RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 DGKZQ13574 1117 aa13.04□□□□□ -0.32
FOXN3-212ENST00000556541 PFKFB3Q16875 520 aaPredicted RBP13.04□□□□□ -0.32
FOXN3-212ENST00000556541 TKFCQ3LXA3 575 aa13.04□□□□□ -0.32
FOXN3-212ENST00000556541 NOL8Q76FK4 1167 aaKnown RBP13.04□□□□□ -0.32
FOXN3-212ENST00000556541 CCDC144CPQ8IYA2 1237 aa13.04□□□□□ -0.32
FOXN3-212ENST00000556541 SAMD3Q8N6K7 520 aa13.04□□□□□ -0.32
FOXN3-212ENST00000556541 MORF4L1Q9UBU8 362 aa13.04□□□□□ -0.32
FOXN3-212ENST00000556541 ESYT2A0FGR8 921 aa13.03□□□□□ -0.32
FOXN3-212ENST00000556541 IGF2BP3O00425 579 aaKnown RBP eCLIP13.03□□□□□ -0.32
FOXN3-212ENST00000556541 ZBED4O75132 1171 aa13.03□□□□□ -0.32
FOXN3-212ENST00000556541 ICAM1P05362 532 aa13.03□□□□□ -0.32
FOXN3-212ENST00000556541 VEGFBP49765 207 aa13.03□□□□□ -0.32
FOXN3-212ENST00000556541 AKAP17AQ02040 695 aaKnown RBP13.03□□□□□ -0.32
FOXN3-212ENST00000556541 GHRHRQ02643 423 aa13.03□□□□□ -0.32
FOXN3-212ENST00000556541 PKN1Q16512 942 aa13.03□□□□□ -0.32
FOXN3-212ENST00000556541 CDC37Q16543 378 aaPredicted RBP13.03□□□□□ -0.32
FOXN3-212ENST00000556541 NOM1Q5C9Z4 860 aaKnown RBP13.03□□□□□ -0.32
FOXN3-212ENST00000556541 RAB11FIP4Q86YS3 637 aa13.03□□□□□ -0.32
FOXN3-212ENST00000556541 FAM43AQ8N2R8 423 aa13.03□□□□□ -0.32
FOXN3-212ENST00000556541 UBA5Q9GZZ9 404 aa13.03□□□□□ -0.32
FOXN3-212ENST00000556541 CWC22Q9HCG8 908 aaKnown RBP13.03□□□□□ -0.32
FOXN3-212ENST00000556541 FBXO28Q9NVF7 368 aa13.03□□□□□ -0.32
FOXN3-212ENST00000556541 SEC63Q9UGP8 760 aaKnown RBP13.03□□□□□ -0.32
FOXN3-212ENST00000556541 ZNF214Q9UL59 606 aaPredicted RBP13.03□□□□□ -0.32
FOXN3-212ENST00000556541 MTMR7Q9Y216 660 aa13.03□□□□□ -0.32
FOXN3-212ENST00000556541 ZNF236Q9UL36 1845 aa13.02□□□□□ -0.32
FOXN3-212ENST00000556541 CA12O43570 354 aa13.02□□□□□ -0.33
FOXN3-212ENST00000556541 SCG2P13521 617 aa13.02□□□□□ -0.33
FOXN3-212ENST00000556541 FDPSP14324 419 aaKnown RBP13.02□□□□□ -0.33
FOXN3-212ENST00000556541 SLC16A2P36021 539 aa13.02□□□□□ -0.33
FOXN3-212ENST00000556541 IKQ13123 557 aaPredicted RBP13.02□□□□□ -0.33
FOXN3-212ENST00000556541 FAM110CQ1W6H9 321 aa13.02□□□□□ -0.33
FOXN3-212ENST00000556541 GALNT17Q6IS24 598 aa13.02□□□□□ -0.33
FOXN3-212ENST00000556541 SHCBP1Q8NEM2 672 aa13.02□□□□□ -0.33
FOXN3-212ENST00000556541 CCDC12Q8WUD4 166 aaPredicted RBP13.02□□□□□ -0.33
FOXN3-212ENST00000556541 KIFC2Q96AC6 838 aa13.02□□□□□ -0.33
FOXN3-212ENST00000556541 ATG4CQ96DT6 458 aa13.02□□□□□ -0.33
FOXN3-212ENST00000556541 P2RX7Q99572 595 aaKnown RBP13.02□□□□□ -0.33
FOXN3-212ENST00000556541 AMNQ9BXJ7 453 aa13.02□□□□□ -0.33
FOXN3-212ENST00000556541 TEX13BQ9BXU2 312 aa13.02□□□□□ -0.33
FOXN3-212ENST00000556541 GLT8D2Q9H1C3 349 aa13.02□□□□□ -0.33
FOXN3-212ENST00000556541 SAGE1Q9NXZ1 904 aa13.02□□□□□ -0.33
FOXN3-212ENST00000556541 BARHL2Q9NY43 387 aa13.02□□□□□ -0.33
FOXN3-212ENST00000556541 MAP3K20Q9NYL2 800 aaKnown RBP13.02□□□□□ -0.33
FOXN3-212ENST00000556541 ORC3Q9UBD5 711 aaPredicted RBP13.02□□□□□ -0.33
FOXN3-212ENST00000556541 SMC3Q9UQE7 1217 aa13.02□□□□□ -0.33
FOXN3-212ENST00000556541 V9GY48 417 aaPredicted RBP13.02□□□□□ -0.33
FOXN3-212ENST00000556541 ZNF536O15090 1300 aa13.02□□□□□ -0.33
FOXN3-212ENST00000556541 SMCHD1A6NHR9 2005 aa13.01□□□□□ -0.33
FOXN3-212ENST00000556541 TLR2O60603 784 aa13.01□□□□□ -0.33
FOXN3-212ENST00000556541 SLC25A27O95847 323 aa13.01□□□□□ -0.33
FOXN3-212ENST00000556541 XBP1P17861 261 aa13.01□□□□□ -0.33
FOXN3-212ENST00000556541 PDCP20941 246 aa13.01□□□□□ -0.33
FOXN3-212ENST00000556541 MKRN3Q13064 507 aaKnown RBP13.01□□□□□ -0.33
FOXN3-212ENST00000556541 QRICH1Q2TAL8 776 aa13.01□□□□□ -0.33
FOXN3-212ENST00000556541 FBXO11Q86XK2 927 aa13.01□□□□□ -0.33
FOXN3-212ENST00000556541 RIOX2Q8IUF8 465 aa13.01□□□□□ -0.33
FOXN3-212ENST00000556541 CCDC148Q8NFR7 591 aa13.01□□□□□ -0.33
FOXN3-212ENST00000556541 PIGSQ96S52 555 aa13.01□□□□□ -0.33
FOXN3-212ENST00000556541 SLC26A6Q9BXS9 759 aa13.01□□□□□ -0.33
FOXN3-212ENST00000556541 ZFYVE28Q9HCC9 887 aa13.01□□□□□ -0.33
FOXN3-212ENST00000556541 ABCB11O95342 1321 aa13.01□□□□□ -0.33
FOXN3-212ENST00000556541 MGAMO43451 1857 aa13□□□□□ -0.33
FOXN3-212ENST00000556541 CNMDO75829 334 aa13□□□□□ -0.33
FOXN3-212ENST00000556541 HSPA1AP0DMV8 641 aaKnown RBP13□□□□□ -0.33
FOXN3-212ENST00000556541 HSPA1BP0DMV9 641 aaKnown RBP13□□□□□ -0.33
FOXN3-212ENST00000556541 BCRP11274 1271 aa13□□□□□ -0.33
FOXN3-212ENST00000556541 TMEM132BQ14DG7 1078 aa13□□□□□ -0.33
FOXN3-212ENST00000556541 TAF1CQ15572 869 aaPredicted RBP13□□□□□ -0.33
FOXN3-212ENST00000556541 MCTP2Q6DN12 878 aa13□□□□□ -0.33
FOXN3-212ENST00000556541 POTEEQ6S8J3 1075 aa13□□□□□ -0.33
FOXN3-212ENST00000556541 PAXIP1Q6ZW49 1069 aaPredicted RBP13□□□□□ -0.33
FOXN3-212ENST00000556541 DAGLBQ8NCG7 672 aa13□□□□□ -0.33
FOXN3-212ENST00000556541 PHKBQ93100 1093 aa13□□□□□ -0.33
FOXN3-212ENST00000556541 CPVLQ9H3G5 476 aa13□□□□□ -0.33
FOXN3-212ENST00000556541 RBPJLQ9UBG7 517 aa13□□□□□ -0.33
FOXN3-212ENST00000556541 FBXO40Q9UH90 709 aa13□□□□□ -0.33
FOXN3-212ENST00000556541 ISY1Q9ULR0 285 aaKnown RBP13□□□□□ -0.33
FOXN3-212ENST00000556541 JAK2O60674 1132 aa12.99□□□□□ -0.33
FOXN3-212ENST00000556541 PPP1R11O60927 126 aaPredicted RBP12.99□□□□□ -0.33
FOXN3-212ENST00000556541 AOC2O75106 756 aa12.99□□□□□ -0.33
FOXN3-212ENST00000556541 GJB2P29033 226 aa12.99□□□□□ -0.33
FOXN3-212ENST00000556541 STAT3P40763 770 aa12.99□□□□□ -0.33
FOXN3-212ENST00000556541 ERVK-9P63128 1117 aa12.99□□□□□ -0.33
FOXN3-212ENST00000556541 ERVK-24P63145 666 aa12.99□□□□□ -0.33
FOXN3-212ENST00000556541 CCNA1P78396 465 aa12.99□□□□□ -0.33
FOXN3-212ENST00000556541 C17orf99Q6UX52 265 aa12.99□□□□□ -0.33
FOXN3-212ENST00000556541 CMTR1Q8N1G2 835 aaKnown RBP12.99□□□□□ -0.33
FOXN3-212ENST00000556541 FAM184AQ8NB25 1140 aa12.99□□□□□ -0.33
FOXN3-212ENST00000556541 CHST13Q8NET6 341 aa12.99□□□□□ -0.33
FOXN3-212ENST00000556541 SMCR8Q8TEV9 937 aaPredicted RBP12.99□□□□□ -0.33
FOXN3-212ENST00000556541 IPO9Q96P70 1041 aaKnown RBP12.99□□□□□ -0.33
FOXN3-212ENST00000556541 ZIC5Q96T25 663 aa12.99□□□□□ -0.33
FOXN3-212ENST00000556541 SPATC1LQ9H0A9 340 aa12.99□□□□□ -0.33
FOXN3-212ENST00000556541 ZMYND12Q9H0C1 365 aa12.99□□□□□ -0.33
FOXN3-212ENST00000556541 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.99□□□□□ -0.33
FOXN3-212ENST00000556541 MRPL11Q9Y3B7 192 aaKnown RBP12.99□□□□□ -0.33
FOXN3-212ENST00000556541 CTDP1Q9Y5B0 961 aaPredicted RBP12.99□□□□□ -0.33
FOXN3-212ENST00000556541 ZNFX1Q9P2E3 1918 aaKnown RBP12.98□□□□□ -0.33
FOXN3-212ENST00000556541 PLXNB2O15031 1838 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms