 1690 aaPredicted RBP12.53□□□□□ -0.4
TRAV33-201ENST00000557514 TNKSO95271 1327 aa12.53□□□□□ -0.4
TRAV33-201ENST00000557514 NAV1Q8NEY1 1877 aa12.53□□□□□ -0.4
TRAV33-201ENST00000557514 PITPNM1O00562 1244 aa12.52□□□□□ -0.41
TRAV33-201ENST00000557514 PDE6AP16499 860 aa12.52□□□□□ -0.41
TRAV33-201ENST00000557514 SMPD1P17405 629 aa12.52□□□□□ -0.41
TRAV33-201ENST00000557514 ZP2Q05996 745 aa12.52□□□□□ -0.41
TRAV33-201ENST00000557514 OS9Q13438 667 aaPredicted RBP12.52□□□□□ -0.41
TRAV33-201ENST00000557514 LCORLQ8N3X6 602 aa12.52□□□□□ -0.41
TRAV33-201ENST00000557514 CHST13Q8NET6 341 aa12.52□□□□□ -0.41
TRAV33-201ENST00000557514 ANKS1AQ92625 1134 aa12.52□□□□□ -0.41
TRAV33-201ENST00000557514 EAF2Q96CJ1 260 aaPredicted RBP12.52□□□□□ -0.41
TRAV33-201ENST00000557514 AP5M1Q9H0R1 490 aa12.52□□□□□ -0.41
TRAV33-201ENST00000557514 SUGCTQ9HAC7 445 aa12.52□□□□□ -0.41
TRAV33-201ENST00000557514 SLC38A10Q9HBR0 1119 aa12.52□□□□□ -0.41
TRAV33-201ENST00000557514 ZFHX2Q9C0A1 2572 aaPredicted RBP12.52□□□□□ -0.41
TRAV33-201ENST00000557514 DYNC1LI2O43237 492 aaPredicted RBP12.51□□□□□ -0.41
TRAV33-201ENST00000557514 CDK8P49336 464 aa12.51□□□□□ -0.41
TRAV33-201ENST00000557514 OAZ1P54368 228 aa12.51□□□□□ -0.41
TRAV33-201ENST00000557514 FOXK2Q01167 660 aa12.51□□□□□ -0.41
TRAV33-201ENST00000557514 CNTN2Q02246 1040 aa12.51□□□□□ -0.41
TRAV33-201ENST00000557514 PUS10Q3MIT2 529 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms