RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 ZSWIM5Q9P217 1185 aa6.56□□□□□ -1.36
ATXN3-243ENST00000556671 CORINQ9Y5Q5 1042 aa6.56□□□□□ -1.36
ATXN3-243ENST00000556671 PIK3C2GO75747 1445 aa6.56□□□□□ -1.36
ATXN3-243ENST00000556671 KIAA1210Q9ULL0 1709 aa6.56□□□□□ -1.36
ATXN3-243ENST00000556671 LRPPRCP42704 1394 aaKnown RBP6.56□□□□□ -1.36
ATXN3-243ENST00000556671 MYOM2P54296 1465 aa6.55□□□□□ -1.36
ATXN3-243ENST00000556671 FAM221AA4D161 298 aa6.55□□□□□ -1.36
ATXN3-243ENST00000556671 LRRC10BA6NIK2 292 aa6.55□□□□□ -1.36
ATXN3-243ENST00000556671 GLI1P08151 1106 aa6.55□□□□□ -1.36
ATXN3-243ENST00000556671 LMNB2Q03252 620 aa6.55□□□□□ -1.36
ATXN3-243ENST00000556671 CAMK2GQ13555 558 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-243ENST00000556671 ZNF124Q15973 351 aa6.55□□□□□ -1.36
ATXN3-243ENST00000556671 TMEM201Q5SNT2 666 aa6.55□□□□□ -1.36
ATXN3-243ENST00000556671 MEX3CQ5U5Q3 659 aaKnown RBP6.55□□□□□ -1.36
ATXN3-243ENST00000556671 DIEXFQ68CQ4 756 aaKnown RBP6.55□□□□□ -1.36
ATXN3-243ENST00000556671 PPP1R13LQ8WUF5 828 aa6.55□□□□□ -1.36
ATXN3-243ENST00000556671 CCDC120Q96HB5 630 aa6.55□□□□□ -1.36
ATXN3-243ENST00000556671 KIRREL1Q96J84 757 aa6.55□□□□□ -1.36
ATXN3-243ENST00000556671 ALPK1Q96QP1 1244 aa6.55□□□□□ -1.36
ATXN3-243ENST00000556671 CEP131Q9UPN4 1083 aa6.55□□□□□ -1.36
ATXN3-243ENST00000556671 ARHGEF28Q8N1W1 1705 aaKnown RBP6.55□□□□□ -1.36
ATXN3-243ENST00000556671 PLEKHH1Q9ULM0 1364 aa6.55□□□□□ -1.36
ATXN3-243ENST00000556671 SORBS3O60504 671 aa6.54□□□□□ -1.36
ATXN3-243ENST00000556671 PF4P02776 101 aa6.54□□□□□ -1.36
ATXN3-243ENST00000556671 ESR1P03372 595 aa6.54□□□□□ -1.36
ATXN3-243ENST00000556671 PLCG1P19174 1290 aa6.54□□□□□ -1.36
ATXN3-243ENST00000556671 MLANAQ16655 118 aa6.54□□□□□ -1.36
ATXN3-243ENST00000556671 NBPF8Q3BBV2 869 aa6.54□□□□□ -1.36
ATXN3-243ENST00000556671 TMPRSS7Q7RTY8 843 aa6.54□□□□□ -1.36
ATXN3-243ENST00000556671 KSR1Q8IVT5 923 aa6.54□□□□□ -1.36
ATXN3-243ENST00000556671 PMFBP1Q8TBY8 1022 aa6.54□□□□□ -1.36
ATXN3-243ENST00000556671 CYB5D2Q8WUJ1 264 aa6.54□□□□□ -1.36
ATXN3-243ENST00000556671 GATAD2BQ8WXI9 593 aa6.54□□□□□ -1.36
ATXN3-243ENST00000556671 LIN37Q96GY3 246 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-243ENST00000556671 FAM84AQ96KN4 292 aa6.54□□□□□ -1.36
ATXN3-243ENST00000556671 RHOVQ96L33 236 aa6.54□□□□□ -1.36
ATXN3-243ENST00000556671 SLC38A3Q99624 504 aa6.54□□□□□ -1.36
ATXN3-243ENST00000556671 CARD11Q9BXL7 1154 aa6.54□□□□□ -1.36
ATXN3-243ENST00000556671 ABCC11Q96J66 1382 aa6.54□□□□□ -1.36
ATXN3-243ENST00000556671 DISP3Q9P2K9 1392 aa6.54□□□□□ -1.36
ATXN3-243ENST00000556671 TRPM1Q7Z4N2 1603 aa6.54□□□□□ -1.36
ATXN3-243ENST00000556671 FMN2Q9NZ56 1722 aa6.53□□□□□ -1.36
ATXN3-243ENST00000556671 NCOA3Q9Y6Q9 1424 aa6.53□□□□□ -1.36
ATXN3-243ENST00000556671 QRICH2Q9H0J4 1663 aa6.53□□□□□ -1.36
ATXN3-243ENST00000556671 DBX1A6NMT0 343 aa6.53□□□□□ -1.36
ATXN3-243ENST00000556671 UPK3BL1B0FP48 263 aa6.53□□□□□ -1.36
ATXN3-243ENST00000556671 UPK3BL2E5RIL1 263 aa6.53□□□□□ -1.36
ATXN3-243ENST00000556671 F6X3S4 739 aa6.53□□□□□ -1.36
ATXN3-243ENST00000556671 BPNT1O95861 308 aa6.53□□□□□ -1.36
ATXN3-243ENST00000556671 F13A1P00488 732 aa6.53□□□□□ -1.36
ATXN3-243ENST00000556671 TAGLNQ01995 201 aaKnown RBP6.53□□□□□ -1.36
ATXN3-243ENST00000556671 BRINP3Q76B58 766 aa6.53□□□□□ -1.36
ATXN3-243ENST00000556671 FAM13CQ8NE31 585 aa6.53□□□□□ -1.36
ATXN3-243ENST00000556671 BHLHE22Q8NFJ8 381 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-243ENST00000556671 RSRP1Q9BUV0 290 aa6.53□□□□□ -1.36
ATXN3-243ENST00000556671 CDK19Q9BWU1 502 aa6.53□□□□□ -1.36
ATXN3-243ENST00000556671 DUSP15Q9H1R2 295 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-243ENST00000556671 ROCK2O75116 1388 aaKnown RBP6.53□□□□□ -1.36
ATXN3-243ENST00000556671 ARID1BQ8NFD5 2236 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-243ENST00000556671 PRR36Q9H6K5 1346 aa6.52□□□□□ -1.37
ATXN3-243ENST00000556671 FAM135BQ49AJ0 1406 aa6.52□□□□□ -1.37
ATXN3-243ENST00000556671 ADGRL3Q9HAR2 1447 aa6.52□□□□□ -1.37
ATXN3-243ENST00000556671 ASXL1Q8IXJ9 1541 aa6.52□□□□□ -1.37
ATXN3-243ENST00000556671 SRFP11831 508 aa6.52□□□□□ -1.37
ATXN3-243ENST00000556671 ERCC3P19447 782 aa6.52□□□□□ -1.37
ATXN3-243ENST00000556671 PKN1Q16512 942 aa6.52□□□□□ -1.37
ATXN3-243ENST00000556671 TMEM67Q5HYA8 995 aa6.52□□□□□ -1.37
ATXN3-243ENST00000556671 NGDNQ8NEJ9 315 aaKnown RBP6.52□□□□□ -1.37
ATXN3-243ENST00000556671 TMEM74Q96NL1 305 aa6.52□□□□□ -1.37
ATXN3-243ENST00000556671 GPR62Q9BZJ7 368 aa6.52□□□□□ -1.37
ATXN3-243ENST00000556671 SLAMF8Q9P0V8 285 aa6.52□□□□□ -1.37
ATXN3-243ENST00000556671 NRXN1Q9ULB1 1477 aa6.52□□□□□ -1.37
ATXN3-243ENST00000556671 PRAG1Q86YV5 1406 aa6.51□□□□□ -1.37
ATXN3-243ENST00000556671 ITSN1Q15811 1721 aa6.51□□□□□ -1.37
ATXN3-243ENST00000556671 WASH4PA8MWX3 477 aa6.51□□□□□ -1.37
ATXN3-243ENST00000556671 YARSP54577 528 aaKnown RBP6.51□□□□□ -1.37
ATXN3-243ENST00000556671 PWP1Q13610 501 aa6.51□□□□□ -1.37
ATXN3-243ENST00000556671 GAB4Q2WGN9 574 aa6.51□□□□□ -1.37
ATXN3-243ENST00000556671 RALGPS1Q5JS13 557 aa6.51□□□□□ -1.37
ATXN3-243ENST00000556671 KRT28Q7Z3Y7 464 aa6.51□□□□□ -1.37
ATXN3-243ENST00000556671 RELL1Q8IUW5 271 aa6.51□□□□□ -1.37
ATXN3-243ENST00000556671 SLFN12Q8IYM2 578 aa6.51□□□□□ -1.37
ATXN3-243ENST00000556671 LRRC59Q96AG4 307 aaKnown RBP6.51□□□□□ -1.37
ATXN3-243ENST00000556671 POLR3GLQ9BT43 218 aa6.51□□□□□ -1.37
ATXN3-243ENST00000556671 TRIT1Q9H3H1 467 aaKnown RBP6.51□□□□□ -1.37
ATXN3-243ENST00000556671 MRS2Q9HD23 443 aa6.51□□□□□ -1.37
ATXN3-243ENST00000556671 VTI1BQ9UEU0 232 aa6.51□□□□□ -1.37
ATXN3-243ENST00000556671 TMEM59LQ9UK28 342 aa6.51□□□□□ -1.37
ATXN3-243ENST00000556671 KAT6BQ8WYB5 2073 aa6.51□□□□□ -1.37
ATXN3-243ENST00000556671 CENPJQ9HC77 1338 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-243ENST00000556671 MST1RQ04912 1400 aa6.5□□□□□ -1.37
ATXN3-243ENST00000556671 PTCH1Q13635 1447 aa6.5□□□□□ -1.37
ATXN3-243ENST00000556671 C1orf167Q5SNV9 1468 aa6.5□□□□□ -1.37
ATXN3-243ENST00000556671 DNAJC25-GNG10A0A024R161 153 aa6.5□□□□□ -1.37
ATXN3-243ENST00000556671 TPP2P29144 1249 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-243ENST00000556671 GBP2P32456 591 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-243ENST00000556671 TTC6Q86TZ1 520 aa6.5□□□□□ -1.37
ATXN3-243ENST00000556671 CREG2Q8IUH2 290 aa6.5□□□□□ -1.37
ATXN3-243ENST00000556671 DTWD2Q8NBA8 298 aa6.5□□□□□ -1.37
ATXN3-243ENST00000556671 RNF141Q8WVD5 230 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms