RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 HSF5Q4G112 596 aaPredicted RBP8.48□□□□□ -1.05
PRPF39-209ENST00000556353 FIBCD1Q8N539 461 aa8.48□□□□□ -1.05
PRPF39-209ENST00000556353 NAT16Q8N8M0 369 aa8.48□□□□□ -1.05
PRPF39-209ENST00000556353 RGS22Q8NE09 1264 aa8.48□□□□□ -1.05
PRPF39-209ENST00000556353 SMG5Q9UPR3 1016 aaKnown RBP8.48□□□□□ -1.05
PRPF39-209ENST00000556353 ZNF451Q9Y4E5 1061 aa8.48□□□□□ -1.05
PRPF39-209ENST00000556353 TEX51A0A1B0GUA7 166 aa8.47□□□□□ -1.05
PRPF39-209ENST00000556353 A0A1W2PQ45 241 aaPredicted RBP8.47□□□□□ -1.05
PRPF39-209ENST00000556353 A0A1W2PQY0 241 aa8.47□□□□□ -1.05
PRPF39-209ENST00000556353 H0Y8X5 98 aa8.47□□□□□ -1.05
PRPF39-209ENST00000556353 GSTM1P09488 218 aa8.47□□□□□ -1.05
PRPF39-209ENST00000556353 GIPRP48546 466 aa8.47□□□□□ -1.05
PRPF39-209ENST00000556353 RTP2Q5QGT7 225 aa8.47□□□□□ -1.05
PRPF39-209ENST00000556353 SPOCD1Q6ZMY3 1216 aa8.47□□□□□ -1.05
PRPF39-209ENST00000556353 SLCO6A1Q86UG4 719 aa8.47□□□□□ -1.05
PRPF39-209ENST00000556353 C1QL4Q86Z23 238 aa8.47□□□□□ -1.05
PRPF39-209ENST00000556353 C19orf47Q8N9M1 422 aaKnown RBP8.47□□□□□ -1.05
PRPF39-209ENST00000556353 CPLX3Q8WVH0 158 aa8.47□□□□□ -1.05
PRPF39-209ENST00000556353 SLC12A9Q9BXP2 914 aa8.47□□□□□ -1.05
PRPF39-209ENST00000556353 PHAXQ9H814 394 aaKnown RBP8.47□□□□□ -1.05
PRPF39-209ENST00000556353 SF3B6Q9Y3B4 125 aaKnown RBP8.47□□□□□ -1.05
PRPF39-209ENST00000556353 LTBP3Q9NS15 1303 aa8.47□□□□□ -1.05
PRPF39-209ENST00000556353 ARL4AP40617 200 aa8.46□□□□□ -1.06
PRPF39-209ENST00000556353 NOP2P46087 812 aaKnown RBP8.46□□□□□ -1.06
PRPF39-209ENST00000556353 NASPP49321 788 aaPredicted RBP8.46□□□□□ -1.06
PRPF39-209ENST00000556353 GNPTABQ3T906 1256 aa8.46□□□□□ -1.06
PRPF39-209ENST00000556353 TGIF2Q9GZN2 237 aa8.46□□□□□ -1.06
PRPF39-209ENST00000556353 KRTAP4-8A0A0G2JLE6 195 aa8.45□□□□□ -1.06
PRPF39-209ENST00000556353 HRKO00198 91 aa8.45□□□□□ -1.06
PRPF39-209ENST00000556353 LINC00310P59036 64 aa8.45□□□□□ -1.06
PRPF39-209ENST00000556353 LAPTM5Q13571 262 aa8.45□□□□□ -1.06
PRPF39-209ENST00000556353 CIAPIN1Q6FI81 312 aa8.45□□□□□ -1.06
PRPF39-209ENST00000556353 TMEM52Q8NDY8 209 aa8.45□□□□□ -1.06
PRPF39-209ENST00000556353 NOL6Q9H6R4 1146 aaKnown RBP8.45□□□□□ -1.06
PRPF39-209ENST00000556353 A0A087WZG4 1122 aa8.44□□□□□ -1.06
PRPF39-209ENST00000556353 CBFA2T2O43439 604 aa8.44□□□□□ -1.06
PRPF39-209ENST00000556353 ZSCAN22P10073 491 aaPredicted RBP8.44□□□□□ -1.06
PRPF39-209ENST00000556353 PRKCAP17252 672 aa8.44□□□□□ -1.06
PRPF39-209ENST00000556353 SDHBP21912 280 aa8.44□□□□□ -1.06
PRPF39-209ENST00000556353 ERVFRD-1P60508 538 aa8.44□□□□□ -1.06
PRPF39-209ENST00000556353 KIR3DS1Q14943 382 aa8.44□□□□□ -1.06
PRPF39-209ENST00000556353 OLFML2BQ68BL8 750 aa8.44□□□□□ -1.06
PRPF39-209ENST00000556353 NUP43Q8NFH3 380 aa8.44□□□□□ -1.06
PRPF39-209ENST00000556353 SEC16BQ96JE7 1060 aa8.44□□□□□ -1.06
PRPF39-209ENST00000556353 HAUS7Q99871 368 aa8.44□□□□□ -1.06
PRPF39-209ENST00000556353 CCSER2Q9H7U1 834 aa8.44□□□□□ -1.06
PRPF39-209ENST00000556353 INPP5FQ9Y2H2 1132 aa8.44□□□□□ -1.06
PRPF39-209ENST00000556353 DIS3Q9Y2L1 958 aaKnown RBP8.44□□□□□ -1.06
PRPF39-209ENST00000556353 A0A1W2PQH9 124 aa8.43□□□□□ -1.06
PRPF39-209ENST00000556353 ABLIM1O14639 778 aa8.43□□□□□ -1.06
PRPF39-209ENST00000556353 MPOP05164 745 aa8.43□□□□□ -1.06
PRPF39-209ENST00000556353 CEBPAP49715 358 aaPredicted RBP8.43□□□□□ -1.06
PRPF39-209ENST00000556353 SRSF3P84103 164 aaKnown RBP8.43□□□□□ -1.06
PRPF39-209ENST00000556353 CYP4F8P98187 520 aa8.43□□□□□ -1.06
PRPF39-209ENST00000556353 SLC7A5Q01650 507 aa8.43□□□□□ -1.06
PRPF39-209ENST00000556353 POU4F1Q01851 419 aa8.43□□□□□ -1.06
PRPF39-209ENST00000556353 PPP2R5EQ16537 467 aa8.43□□□□□ -1.06
PRPF39-209ENST00000556353 FBLN7Q53RD9 439 aa8.43□□□□□ -1.06
PRPF39-209ENST00000556353 HLA-DQA1Q5Y7H0 255 aa8.43□□□□□ -1.06
PRPF39-209ENST00000556353 HEATR6Q6AI08 1181 aaKnown RBP8.43□□□□□ -1.06
PRPF39-209ENST00000556353 CYP2R1Q6VVX0 501 aa8.43□□□□□ -1.06
PRPF39-209ENST00000556353 JAMLQ86YT9 394 aa8.43□□□□□ -1.06
PRPF39-209ENST00000556353 SIAH1Q8IUQ4 282 aa8.43□□□□□ -1.06
PRPF39-209ENST00000556353 SHDQ96IW2 340 aa8.43□□□□□ -1.06
PRPF39-209ENST00000556353 ZDHHC15Q96MV8 337 aa8.43□□□□□ -1.06
PRPF39-209ENST00000556353 JMJD8Q96S16 334 aa8.43□□□□□ -1.06
PRPF39-209ENST00000556353 SGPP1Q9BX95 441 aa8.43□□□□□ -1.06
PRPF39-209ENST00000556353 GBP3Q9H0R5 595 aa8.43□□□□□ -1.06
PRPF39-209ENST00000556353 ACBD3Q9H3P7 528 aa8.43□□□□□ -1.06
PRPF39-209ENST00000556353 SIRT5Q9NXA8 310 aa8.43□□□□□ -1.06
PRPF39-209ENST00000556353 WHRNQ9P202 907 aa8.43□□□□□ -1.06
PRPF39-209ENST00000556353 ACSL6Q9UKU0 697 aa8.43□□□□□ -1.06
PRPF39-209ENST00000556353 PCDHB10Q9UN67 800 aa8.43□□□□□ -1.06
PRPF39-209ENST00000556353 A0A1W2PQ27 194 aa8.42□□□□□ -1.06
PRPF39-209ENST00000556353 A0A1W2PQ64 194 aa8.42□□□□□ -1.06
PRPF39-209ENST00000556353 A0A1W2PQC6 194 aa8.42□□□□□ -1.06
PRPF39-209ENST00000556353 A0A1W2PQD8 194 aa8.42□□□□□ -1.06
PRPF39-209ENST00000556353 NUAK1O60285 661 aa8.42□□□□□ -1.06
PRPF39-209ENST00000556353 CD3EP07766 207 aa8.42□□□□□ -1.06
PRPF39-209ENST00000556353 LCNL1Q6ZST4 164 aa8.42□□□□□ -1.06
PRPF39-209ENST00000556353 FCRL3Q96P31 734 aaPredicted RBP8.42□□□□□ -1.06
PRPF39-209ENST00000556353 GCM1Q9NP62 436 aa8.42□□□□□ -1.06
PRPF39-209ENST00000556353 IMPACTQ9P2X3 320 aa8.42□□□□□ -1.06
PRPF39-209ENST00000556353 FGF10O15520 208 aaPredicted RBP8.41□□□□□ -1.06
PRPF39-209ENST00000556353 YBX1P67809 324 aaKnown RBP8.41□□□□□ -1.06
PRPF39-209ENST00000556353 TMEM62Q0P6H9 643 aa8.41□□□□□ -1.06
PRPF39-209ENST00000556353 PPP2R5DQ14738 602 aa8.41□□□□□ -1.06
PRPF39-209ENST00000556353 ADAT2Q7Z6V5 191 aaKnown RBP8.41□□□□□ -1.06
PRPF39-209ENST00000556353 ADCY4Q8NFM4 1077 aa8.41□□□□□ -1.06
PRPF39-209ENST00000556353 KLHL25Q9H0H3 589 aa8.41□□□□□ -1.06
PRPF39-209ENST00000556353 MBD1Q9UIS9 605 aaPredicted RBP8.41□□□□□ -1.06
PRPF39-209ENST00000556353 CNOT6Q9ULM6 557 aaKnown RBP8.41□□□□□ -1.06
PRPF39-209ENST00000556353 STRIP2Q9ULQ0 834 aa8.41□□□□□ -1.06
PRPF39-209ENST00000556353 VIPR1P32241 457 aa8.4□□□□□ -1.06
PRPF39-209ENST00000556353 TNFRSF12AQ9NP84 129 aa8.4□□□□□ -1.06
PRPF39-209ENST00000556353 CCDC9Q9Y3X0 531 aaKnown RBP8.4□□□□□ -1.06
PRPF39-209ENST00000556353 PPM1BO75688 479 aa8.39□□□□□ -1.07
PRPF39-209ENST00000556353 EPHX1P07099 455 aa8.39□□□□□ -1.07
PRPF39-209ENST00000556353 IFNGR1P15260 489 aa8.39□□□□□ -1.07
PRPF39-209ENST00000556353 CASP7P55210 303 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms