RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 TRIM27P14373 513 aa7.12□□□□□ -1.27
VPS33B-207ENST00000557470 ERCC3P19447 782 aa7.12□□□□□ -1.27
VPS33B-207ENST00000557470 SHMT1P34896 483 aa7.12□□□□□ -1.27
VPS33B-207ENST00000557470 ADCYAP1R1P41586 468 aa7.12□□□□□ -1.27
VPS33B-207ENST00000557470 USP5P45974 858 aa7.12□□□□□ -1.27
VPS33B-207ENST00000557470 GCGRP47871 477 aa7.12□□□□□ -1.27
VPS33B-207ENST00000557470 EPHB4P54760 987 aa7.12□□□□□ -1.27
VPS33B-207ENST00000557470 TLE2Q04725 743 aa7.12□□□□□ -1.27
VPS33B-207ENST00000557470 LRRC41Q15345 812 aa7.12□□□□□ -1.27
VPS33B-207ENST00000557470 CERKLQ49MI3 558 aaPredicted RBP7.12□□□□□ -1.27
VPS33B-207ENST00000557470 FAM47AQ5JRC9 791 aa7.12□□□□□ -1.27
VPS33B-207ENST00000557470 PRAMEF19Q5SWL8 479 aa7.12□□□□□ -1.27
VPS33B-207ENST00000557470 USP38Q8NB14 1042 aa7.12□□□□□ -1.27
VPS33B-207ENST00000557470 ARHGAP45Q92619 1136 aa7.12□□□□□ -1.27
VPS33B-207ENST00000557470 ZNF512BQ96KM6 892 aaPredicted RBP7.12□□□□□ -1.27
VPS33B-207ENST00000557470 RNPC3Q96LT9 517 aaKnown RBP7.12□□□□□ -1.27
VPS33B-207ENST00000557470 GPR108Q9NPR9 543 aa7.12□□□□□ -1.27
VPS33B-207ENST00000557470 TLR7Q9NYK1 1049 aaKnown RBP7.12□□□□□ -1.27
VPS33B-207ENST00000557470 TNNQ9UQP3 1299 aa7.12□□□□□ -1.27
VPS33B-207ENST00000557470 COG6Q9Y2V7 657 aa7.12□□□□□ -1.27
VPS33B-207ENST00000557470 MYO5AQ9Y4I1 1855 aaKnown RBP7.12□□□□□ -1.27
VPS33B-207ENST00000557470 MYH1P12882 1939 aa7.11□□□□□ -1.27
VPS33B-207ENST00000557470 A0A0G2JMZ2 1700 aa7.11□□□□□ -1.27
VPS33B-207ENST00000557470 TMEM265A0A087WTH1 108 aa7.11□□□□□ -1.27
VPS33B-207ENST00000557470 A0A1W2PRG0 241 aa7.11□□□□□ -1.27
VPS33B-207ENST00000557470 LCE2BO14633 110 aa7.11□□□□□ -1.27
VPS33B-207ENST00000557470 STRNO43815 780 aa7.11□□□□□ -1.27
VPS33B-207ENST00000557470 PLCD1P51178 756 aa7.11□□□□□ -1.27
VPS33B-207ENST00000557470 GRIN2CQ14957 1233 aa7.11□□□□□ -1.27
VPS33B-207ENST00000557470 SEPT2Q15019 361 aa7.11□□□□□ -1.27
VPS33B-207ENST00000557470 KIAA1755Q5JYT7 1200 aa7.11□□□□□ -1.27
VPS33B-207ENST00000557470 C1orf53Q5VUE5 145 aa7.11□□□□□ -1.27
VPS33B-207ENST00000557470 TTC6Q86TZ1 520 aa7.11□□□□□ -1.27
VPS33B-207ENST00000557470 CERS3Q8IU89 383 aa7.11□□□□□ -1.27
VPS33B-207ENST00000557470 MAGEB6Q8N7X4 407 aa7.11□□□□□ -1.27
VPS33B-207ENST00000557470 SHCBP1Q8NEM2 672 aa7.11□□□□□ -1.27
VPS33B-207ENST00000557470 SYMPKQ92797 1274 aaKnown RBP7.11□□□□□ -1.27
VPS33B-207ENST00000557470 TANGO6Q9C0B7 1094 aa7.11□□□□□ -1.27
VPS33B-207ENST00000557470 SPATC1LQ9H0A9 340 aa7.11□□□□□ -1.27
VPS33B-207ENST00000557470 CABP5Q9NP86 173 aa7.11□□□□□ -1.27
VPS33B-207ENST00000557470 DBNLQ9UJU6 430 aaKnown RBP7.11□□□□□ -1.27
VPS33B-207ENST00000557470 BDP1A6H8Y1 2624 aa7.11□□□□□ -1.27
VPS33B-207ENST00000557470 PQBP1O60828 265 aaKnown RBP7.1□□□□□ -1.27
VPS33B-207ENST00000557470 CLTBP09497 229 aa7.1□□□□□ -1.27
VPS33B-207ENST00000557470 GABPAQ06546 454 aa7.1□□□□□ -1.27
VPS33B-207ENST00000557470 OS9Q13438 667 aaPredicted RBP7.1□□□□□ -1.27
VPS33B-207ENST00000557470 PLS1Q14651 629 aa7.1□□□□□ -1.27
VPS33B-207ENST00000557470 COG2Q14746 738 aa7.1□□□□□ -1.27
VPS33B-207ENST00000557470 PLA2G2CQ5R387 149 aa7.1□□□□□ -1.27
VPS33B-207ENST00000557470 NCAPG2Q86XI2 1143 aa7.1□□□□□ -1.27
VPS33B-207ENST00000557470 ABRAQ8N0Z2 381 aa7.1□□□□□ -1.27
VPS33B-207ENST00000557470 MAML3Q96JK9 1138 aa7.1□□□□□ -1.27
VPS33B-207ENST00000557470 SPSB2Q99619 263 aa7.1□□□□□ -1.27
VPS33B-207ENST00000557470 SLC6A16Q9GZN6 736 aa7.1□□□□□ -1.27
VPS33B-207ENST00000557470 CCDC8Q9H0W5 538 aaPredicted RBP7.1□□□□□ -1.27
VPS33B-207ENST00000557470 ANTXR1Q9H6X2 564 aa7.1□□□□□ -1.27
VPS33B-207ENST00000557470 XPNPEP3Q9NQH7 507 aa7.1□□□□□ -1.27
VPS33B-207ENST00000557470 SLC5A4Q9NY91 659 aa7.1□□□□□ -1.27
VPS33B-207ENST00000557470 HOXC10Q9NYD6 342 aa7.1□□□□□ -1.27
VPS33B-207ENST00000557470 PHF24Q9UPV7 400 aa7.1□□□□□ -1.27
VPS33B-207ENST00000557470 SLC27A5Q9Y2P5 690 aa7.1□□□□□ -1.27
VPS33B-207ENST00000557470 TACC3Q9Y6A5 838 aa7.1□□□□□ -1.27
VPS33B-207ENST00000557470 A0A1W2PQ45 241 aaPredicted RBP7.09□□□□□ -1.27
VPS33B-207ENST00000557470 A0A1W2PQY0 241 aa7.09□□□□□ -1.27
VPS33B-207ENST00000557470 TNFRSF10AO00220 468 aa7.09□□□□□ -1.27
VPS33B-207ENST00000557470 MPHOSPH10O00566 681 aaKnown RBP7.09□□□□□ -1.27
VPS33B-207ENST00000557470 KIAA0355O15063 1070 aa7.09□□□□□ -1.27
VPS33B-207ENST00000557470 SURF6O75683 361 aaKnown RBP7.09□□□□□ -1.27
VPS33B-207ENST00000557470 BCAR3O75815 825 aa7.09□□□□□ -1.27
VPS33B-207ENST00000557470 FLOT1O75955 427 aa7.09□□□□□ -1.27
VPS33B-207ENST00000557470 PGK1P00558 417 aa7.09□□□□□ -1.27
VPS33B-207ENST00000557470 POLR3DP05423 398 aaPredicted RBP7.09□□□□□ -1.27
VPS33B-207ENST00000557470 PGK2P07205 417 aa7.09□□□□□ -1.27
VPS33B-207ENST00000557470 RARBP10826 455 aa7.09□□□□□ -1.27
VPS33B-207ENST00000557470 MS4A1P11836 297 aa7.09□□□□□ -1.27
VPS33B-207ENST00000557470 RAG1P15918 1043 aa7.09□□□□□ -1.27
VPS33B-207ENST00000557470 TAL1P17542 331 aaPredicted RBP7.09□□□□□ -1.27
VPS33B-207ENST00000557470 SLC19A1P41440 591 aa7.09□□□□□ -1.27
VPS33B-207ENST00000557470 FPGSQ05932 587 aa7.09□□□□□ -1.27
VPS33B-207ENST00000557470 LIAT1Q6ZQX7 453 aa7.09□□□□□ -1.27
VPS33B-207ENST00000557470 CLEC10AQ8IUN9 316 aa7.09□□□□□ -1.27
VPS33B-207ENST00000557470 SPICE1Q8N0Z3 855 aa7.09□□□□□ -1.27
VPS33B-207ENST00000557470 MB21D1Q8N884 522 aa7.09□□□□□ -1.27
VPS33B-207ENST00000557470 SSH3Q8TE77 659 aa7.09□□□□□ -1.27
VPS33B-207ENST00000557470 FRAT1Q92837 279 aaPredicted RBP7.09□□□□□ -1.27
VPS33B-207ENST00000557470 LENG1Q96BZ8 264 aaPredicted RBP7.09□□□□□ -1.27
VPS33B-207ENST00000557470 EAF2Q96CJ1 260 aaPredicted RBP7.09□□□□□ -1.27
VPS33B-207ENST00000557470 ATG4CQ96DT6 458 aa7.09□□□□□ -1.27
VPS33B-207ENST00000557470 THAP11Q96EK4 314 aa7.09□□□□□ -1.27
VPS33B-207ENST00000557470 RIOK1Q9BRS2 568 aaKnown RBP7.09□□□□□ -1.27
VPS33B-207ENST00000557470 MROH8Q9H579 483 aa7.09□□□□□ -1.27
VPS33B-207ENST00000557470 RAPGEFL1Q9UHV5 662 aa7.09□□□□□ -1.27
VPS33B-207ENST00000557470 USTQ9Y2C2 406 aa7.09□□□□□ -1.27
VPS33B-207ENST00000557470 ROBO3Q96MS0 1386 aa7.08□□□□□ -1.28
VPS33B-207ENST00000557470 CHD7Q9P2D1 2997 aa7.08□□□□□ -1.28
VPS33B-207ENST00000557470 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.08□□□□□ -1.28
VPS33B-207ENST00000557470 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.08□□□□□ -1.28
VPS33B-207ENST00000557470 IPO8O15397 1037 aaKnown RBP7.08□□□□□ -1.28
VPS33B-207ENST00000557470 CYP2D6P10635 497 aa7.08□□□□□ -1.28
VPS33B-207ENST00000557470 FCER1AP12319 257 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms