RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 ITGAVP06756 1048 aa7.16□□□□□ -1.26
SCFD1-221ENST00000556534 GSTM1P09488 218 aa7.16□□□□□ -1.26
SCFD1-221ENST00000556534 FYB2Q5VWT5 728 aa7.16□□□□□ -1.26
SCFD1-221ENST00000556534 ANKS4BQ8N8V4 417 aa7.16□□□□□ -1.26
SCFD1-221ENST00000556534 DRC1Q96MC2 740 aa7.16□□□□□ -1.26
SCFD1-221ENST00000556534 DNAJC2Q99543 621 aaKnown RBP7.16□□□□□ -1.26
SCFD1-221ENST00000556534 SIRPGQ9P1W8 387 aa7.16□□□□□ -1.26
SCFD1-221ENST00000556534 PPP1R1BQ9UD71 204 aaPredicted RBP7.16□□□□□ -1.26
SCFD1-221ENST00000556534 ZMYM5Q9UJ78 669 aa7.16□□□□□ -1.26
SCFD1-221ENST00000556534 FITM1A5D6W6 292 aa7.15□□□□□ -1.26
SCFD1-221ENST00000556534 NOTOA8MTQ0 251 aa7.15□□□□□ -1.26
SCFD1-221ENST00000556534 AURKAO14965 403 aa7.15□□□□□ -1.26
SCFD1-221ENST00000556534 U2SURPO15042 1029 aaKnown RBP7.15□□□□□ -1.26
SCFD1-221ENST00000556534 FGF10O15520 208 aaPredicted RBP7.15□□□□□ -1.26
SCFD1-221ENST00000556534 VAMP4O75379 141 aa7.15□□□□□ -1.26
SCFD1-221ENST00000556534 EFEMP2O95967 443 aa7.15□□□□□ -1.26
SCFD1-221ENST00000556534 JUNBP17275 347 aaPredicted RBP7.15□□□□□ -1.26
SCFD1-221ENST00000556534 TAL1P17542 331 aaPredicted RBP7.15□□□□□ -1.26
SCFD1-221ENST00000556534 AMPD2Q01433 879 aa7.15□□□□□ -1.26
SCFD1-221ENST00000556534 RASA3Q14644 834 aa7.15□□□□□ -1.26
SCFD1-221ENST00000556534 NR0B2Q15466 257 aa7.15□□□□□ -1.26
SCFD1-221ENST00000556534 DPY19L1Q2PZI1 675 aa7.15□□□□□ -1.26
SCFD1-221ENST00000556534 SV2CQ496J9 727 aa7.15□□□□□ -1.26
SCFD1-221ENST00000556534 TIGD5Q53EQ6 642 aa7.15□□□□□ -1.26
SCFD1-221ENST00000556534 RCSD1Q6JBY9 416 aa7.15□□□□□ -1.26
SCFD1-221ENST00000556534 POMZP3Q6PJE2 187 aa7.15□□□□□ -1.26
SCFD1-221ENST00000556534 CRACR2BQ8N4Y2 399 aaPredicted RBP7.15□□□□□ -1.26
SCFD1-221ENST00000556534 ST13P5Q8NFI4 369 aaPredicted RBP7.15□□□□□ -1.26
SCFD1-221ENST00000556534 PPP1R14AQ96A00 147 aa7.15□□□□□ -1.26
SCFD1-221ENST00000556534 SYTL4Q96C24 671 aaPredicted RBP7.15□□□□□ -1.26
SCFD1-221ENST00000556534 GPR55Q9Y2T6 319 aaPredicted RBP7.15□□□□□ -1.26
SCFD1-221ENST00000556534 FADS2P1A8MWK0 482 aa7.14□□□□□ -1.27
SCFD1-221ENST00000556534 BIN1O00499 593 aa7.14□□□□□ -1.27
SCFD1-221ENST00000556534 KCNH1O95259 989 aa7.14□□□□□ -1.27
SCFD1-221ENST00000556534 RAC2P15153 192 aa7.14□□□□□ -1.27
SCFD1-221ENST00000556534 TRHRP34981 398 aaPredicted RBP7.14□□□□□ -1.27
SCFD1-221ENST00000556534 KIR2DL1P43626 348 aaPredicted RBP7.14□□□□□ -1.27
SCFD1-221ENST00000556534 KIR2DL2P43627 348 aaPredicted RBP7.14□□□□□ -1.27
SCFD1-221ENST00000556534 AFMP43652 599 aa7.14□□□□□ -1.27
SCFD1-221ENST00000556534 CHRNEQ04844 493 aa7.14□□□□□ -1.27
SCFD1-221ENST00000556534 GTF2IRD2BQ6EKJ0 949 aa7.14□□□□□ -1.27
SCFD1-221ENST00000556534 GTF2IRD2Q86UP8 949 aa7.14□□□□□ -1.27
SCFD1-221ENST00000556534 OXR1Q8N573 874 aa7.14□□□□□ -1.27
SCFD1-221ENST00000556534 TMEM52Q8NDY8 209 aa7.14□□□□□ -1.27
SCFD1-221ENST00000556534 UBXN4Q92575 508 aa7.14□□□□□ -1.27
SCFD1-221ENST00000556534 BACE2Q9Y5Z0 518 aa7.14□□□□□ -1.27
SCFD1-221ENST00000556534 CARMIL2Q6F5E8 1435 aa7.13□□□□□ -1.27
SCFD1-221ENST00000556534 NOP56O00567 594 aaKnown RBP7.13□□□□□ -1.27
SCFD1-221ENST00000556534 CAPNS1P04632 268 aa7.13□□□□□ -1.27
SCFD1-221ENST00000556534 NOP2P46087 812 aaKnown RBP7.13□□□□□ -1.27
SCFD1-221ENST00000556534 CYP4F3Q08477 520 aa7.13□□□□□ -1.27
SCFD1-221ENST00000556534 RASGRF1Q13972 1273 aa7.13□□□□□ -1.27
SCFD1-221ENST00000556534 SLCO6A1Q86UG4 719 aa7.13□□□□□ -1.27
SCFD1-221ENST00000556534 ZSWIM9Q86XI8 627 aa7.13□□□□□ -1.27
SCFD1-221ENST00000556534 PMFBP1Q8TBY8 1022 aa7.13□□□□□ -1.27
SCFD1-221ENST00000556534 BTN2A2Q8WVV5 523 aa7.13□□□□□ -1.27
SCFD1-221ENST00000556534 KIRREL1Q96J84 757 aa7.13□□□□□ -1.27
SCFD1-221ENST00000556534 TNFRSF10DQ9UBN6 386 aa7.13□□□□□ -1.27
SCFD1-221ENST00000556534 PDPK1O15530 556 aa7.12□□□□□ -1.27
SCFD1-221ENST00000556534 SOGA3Q5TF21 947 aa7.12□□□□□ -1.27
SCFD1-221ENST00000556534 CYP2R1Q6VVX0 501 aa7.12□□□□□ -1.27
SCFD1-221ENST00000556534 LILRA2Q8N149 483 aa7.12□□□□□ -1.27
SCFD1-221ENST00000556534 NAT16Q8N8M0 369 aa7.12□□□□□ -1.27
SCFD1-221ENST00000556534 MYLIPQ8WY64 445 aa7.12□□□□□ -1.27
SCFD1-221ENST00000556534 ZNF669Q96BR6 464 aaPredicted RBP7.12□□□□□ -1.27
SCFD1-221ENST00000556534 PTCHD1Q96NR3 888 aa7.12□□□□□ -1.27
SCFD1-221ENST00000556534 CCDC113Q9H0I3 377 aa7.12□□□□□ -1.27
SCFD1-221ENST00000556534 NKX2-4Q9H2Z4 354 aa7.12□□□□□ -1.27
SCFD1-221ENST00000556534 C19orf44Q9H6X5 657 aa7.12□□□□□ -1.27
SCFD1-221ENST00000556534 SNTG2Q9NY99 539 aa7.12□□□□□ -1.27
SCFD1-221ENST00000556534 A0A1W2PQU0 124 aa7.11□□□□□ -1.27
SCFD1-221ENST00000556534 CCDC85CA6NKD9 419 aa7.11□□□□□ -1.27
SCFD1-221ENST00000556534 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.11□□□□□ -1.27
SCFD1-221ENST00000556534 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.11□□□□□ -1.27
SCFD1-221ENST00000556534 NRDCO43847 1150 aa7.11□□□□□ -1.27
SCFD1-221ENST00000556534 SCRN1Q12765 414 aa7.11□□□□□ -1.27
SCFD1-221ENST00000556534 HSF5Q4G112 596 aaPredicted RBP7.11□□□□□ -1.27
SCFD1-221ENST00000556534 EEF1DP3Q658K8 133 aa7.11□□□□□ -1.27
SCFD1-221ENST00000556534 CEP128Q6ZU80 1094 aa7.11□□□□□ -1.27
SCFD1-221ENST00000556534 ABHD4Q8TB40 342 aa7.11□□□□□ -1.27
SCFD1-221ENST00000556534 FAM168AQ92567 244 aa7.11□□□□□ -1.27
SCFD1-221ENST00000556534 COPS5Q92905 334 aa7.11□□□□□ -1.27
SCFD1-221ENST00000556534 SHISA4Q96DD7 197 aa7.11□□□□□ -1.27
SCFD1-221ENST00000556534 DEPDC7Q96QD5 511 aa7.11□□□□□ -1.27
SCFD1-221ENST00000556534 KRTAP9-2Q9BYQ4 174 aa7.11□□□□□ -1.27
SCFD1-221ENST00000556534 RNF32Q9H0A6 362 aa7.11□□□□□ -1.27
SCFD1-221ENST00000556534 OSBPL2Q9H1P3 480 aa7.11□□□□□ -1.27
SCFD1-221ENST00000556534 LRP2BPQ9P2M1 347 aa7.11□□□□□ -1.27
SCFD1-221ENST00000556534 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.11□□□□□ -1.27
SCFD1-221ENST00000556534 FAM221BA6H8Z2 402 aa7.1□□□□□ -1.27
SCFD1-221ENST00000556534 C2orf71A6NGG8 1288 aa7.1□□□□□ -1.27
SCFD1-221ENST00000556534 PSPNO60542 156 aa7.1□□□□□ -1.27
SCFD1-221ENST00000556534 PPP2R2AP63151 447 aa7.1□□□□□ -1.27
SCFD1-221ENST00000556534 KCNMB1Q16558 191 aa7.1□□□□□ -1.27
SCFD1-221ENST00000556534 SPATC1Q76KD6 591 aa7.1□□□□□ -1.27
SCFD1-221ENST00000556534 NLRX1Q86UT6 975 aa7.1□□□□□ -1.27
SCFD1-221ENST00000556534 SPPL2CQ8IUH8 684 aa7.1□□□□□ -1.27
SCFD1-221ENST00000556534 KSR1Q8IVT5 923 aa7.1□□□□□ -1.27
SCFD1-221ENST00000556534 MKL1Q969V6 931 aa7.1□□□□□ -1.27
SCFD1-221ENST00000556534 SGSM3Q96HU1 749 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms