RNA–Protein interactions for RNA: ENST00000556166.2

GABRB3-210, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-210ENST00000556166 V9GY48 417 aaPredicted RBP13.32□□□□□ -0.28
GABRB3-210ENST00000556166 CCDC196A0A1B0GTZ2 297 aa13.32□□□□□ -0.28
GABRB3-210ENST00000556166 ZBED4O75132 1171 aa13.32□□□□□ -0.28
GABRB3-210ENST00000556166 IFNAR1P17181 557 aa13.32□□□□□ -0.28
GABRB3-210ENST00000556166 CAP1Q01518 475 aa13.32□□□□□ -0.28
GABRB3-210ENST00000556166 QRICH1Q2TAL8 776 aa13.32□□□□□ -0.28
GABRB3-210ENST00000556166 PHKBQ93100 1093 aa13.32□□□□□ -0.28
GABRB3-210ENST00000556166 MORF4L1Q9UBU8 362 aa13.32□□□□□ -0.28
GABRB3-210ENST00000556166 RIPK3Q9Y572 518 aa13.32□□□□□ -0.28
GABRB3-210ENST00000556166 CNTNAP5Q8WYK1 1306 aa13.31□□□□□ -0.28
GABRB3-210ENST00000556166 ATP2A1O14983 1001 aa13.31□□□□□ -0.28
GABRB3-210ENST00000556166 MCM2P49736 904 aa13.31□□□□□ -0.28
GABRB3-210ENST00000556166 CDC37Q16543 378 aaPredicted RBP13.31□□□□□ -0.28
GABRB3-210ENST00000556166 CCDC83Q8IWF9 413 aa13.31□□□□□ -0.28
GABRB3-210ENST00000556166 CPXCR1Q8N123 301 aa13.31□□□□□ -0.28
GABRB3-210ENST00000556166 MB21D1Q8N884 522 aa13.31□□□□□ -0.28
GABRB3-210ENST00000556166 GPRC5AQ8NFJ5 357 aa13.31□□□□□ -0.28
GABRB3-210ENST00000556166 MOV10L1Q9BXT6 1211 aaKnown RBP13.31□□□□□ -0.28
GABRB3-210ENST00000556166 SPATC1LQ9H0A9 340 aa13.31□□□□□ -0.28
GABRB3-210ENST00000556166 SH2B1Q9NRF2 756 aaPredicted RBP13.31□□□□□ -0.28
GABRB3-210ENST00000556166 SAGE1Q9NXZ1 904 aa13.31□□□□□ -0.28
GABRB3-210ENST00000556166 PNMA6FA0A0J9YX94 578 aa13.3□□□□□ -0.28
GABRB3-210ENST00000556166 ZBTB5O15062 677 aa13.3□□□□□ -0.28
GABRB3-210ENST00000556166 DHX16O60231 1041 aaKnown RBP13.3□□□□□ -0.28
GABRB3-210ENST00000556166 JAK2O60674 1132 aa13.3□□□□□ -0.28
GABRB3-210ENST00000556166 CTGFP29279 349 aa13.3□□□□□ -0.28
GABRB3-210ENST00000556166 STAT3P40763 770 aa13.3□□□□□ -0.28
GABRB3-210ENST00000556166 ERVK-9P63128 1117 aa13.3□□□□□ -0.28
GABRB3-210ENST00000556166 ERVK-24P63145 666 aa13.3□□□□□ -0.28
GABRB3-210ENST00000556166 PKN1Q16512 942 aa13.3□□□□□ -0.28
GABRB3-210ENST00000556166 HOMER1Q86YM7 354 aa13.3□□□□□ -0.28
GABRB3-210ENST00000556166 GTF3C2Q8WUA4 911 aaPredicted RBP13.3□□□□□ -0.28
GABRB3-210ENST00000556166 PORCNQ9H237 461 aa13.3□□□□□ -0.28
GABRB3-210ENST00000556166 PRPF3O43395 683 aaKnown RBP13.29□□□□□ -0.28
GABRB3-210ENST00000556166 ICAM1P05362 532 aa13.29□□□□□ -0.28
GABRB3-210ENST00000556166 FDX1P10109 184 aa13.29□□□□□ -0.28
GABRB3-210ENST00000556166 FDPSP14324 419 aaKnown RBP13.29□□□□□ -0.28
GABRB3-210ENST00000556166 PLS1Q14651 629 aa13.29□□□□□ -0.28
GABRB3-210ENST00000556166 FAM110CQ1W6H9 321 aa13.29□□□□□ -0.28
GABRB3-210ENST00000556166 NSUN7Q8NE18 718 aaKnown RBP13.29□□□□□ -0.28
GABRB3-210ENST00000556166 SHISA4Q96DD7 197 aa13.29□□□□□ -0.28
GABRB3-210ENST00000556166 RRP36Q96EU6 259 aaKnown RBP13.29□□□□□ -0.28
GABRB3-210ENST00000556166 SLC26A6Q9BXS9 759 aa13.29□□□□□ -0.28
GABRB3-210ENST00000556166 BAZ2BQ9UIF8 2168 aaKnown RBP13.29□□□□□ -0.28
GABRB3-210ENST00000556166 GPR25O00155 361 aa13.28□□□□□ -0.28
GABRB3-210ENST00000556166 CPLX1O14810 134 aa13.28□□□□□ -0.28
GABRB3-210ENST00000556166 ECM2O94769 699 aaPredicted RBP13.28□□□□□ -0.28
GABRB3-210ENST00000556166 FMNL1O95466 1100 aaPredicted RBP13.28□□□□□ -0.28
GABRB3-210ENST00000556166 SLC4A3P48751 1232 aa13.28□□□□□ -0.28
GABRB3-210ENST00000556166 OAZ1P54368 228 aa13.28□□□□□ -0.28
GABRB3-210ENST00000556166 CUL4AQ13619 759 aa13.28□□□□□ -0.28
GABRB3-210ENST00000556166 SNRNP48Q6IEG0 339 aaKnown RBP13.28□□□□□ -0.28
GABRB3-210ENST00000556166 RIOX2Q8IUF8 465 aa13.28□□□□□ -0.28
GABRB3-210ENST00000556166 CLEC4DQ8WXI8 215 aa13.28□□□□□ -0.28
GABRB3-210ENST00000556166 COA7Q96BR5 231 aa13.28□□□□□ -0.28
GABRB3-210ENST00000556166 AIFM3Q96NN9 605 aa13.28□□□□□ -0.28
GABRB3-210ENST00000556166 TEX13BQ9BXU2 312 aa13.28□□□□□ -0.28
GABRB3-210ENST00000556166 ARHGAP39Q9C0H5 1083 aa13.28□□□□□ -0.28
GABRB3-210ENST00000556166 EFCC1Q9HA90 598 aa13.28□□□□□ -0.28
GABRB3-210ENST00000556166 FOXN1O15353 648 aa13.28□□□□□ -0.28
GABRB3-210ENST00000556166 ERCC3P19447 782 aa13.28□□□□□ -0.28
GABRB3-210ENST00000556166 SSRP1Q08945 709 aaKnown RBP13.28□□□□□ -0.28
GABRB3-210ENST00000556166 USH1GQ495M9 461 aa13.28□□□□□ -0.28
GABRB3-210ENST00000556166 MUM1L1Q5H9M0 696 aa13.28□□□□□ -0.28
GABRB3-210ENST00000556166 TYW1BQ6NUM6 668 aa13.28□□□□□ -0.28
GABRB3-210ENST00000556166 FBXO11Q86XK2 927 aa13.28□□□□□ -0.28
GABRB3-210ENST00000556166 SMARCC2Q8TAQ2 1214 aa13.28□□□□□ -0.28
GABRB3-210ENST00000556166 BEGAINQ9BUH8 593 aa13.28□□□□□ -0.28
GABRB3-210ENST00000556166 CCPG1Q9ULG6 757 aa13.28□□□□□ -0.28
GABRB3-210ENST00000556166 CTDP1Q9Y5B0 961 aaPredicted RBP13.28□□□□□ -0.28
GABRB3-210ENST00000556166 PARP14Q460N5 1801 aa13.27□□□□□ -0.28
GABRB3-210ENST00000556166 PTPDC1A2A3K4 754 aa13.27□□□□□ -0.29
GABRB3-210ENST00000556166 K7ELQ4 463 aaPredicted RBP13.27□□□□□ -0.29
GABRB3-210ENST00000556166 OPLAHO14841 1288 aa13.27□□□□□ -0.29
GABRB3-210ENST00000556166 ALAS1P13196 640 aa13.27□□□□□ -0.29
GABRB3-210ENST00000556166 SP3Q02447 781 aa13.27□□□□□ -0.29
GABRB3-210ENST00000556166 PFKFB3Q16875 520 aaPredicted RBP13.27□□□□□ -0.29
GABRB3-210ENST00000556166 WWC2Q6AWC2 1192 aa13.27□□□□□ -0.29
GABRB3-210ENST00000556166 ZNF296Q8WUU4 475 aaPredicted RBP13.27□□□□□ -0.29
GABRB3-210ENST00000556166 TBC1D5Q92609 795 aa13.27□□□□□ -0.29
GABRB3-210ENST00000556166 GPKOWQ92917 476 aaPredicted RBP eCLIP13.27□□□□□ -0.29
GABRB3-210ENST00000556166 DDX11Q96FC9 970 aa13.27□□□□□ -0.29
GABRB3-210ENST00000556166 AMNQ9BXJ7 453 aa13.27□□□□□ -0.29
GABRB3-210ENST00000556166 RNF26Q9BY78 433 aaPredicted RBP13.27□□□□□ -0.29
GABRB3-210ENST00000556166 HOMER2Q9NSB8 354 aa13.27□□□□□ -0.29
GABRB3-210ENST00000556166 PCDHA1Q9Y5I3 950 aa13.27□□□□□ -0.29
GABRB3-210ENST00000556166 STXBP3O00186 592 aa13.26□□□□□ -0.29
GABRB3-210ENST00000556166 ADAMTS3O15072 1205 aa13.26□□□□□ -0.29
GABRB3-210ENST00000556166 HSPA1AP0DMV8 641 aaKnown RBP13.26□□□□□ -0.29
GABRB3-210ENST00000556166 HSPA1BP0DMV9 641 aaKnown RBP13.26□□□□□ -0.29
GABRB3-210ENST00000556166 LACTBP83111 547 aaPredicted RBP13.26□□□□□ -0.29
GABRB3-210ENST00000556166 NOM1Q5C9Z4 860 aaKnown RBP13.26□□□□□ -0.29
GABRB3-210ENST00000556166 NCAPG2Q86XI2 1143 aa13.26□□□□□ -0.29
GABRB3-210ENST00000556166 TRIM47Q96LD4 638 aa13.26□□□□□ -0.29
GABRB3-210ENST00000556166 TRERF1Q96PN7 1200 aa13.26□□□□□ -0.29
GABRB3-210ENST00000556166 LLPHQ9BRT6 129 aaKnown RBP13.26□□□□□ -0.29
GABRB3-210ENST00000556166 ORC3Q9UBD5 711 aaPredicted RBP13.26□□□□□ -0.29
GABRB3-210ENST00000556166 A0A0G2JMZ2 1700 aa13.25□□□□□ -0.29
GABRB3-210ENST00000556166 NFIBO00712 420 aa13.25□□□□□ -0.29
GABRB3-210ENST00000556166 CDKL5O76039 1030 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms