RNA–Protein interactions for RNA: ENST00000557424.1

HMGB1P14-201, Transcript of high mobility group box 1 pseudogene 14, humanhuman

BASIC

Gene HMGB1P14, Length 591 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P14-201ENST00000557424 SLKQ9H2G2 1235 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P14-201ENST00000557424 PFDN2Q9UHV9 154 aa4.25□□□□□ -1.73
HMGB1P14-201ENST00000557424 DUSP13Q9UII6 198 aa4.25□□□□□ -1.73
HMGB1P14-201ENST00000557424 CD2APQ9Y5K6 639 aa4.25□□□□□ -1.73
HMGB1P14-201ENST00000557424 EID1Q9Y6B2 187 aa4.25□□□□□ -1.73
HMGB1P14-201ENST00000557424 PITPNM2Q9BZ72 1349 aa4.24□□□□□ -1.73
HMGB1P14-201ENST00000557424 B2RBV5 119 aa4.24□□□□□ -1.73
HMGB1P14-201ENST00000557424 PDPK1O15530 556 aa4.24□□□□□ -1.73
HMGB1P14-201ENST00000557424 POLR2BP30876 1174 aaKnown RBP4.24□□□□□ -1.73
HMGB1P14-201ENST00000557424 CHRNEQ04844 493 aa4.24□□□□□ -1.73
HMGB1P14-201ENST00000557424 FAM50AQ14320 339 aaKnown RBP4.24□□□□□ -1.73
HMGB1P14-201ENST00000557424 MAP9Q49MG5 647 aa4.24□□□□□ -1.73
HMGB1P14-201ENST00000557424 LCE1DQ5T752 114 aa4.24□□□□□ -1.73
HMGB1P14-201ENST00000557424 CDKAL1Q5VV42 579 aa4.24□□□□□ -1.73
HMGB1P14-201ENST00000557424 CYP2R1Q6VVX0 501 aa4.24□□□□□ -1.73
HMGB1P14-201ENST00000557424 C16orf86Q6ZW13 317 aa4.24□□□□□ -1.73
HMGB1P14-201ENST00000557424 SPATC1Q76KD6 591 aa4.24□□□□□ -1.73
HMGB1P14-201ENST00000557424 APBB1IPQ7Z5R6 666 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P14-201ENST00000557424 ADAT2Q7Z6V5 191 aaKnown RBP4.24□□□□□ -1.73
HMGB1P14-201ENST00000557424 TSPYL5Q86VY4 417 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P14-201ENST00000557424 TP53INP2Q8IXH6 220 aa4.24□□□□□ -1.73
HMGB1P14-201ENST00000557424 FAM178BQ8IXR5 827 aa4.24□□□□□ -1.73
HMGB1P14-201ENST00000557424 CCDC140Q96MF4 163 aa4.24□□□□□ -1.73
HMGB1P14-201ENST00000557424 ZFP64Q9NPA5 681 aa4.24□□□□□ -1.73
HMGB1P14-201ENST00000557424 CHST7Q9NS84 486 aa4.24□□□□□ -1.73
HMGB1P14-201ENST00000557424 HOMER2Q9NSB8 354 aa4.24□□□□□ -1.73
HMGB1P14-201ENST00000557424 LRP2BPQ9P2M1 347 aa4.24□□□□□ -1.73
HMGB1P14-201ENST00000557424 MAGEC2Q9UBF1 373 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P14-201ENST00000557424 ZC3H7BQ9UGR2 993 aaKnown RBP4.24□□□□□ -1.73
HMGB1P14-201ENST00000557424 PTCH2Q9Y6C5 1203 aa4.24□□□□□ -1.73
HMGB1P14-201ENST00000557424 H3BS24 57 aa4.23□□□□□ -1.73
HMGB1P14-201ENST00000557424 PRC1O43663 620 aa4.23□□□□□ -1.73
HMGB1P14-201ENST00000557424 DNAJA2O60884 412 aa4.23□□□□□ -1.73
HMGB1P14-201ENST00000557424 ASMTLO95671 621 aa4.23□□□□□ -1.73
HMGB1P14-201ENST00000557424 VIL1P09327 827 aaKnown RBP4.23□□□□□ -1.73
HMGB1P14-201ENST00000557424 SPINK2P20155 84 aa4.23□□□□□ -1.73
HMGB1P14-201ENST00000557424 TPP2P29144 1249 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P14-201ENST00000557424 SSTR4P31391 388 aa4.23□□□□□ -1.73
HMGB1P14-201ENST00000557424 TNK2Q07912 1038 aa4.23□□□□□ -1.73
HMGB1P14-201ENST00000557424 ARTNQ5T4W7 220 aa4.23□□□□□ -1.73
HMGB1P14-201ENST00000557424 KIAA1211LQ6NV74 962 aa4.23□□□□□ -1.73
HMGB1P14-201ENST00000557424 SLC23A3Q6PIS1 610 aa4.23□□□□□ -1.73
HMGB1P14-201ENST00000557424 SPPL2CQ8IUH8 684 aa4.23□□□□□ -1.73
HMGB1P14-201ENST00000557424 KSR1Q8IVT5 923 aa4.23□□□□□ -1.73
HMGB1P14-201ENST00000557424 WDR75Q8IWA0 830 aaKnown RBP4.23□□□□□ -1.73
HMGB1P14-201ENST00000557424 SMC5Q8IY18 1101 aa4.23□□□□□ -1.73
HMGB1P14-201ENST00000557424 PLD6Q8N2A8 252 aaKnown RBP4.23□□□□□ -1.73
HMGB1P14-201ENST00000557424 OXR1Q8N573 874 aa4.23□□□□□ -1.73
HMGB1P14-201ENST00000557424 UBR7Q8N806 425 aa4.23□□□□□ -1.73
HMGB1P14-201ENST00000557424 FAM181AQ8N9Y4 354 aa4.23□□□□□ -1.73
HMGB1P14-201ENST00000557424 RCC1LQ96I51 464 aaKnown RBP4.23□□□□□ -1.73
HMGB1P14-201ENST00000557424 HEXIM2Q96MH2 286 aaKnown RBP4.23□□□□□ -1.73
HMGB1P14-201ENST00000557424 FEZ1Q99689 392 aa4.23□□□□□ -1.73
HMGB1P14-201ENST00000557424 TYW1Q9NV66 732 aaKnown RBP4.23□□□□□ -1.73
HMGB1P14-201ENST00000557424 KCNQ2O43526 872 aa4.22□□□□□ -1.73
HMGB1P14-201ENST00000557424 GJB6O95452 261 aa4.22□□□□□ -1.73
HMGB1P14-201ENST00000557424 ACRP10323 421 aa4.22□□□□□ -1.73
HMGB1P14-201ENST00000557424 CD247P20963 164 aa4.22□□□□□ -1.73
HMGB1P14-201ENST00000557424 BMP8BP34820 402 aa4.22□□□□□ -1.73
HMGB1P14-201ENST00000557424 AMPD2Q01433 879 aa4.22□□□□□ -1.73
HMGB1P14-201ENST00000557424 RASGRF1Q13972 1273 aa4.22□□□□□ -1.73
HMGB1P14-201ENST00000557424 PLCL1Q15111 1095 aa4.22□□□□□ -1.73
HMGB1P14-201ENST00000557424 NKPD1Q17RQ9 610 aa4.22□□□□□ -1.73
HMGB1P14-201ENST00000557424 C2orf27AQ580R0 203 aa4.22□□□□□ -1.73
HMGB1P14-201ENST00000557424 FAM214BQ7L5A3 538 aa4.22□□□□□ -1.73
HMGB1P14-201ENST00000557424 DDX42Q86XP3 938 aaKnown RBP eCLIP4.22□□□□□ -1.73
HMGB1P14-201ENST00000557424 TMEM192Q8IY95 271 aa4.22□□□□□ -1.73
HMGB1P14-201ENST00000557424 NAT16Q8N8M0 369 aa4.22□□□□□ -1.73
HMGB1P14-201ENST00000557424 PI4K2BQ8TCG2 481 aa4.22□□□□□ -1.73
HMGB1P14-201ENST00000557424 BCL7CQ8WUZ0 217 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P14-201ENST00000557424 UBE2FQ969M7 185 aa4.22□□□□□ -1.73
HMGB1P14-201ENST00000557424 HSPA12BQ96MM6 686 aa4.22□□□□□ -1.73
HMGB1P14-201ENST00000557424 RPS6KC1Q96S38 1066 aa4.22□□□□□ -1.73
HMGB1P14-201ENST00000557424 ANTXR1Q9H6X2 564 aa4.22□□□□□ -1.73
HMGB1P14-201ENST00000557424 GP6Q9HCN6 339 aa4.22□□□□□ -1.73
HMGB1P14-201ENST00000557424 CHST12Q9NRB3 414 aa4.22□□□□□ -1.73
HMGB1P14-201ENST00000557424 ZSWIM5Q9P217 1185 aa4.22□□□□□ -1.73
HMGB1P14-201ENST00000557424 CCDC39Q9UFE4 941 aa4.22□□□□□ -1.73
HMGB1P14-201ENST00000557424 ATP8A1Q9Y2Q0 1164 aa4.22□□□□□ -1.73
HMGB1P14-201ENST00000557424 ST14Q9Y5Y6 855 aa4.22□□□□□ -1.73
HMGB1P14-201ENST00000557424 KDM2BQ8NHM5 1336 aa4.21□□□□□ -1.73
HMGB1P14-201ENST00000557424 CCDC163A0A0D9SF12 145 aa4.21□□□□□ -1.74
HMGB1P14-201ENST00000557424 FAM86C2PA6NEL3 165 aa4.21□□□□□ -1.74
HMGB1P14-201ENST00000557424 IRS4O14654 1257 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P14-201ENST00000557424 CREB3O43889 395 aa4.21□□□□□ -1.74
HMGB1P14-201ENST00000557424 PPFIA4O75335 1185 aa4.21□□□□□ -1.74
HMGB1P14-201ENST00000557424 SRFP11831 508 aa4.21□□□□□ -1.74
HMGB1P14-201ENST00000557424 NAT1P18440 290 aa4.21□□□□□ -1.74
HMGB1P14-201ENST00000557424 ZP2Q05996 745 aa4.21□□□□□ -1.74
HMGB1P14-201ENST00000557424 EGR3Q06889 387 aa4.21□□□□□ -1.74
HMGB1P14-201ENST00000557424 CBX2Q14781 532 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P14-201ENST00000557424 SV2CQ496J9 727 aa4.21□□□□□ -1.74
HMGB1P14-201ENST00000557424 MTERF2Q49AM1 385 aa4.21□□□□□ -1.74
HMGB1P14-201ENST00000557424 EEF1DP3Q658K8 133 aa4.21□□□□□ -1.74
HMGB1P14-201ENST00000557424 OLFML2BQ68BL8 750 aa4.21□□□□□ -1.74
HMGB1P14-201ENST00000557424 MRM1Q6IN84 353 aaKnown RBP4.21□□□□□ -1.74
HMGB1P14-201ENST00000557424 C6orf15Q6UXA7 325 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P14-201ENST00000557424 RUFY4Q6ZNE9 571 aa4.21□□□□□ -1.74
HMGB1P14-201ENST00000557424 KRT26Q7Z3Y9 468 aa4.21□□□□□ -1.74
HMGB1P14-201ENST00000557424 CREG2Q8IUH2 290 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms