RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 PRRT3Q5FWE3 981 aa11.45□□□□□ -0.58
GTF2A1-204ENST00000556268 ELMSAN1Q6PJG2 1045 aa11.45□□□□□ -0.58
GTF2A1-204ENST00000556268 SCAF8Q9UPN6 1271 aaKnown RBP11.45□□□□□ -0.58
GTF2A1-204ENST00000556268 FNDC3AQ9Y2H6 1198 aaKnown RBP11.45□□□□□ -0.58
GTF2A1-204ENST00000556268 MYO3BQ8WXR4 1341 aa11.44□□□□□ -0.58
GTF2A1-204ENST00000556268 TBC1D8O95759 1140 aa11.44□□□□□ -0.58
GTF2A1-204ENST00000556268 EIF1AXP47813 144 aaKnown RBP11.44□□□□□ -0.58
GTF2A1-204ENST00000556268 PTPN12Q05209 780 aaKnown RBP11.44□□□□□ -0.58
GTF2A1-204ENST00000556268 CCDC27Q2M243 656 aa11.44□□□□□ -0.58
GTF2A1-204ENST00000556268 TTLL5Q6EMB2 1281 aa11.44□□□□□ -0.58
GTF2A1-204ENST00000556268 CD163Q86VB7 1156 aa11.44□□□□□ -0.58
GTF2A1-204ENST00000556268 ZNF296Q8WUU4 475 aaPredicted RBP11.44□□□□□ -0.58
GTF2A1-204ENST00000556268 EDEM1Q92611 657 aa11.44□□□□□ -0.58
GTF2A1-204ENST00000556268 MTMR7Q9Y216 660 aa11.44□□□□□ -0.58
GTF2A1-204ENST00000556268 AKAP11Q9UKA4 1901 aa11.43□□□□□ -0.58
GTF2A1-204ENST00000556268 C1QTNF9BB2RNN3 333 aa11.43□□□□□ -0.58
GTF2A1-204ENST00000556268 J3QW42 95 aa11.43□□□□□ -0.58
GTF2A1-204ENST00000556268 SOX10P56693 466 aa11.43□□□□□ -0.58
GTF2A1-204ENST00000556268 GCKRQ14397 625 aa11.43□□□□□ -0.58
GTF2A1-204ENST00000556268 GRIK5Q16478 980 aa11.43□□□□□ -0.58
GTF2A1-204ENST00000556268 CWF19L2Q2TBE0 894 aaKnown RBP11.43□□□□□ -0.58
GTF2A1-204ENST00000556268 G2E3Q7L622 706 aa11.43□□□□□ -0.58
GTF2A1-204ENST00000556268 ANKRD2Q9GZV1 360 aa11.43□□□□□ -0.58
GTF2A1-204ENST00000556268 SMG9Q9H0W8 520 aaKnown RBP11.43□□□□□ -0.58
GTF2A1-204ENST00000556268 ZNF804BA4D1E1 1349 aa11.42□□□□□ -0.58
GTF2A1-204ENST00000556268 IRS2Q9Y4H2 1338 aa11.42□□□□□ -0.58
GTF2A1-204ENST00000556268 ABL1P00519 1130 aa11.42□□□□□ -0.58
GTF2A1-204ENST00000556268 INHBEP58166 350 aa11.42□□□□□ -0.58
GTF2A1-204ENST00000556268 DNM1Q05193 864 aaKnown RBP11.42□□□□□ -0.58
GTF2A1-204ENST00000556268 NEXNQ0ZGT2 675 aa11.42□□□□□ -0.58
GTF2A1-204ENST00000556268 ZNF211Q13398 564 aaPredicted RBP11.42□□□□□ -0.58
GTF2A1-204ENST00000556268 MAP3K11Q16584 847 aa11.42□□□□□ -0.58
GTF2A1-204ENST00000556268 B4GALNT3Q6L9W6 998 aa11.42□□□□□ -0.58
GTF2A1-204ENST00000556268 C15orf52Q6ZUT6 534 aaKnown RBP11.42□□□□□ -0.58
GTF2A1-204ENST00000556268 OR13H1Q8NG92 308 aa11.42□□□□□ -0.58
GTF2A1-204ENST00000556268 R3HDMLQ9H3Y0 253 aa11.42□□□□□ -0.58
GTF2A1-204ENST00000556268 PAPPA2Q9BXP8 1791 aa11.41□□□□□ -0.58
GTF2A1-204ENST00000556268 UNCXA6NJT0 531 aa11.41□□□□□ -0.58
GTF2A1-204ENST00000556268 PDGFAP04085 211 aa11.41□□□□□ -0.58
GTF2A1-204ENST00000556268 KLRK1P26718 216 aa11.41□□□□□ -0.58
GTF2A1-204ENST00000556268 IGHMBP2P38935 993 aaKnown RBP11.41□□□□□ -0.58
GTF2A1-204ENST00000556268 ARMC9Q7Z3E5 817 aa11.41□□□□□ -0.58
GTF2A1-204ENST00000556268 UBE3BQ7Z3V4 1068 aa11.41□□□□□ -0.58
GTF2A1-204ENST00000556268 CD209Q9NNX6 404 aa11.41□□□□□ -0.58
GTF2A1-204ENST00000556268 ANO2Q9NQ90 1003 aa11.41□□□□□ -0.58
GTF2A1-204ENST00000556268 HDAC9Q9UKV0 1011 aa11.41□□□□□ -0.58
GTF2A1-204ENST00000556268 PSME4Q14997 1843 aa11.41□□□□□ -0.58
GTF2A1-204ENST00000556268 A0A0A0MRY4 1105 aa11.4□□□□□ -0.58
GTF2A1-204ENST00000556268 NPR3P17342 541 aa11.4□□□□□ -0.58
GTF2A1-204ENST00000556268 NF2P35240 595 aa11.4□□□□□ -0.58
GTF2A1-204ENST00000556268 APOBEC3FQ8IUX4 373 aaKnown RBP11.4□□□□□ -0.58
GTF2A1-204ENST00000556268 KIAA0825Q8IV33 1275 aa11.4□□□□□ -0.58
GTF2A1-204ENST00000556268 TSR2Q969E8 191 aaKnown RBP11.4□□□□□ -0.58
GTF2A1-204ENST00000556268 PLD4Q96BZ4 506 aa11.4□□□□□ -0.58
GTF2A1-204ENST00000556268 STK31Q9BXU1 1019 aa11.4□□□□□ -0.58
GTF2A1-204ENST00000556268 DEFB129Q9H1M3 183 aa11.4□□□□□ -0.58
GTF2A1-204ENST00000556268 ABI2Q9NYB9 513 aaPredicted RBP11.4□□□□□ -0.58
GTF2A1-204ENST00000556268 TMEM63CQ9P1W3 806 aa11.4□□□□□ -0.58
GTF2A1-204ENST00000556268 IL16Q14005 1332 aa11.39□□□□□ -0.59
GTF2A1-204ENST00000556268 FKTNO75072 461 aa11.39□□□□□ -0.59
GTF2A1-204ENST00000556268 SASH1O94885 1247 aa11.39□□□□□ -0.59
GTF2A1-204ENST00000556268 GHRHP01286 108 aa11.39□□□□□ -0.59
GTF2A1-204ENST00000556268 IL1R1P14778 569 aa11.39□□□□□ -0.59
GTF2A1-204ENST00000556268 MZF1P28698 734 aaPredicted RBP11.39□□□□□ -0.59
GTF2A1-204ENST00000556268 FOXO4P98177 505 aa11.39□□□□□ -0.59
GTF2A1-204ENST00000556268 CHRNDQ07001 517 aa11.39□□□□□ -0.59
GTF2A1-204ENST00000556268 SREBF2Q12772 1141 aa11.39□□□□□ -0.59
GTF2A1-204ENST00000556268 TWISTNBQ3B726 338 aaPredicted RBP11.39□□□□□ -0.59
GTF2A1-204ENST00000556268 TTC39BQ5VTQ0 682 aaPredicted RBP11.39□□□□□ -0.59
GTF2A1-204ENST00000556268 PDE12Q6L8Q7 609 aaKnown RBP11.39□□□□□ -0.59
GTF2A1-204ENST00000556268 FBXO46Q6PJ61 603 aaPredicted RBP11.39□□□□□ -0.59
GTF2A1-204ENST00000556268 ZNF438Q7Z4V0 828 aa11.39□□□□□ -0.59
GTF2A1-204ENST00000556268 DMRTC2Q8IXT2 367 aaPredicted RBP11.39□□□□□ -0.59
GTF2A1-204ENST00000556268 CERS5Q8N5B7 392 aa11.39□□□□□ -0.59
GTF2A1-204ENST00000556268 LINS1Q8NG48 757 aa11.39□□□□□ -0.59
GTF2A1-204ENST00000556268 TTC9Q92623 222 aa11.39□□□□□ -0.59
GTF2A1-204ENST00000556268 MPHOSPH8Q99549 860 aa11.39□□□□□ -0.59
GTF2A1-204ENST00000556268 ELP3Q9H9T3 547 aa11.39□□□□□ -0.59
GTF2A1-204ENST00000556268 VAMP4O75379 141 aa11.38□□□□□ -0.59
GTF2A1-204ENST00000556268 FAM13AO94988 1023 aa11.38□□□□□ -0.59
GTF2A1-204ENST00000556268 FKBP1AP62942 108 aaKnown RBP11.38□□□□□ -0.59
GTF2A1-204ENST00000556268 CCDC184Q52MB2 194 aa11.38□□□□□ -0.59
GTF2A1-204ENST00000556268 ALKBH2Q6NS38 261 aa11.38□□□□□ -0.59
GTF2A1-204ENST00000556268 DNAAF4Q8WXU2 420 aa11.38□□□□□ -0.59
GTF2A1-204ENST00000556268 PRMT6Q96LA8 375 aaPredicted RBP11.38□□□□□ -0.59
GTF2A1-204ENST00000556268 A6NHS1 94 aa11.37□□□□□ -0.59
GTF2A1-204ENST00000556268 MANSC4A6NHS7 340 aaPredicted RBP11.37□□□□□ -0.59
GTF2A1-204ENST00000556268 SNAP23O00161 211 aa11.37□□□□□ -0.59
GTF2A1-204ENST00000556268 CYP2E1P05181 493 aaPredicted RBP11.37□□□□□ -0.59
GTF2A1-204ENST00000556268 RPLP1P05386 114 aaKnown RBP11.37□□□□□ -0.59
GTF2A1-204ENST00000556268 PCSK2P16519 638 aa11.37□□□□□ -0.59
GTF2A1-204ENST00000556268 SERPINB4P48594 390 aa11.37□□□□□ -0.59
GTF2A1-204ENST00000556268 DLGAP5Q15398 846 aa11.37□□□□□ -0.59
GTF2A1-204ENST00000556268 GRIK4Q16099 956 aa11.37□□□□□ -0.59
GTF2A1-204ENST00000556268 MYH16Q9H6N6 1097 aa11.37□□□□□ -0.59
GTF2A1-204ENST00000556268 POLIQ9UNA4 740 aa11.37□□□□□ -0.59
GTF2A1-204ENST00000556268 ANGEL1Q9UNK9 670 aaKnown RBP11.37□□□□□ -0.59
GTF2A1-204ENST00000556268 ANKRD18BA2A2Z9 1011 aa11.36□□□□□ -0.59
GTF2A1-204ENST00000556268 TAF5LO75529 589 aa11.36□□□□□ -0.59
GTF2A1-204ENST00000556268 USP2O75604 605 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms