RNA–Protein interactions for RNA: ENST00000556886.1

LINC00871-204, long intergenic non-protein coding RNA 871, humanhuman

TSL 3 BASIC

Gene LINC00871, Length 866 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-204ENST00000556886 GTF2F1P35269 517 aaKnown RBP eCLIP9.16□□□□□ -0.94
LINC00871-204ENST00000556886 C6orf15Q6UXA7 325 aaPredicted RBP9.16□□□□□ -0.94
LINC00871-204ENST00000556886 MICAL1Q8TDZ2 1067 aa9.16□□□□□ -0.94
LINC00871-204ENST00000556886 DHX38Q92620 1227 aaKnown RBP9.16□□□□□ -0.94
LINC00871-204ENST00000556886 GP6Q9HCN6 339 aa9.16□□□□□ -0.94
LINC00871-204ENST00000556886 CHST7Q9NS84 486 aa9.16□□□□□ -0.94
LINC00871-204ENST00000556886 ADAMTS6Q9UKP5 1117 aa9.16□□□□□ -0.94
LINC00871-204ENST00000556886 R3HCC1Q9Y3T6 440 aaKnown RBP9.16□□□□□ -0.94
LINC00871-204ENST00000556886 KLF4O43474 513 aa9.15□□□□□ -0.94
LINC00871-204ENST00000556886 EPHX1P07099 455 aa9.15□□□□□ -0.94
LINC00871-204ENST00000556886 LTKP29376 864 aa9.15□□□□□ -0.94
LINC00871-204ENST00000556886 SF3A1Q15459 793 aaKnown RBP9.15□□□□□ -0.94
LINC00871-204ENST00000556886 DAGLBQ8NCG7 672 aa9.15□□□□□ -0.94
LINC00871-204ENST00000556886 SREK1Q8WXA9 508 aaKnown RBP9.15□□□□□ -0.94
LINC00871-204ENST00000556886 BRF1Q92994 677 aa9.15□□□□□ -0.94
LINC00871-204ENST00000556886 TCTN2Q96GX1 697 aa9.15□□□□□ -0.94
LINC00871-204ENST00000556886 KLHL25Q9H0H3 589 aa9.15□□□□□ -0.94
LINC00871-204ENST00000556886 LMCD1Q9NZU5 365 aa9.15□□□□□ -0.94
LINC00871-204ENST00000556886 PCDHA11Q9Y5I1 949 aa9.15□□□□□ -0.94
LINC00871-204ENST00000556886 ITSN2Q9NZM3 1697 aa9.15□□□□□ -0.94
LINC00871-204ENST00000556886 CENPBP07199 599 aaPredicted RBP9.14□□□□□ -0.95
LINC00871-204ENST00000556886 ZNF445P59923 1031 aa9.14□□□□□ -0.95
LINC00871-204ENST00000556886 EGR3Q06889 387 aa9.14□□□□□ -0.95
LINC00871-204ENST00000556886 LCE3BQ5TA77 95 aa9.14□□□□□ -0.95
LINC00871-204ENST00000556886 HEATR6Q6AI08 1181 aaKnown RBP9.14□□□□□ -0.95
LINC00871-204ENST00000556886 ZNF655Q8N720 491 aaPredicted RBP9.14□□□□□ -0.95
LINC00871-204ENST00000556886 CELF2-AS1Q8N7Q2 184 aa9.14□□□□□ -0.95
LINC00871-204ENST00000556886 PRR13Q9NZ81 148 aa9.14□□□□□ -0.95
LINC00871-204ENST00000556886 DNMT1P26358 1616 aaKnown RBP9.13□□□□□ -0.95
LINC00871-204ENST00000556886 CTSKP43235 329 aa9.13□□□□□ -0.95
LINC00871-204ENST00000556886 NCAPHQ15003 741 aa9.13□□□□□ -0.95
LINC00871-204ENST00000556886 TCEAL1Q15170 157 aa9.13□□□□□ -0.95
LINC00871-204ENST00000556886 FXNQ16595 210 aa9.13□□□□□ -0.95
LINC00871-204ENST00000556886 ZNF792Q3KQV3 632 aa9.13□□□□□ -0.95
LINC00871-204ENST00000556886 NOL9Q5SY16 702 aaKnown RBP9.13□□□□□ -0.95
LINC00871-204ENST00000556886 SLC23A3Q6PIS1 610 aa9.13□□□□□ -0.95
LINC00871-204ENST00000556886 FAM178BQ8IXR5 827 aa9.13□□□□□ -0.95
LINC00871-204ENST00000556886 PI4K2BQ8TCG2 481 aa9.13□□□□□ -0.95
LINC00871-204ENST00000556886 FGD4Q96M96 766 aa9.13□□□□□ -0.95
LINC00871-204ENST00000556886 MBNL3Q9NUK0 354 aaKnown RBP9.13□□□□□ -0.95
LINC00871-204ENST00000556886 PPP1R1BQ9UD71 204 aaPredicted RBP9.13□□□□□ -0.95
LINC00871-204ENST00000556886 SUSD2Q9UGT4 822 aa9.13□□□□□ -0.95
LINC00871-204ENST00000556886 PLB1Q6P1J6 1458 aa9.13□□□□□ -0.95
LINC00871-204ENST00000556886 DAPK1P53355 1430 aa9.13□□□□□ -0.95
LINC00871-204ENST00000556886 PLEKHD1A6NEE1 506 aa9.12□□□□□ -0.95
LINC00871-204ENST00000556886 BTBD11A6QL63 1104 aa9.12□□□□□ -0.95
LINC00871-204ENST00000556886 DDAH1O94760 285 aa9.12□□□□□ -0.95
LINC00871-204ENST00000556886 RNASE1P07998 156 aaKnown RBP9.12□□□□□ -0.95
LINC00871-204ENST00000556886 ITGA4P13612 1032 aa9.12□□□□□ -0.95
LINC00871-204ENST00000556886 CKAP2LQ8IYA6 745 aa9.12□□□□□ -0.95
LINC00871-204ENST00000556886 ADCY4Q8NFM4 1077 aa9.12□□□□□ -0.95
LINC00871-204ENST00000556886 DSCC1Q9BVC3 393 aa9.12□□□□□ -0.95
LINC00871-204ENST00000556886 ST7Q9NRC1 585 aa9.12□□□□□ -0.95
LINC00871-204ENST00000556886 SHROOM2Q13796 1616 aa9.12□□□□□ -0.95
LINC00871-204ENST00000556886 GPATCH8Q9UKJ3 1502 aaKnown RBP9.11□□□□□ -0.95
LINC00871-204ENST00000556886 GJB6O95452 261 aa9.11□□□□□ -0.95
LINC00871-204ENST00000556886 RAB33AQ14088 237 aa9.11□□□□□ -0.95
LINC00871-204ENST00000556886 MRM1Q6IN84 353 aaKnown RBP9.11□□□□□ -0.95
LINC00871-204ENST00000556886 CRTC3Q6UUV7 619 aa9.11□□□□□ -0.95
LINC00871-204ENST00000556886 FIBCD1Q8N539 461 aa9.11□□□□□ -0.95
LINC00871-204ENST00000556886 USHBP1Q8N6Y0 703 aa9.11□□□□□ -0.95
LINC00871-204ENST00000556886 ARMC5Q96C12 935 aa9.11□□□□□ -0.95
LINC00871-204ENST00000556886 FOXP3Q9BZS1 431 aa9.11□□□□□ -0.95
LINC00871-204ENST00000556886 GBP3Q9H0R5 595 aa9.11□□□□□ -0.95
LINC00871-204ENST00000556886 NOL6Q9H6R4 1146 aaKnown RBP9.11□□□□□ -0.95
LINC00871-204ENST00000556886 WHRNQ9P202 907 aa9.11□□□□□ -0.95
LINC00871-204ENST00000556886 FHOD1Q9Y613 1164 aa9.11□□□□□ -0.95
LINC00871-204ENST00000556886 ABCC5O15440 1437 aa9.11□□□□□ -0.95
LINC00871-204ENST00000556886 PTPRGP23470 1445 aa9.11□□□□□ -0.95
LINC00871-204ENST00000556886 ERCC6L2Q5T890 1561 aa9.11□□□□□ -0.95
LINC00871-204ENST00000556886 ATP10BO94823 1461 aa9.1□□□□□ -0.95
LINC00871-204ENST00000556886 ADGRL2O95490 1459 aa9.1□□□□□ -0.95
LINC00871-204ENST00000556886 TEKQ02763 1124 aa9.1□□□□□ -0.95
LINC00871-204ENST00000556886 DDR2Q16832 855 aa9.1□□□□□ -0.95
LINC00871-204ENST00000556886 ADAT2Q7Z6V5 191 aaKnown RBP9.1□□□□□ -0.95
LINC00871-204ENST00000556886 ALPK1Q96QP1 1244 aa9.1□□□□□ -0.95
LINC00871-204ENST00000556886 TRIM55Q9BYV6 548 aa9.1□□□□□ -0.95
LINC00871-204ENST00000556886 SLAMF8Q9P0V8 285 aa9.1□□□□□ -0.95
LINC00871-204ENST00000556886 TCFL5Q9UL49 500 aa9.1□□□□□ -0.95
LINC00871-204ENST00000556886 PRG4Q92954 1404 aaPredicted RBP9.1□□□□□ -0.95
LINC00871-204ENST00000556886 RIMBP3CA6NJZ7 1639 aa9.09□□□□□ -0.95
LINC00871-204ENST00000556886 RIMBP3BA6NNM3 1639 aa9.09□□□□□ -0.95
LINC00871-204ENST00000556886 RIMBP3Q9UFD9 1639 aa9.09□□□□□ -0.95
LINC00871-204ENST00000556886 DNAJC25-GNG10A0A024R161 153 aa9.09□□□□□ -0.95
LINC00871-204ENST00000556886 ANKRD34BA5PLL1 514 aa9.09□□□□□ -0.95
LINC00871-204ENST00000556886 H0Y8X5 98 aa9.09□□□□□ -0.95
LINC00871-204ENST00000556886 SYPP08247 313 aa9.09□□□□□ -0.95
LINC00871-204ENST00000556886 PCBP3P57721 371 aaKnown RBP9.09□□□□□ -0.95
LINC00871-204ENST00000556886 RALGPS1Q5JS13 557 aa9.09□□□□□ -0.95
LINC00871-204ENST00000556886 CYB5RLQ6IPT4 315 aa9.09□□□□□ -0.95
LINC00871-204ENST00000556886 LINC00116Q8NCU8 138 aa9.09□□□□□ -0.95
LINC00871-204ENST00000556886 LRRN4CLQ8ND94 238 aa9.09□□□□□ -0.95
LINC00871-204ENST00000556886 SIN3AQ96ST3 1273 aa9.09□□□□□ -0.95
LINC00871-204ENST00000556886 HIRIP3Q9BW71 556 aaPredicted RBP9.09□□□□□ -0.95
LINC00871-204ENST00000556886 RC3H2Q9HBD1 1191 aaKnown RBP9.09□□□□□ -0.95
LINC00871-204ENST00000556886 APEX2Q9UBZ4 518 aa9.09□□□□□ -0.95
LINC00871-204ENST00000556886 CFDP1Q9UEE9 299 aaPredicted RBP9.09□□□□□ -0.95
LINC00871-204ENST00000556886 ADGRE2Q9UHX3 823 aa9.09□□□□□ -0.95
LINC00871-204ENST00000556886 TONSLQ96HA7 1378 aa9.09□□□□□ -0.95
LINC00871-204ENST00000556886 KIF14Q15058 1648 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms