RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 RAG1P15918 1043 aa7.03□□□□□ -1.28
PRKCH-220ENST00000556164 ITGB8P26012 769 aa7.03□□□□□ -1.28
PRKCH-220ENST00000556164 EPHB4P54760 987 aa7.03□□□□□ -1.28
PRKCH-220ENST00000556164 ICA1Q05084 483 aa7.03□□□□□ -1.28
PRKCH-220ENST00000556164 FPGSQ05932 587 aa7.03□□□□□ -1.28
PRKCH-220ENST00000556164 C1orf53Q5VUE5 145 aa7.03□□□□□ -1.28
PRKCH-220ENST00000556164 TMED8Q6PL24 325 aaPredicted RBP7.03□□□□□ -1.28
PRKCH-220ENST00000556164 TMEM179Q6ZVK1 233 aa7.03□□□□□ -1.28
PRKCH-220ENST00000556164 RNF180Q86T96 592 aa7.03□□□□□ -1.28
PRKCH-220ENST00000556164 AACSQ86V21 672 aa7.03□□□□□ -1.28
PRKCH-220ENST00000556164 CLEC10AQ8IUN9 316 aa7.03□□□□□ -1.28
PRKCH-220ENST00000556164 ITPRIPQ8IWB1 547 aa7.03□□□□□ -1.28
PRKCH-220ENST00000556164 FTSJ3Q8IY81 847 aaKnown RBP7.03□□□□□ -1.28
PRKCH-220ENST00000556164 ABRAQ8N0Z2 381 aa7.03□□□□□ -1.28
PRKCH-220ENST00000556164 SLC44A5Q8NCS7 719 aa7.03□□□□□ -1.28
PRKCH-220ENST00000556164 SDR42E1Q8WUS8 393 aa7.03□□□□□ -1.28
PRKCH-220ENST00000556164 MMP19Q99542 508 aa7.03□□□□□ -1.28
PRKCH-220ENST00000556164 SH2D4AQ9H788 454 aa7.03□□□□□ -1.28
PRKCH-220ENST00000556164 ARHGEF10LQ9HCE6 1279 aa7.03□□□□□ -1.28
PRKCH-220ENST00000556164 NOP58Q9Y2X3 529 aaKnown RBP7.03□□□□□ -1.28
PRKCH-220ENST00000556164 ADGRG1Q9Y653 693 aa7.03□□□□□ -1.28
PRKCH-220ENST00000556164 TACC3Q9Y6A5 838 aa7.03□□□□□ -1.28
PRKCH-220ENST00000556164 A0A1W2PQ45 241 aaPredicted RBP7.02□□□□□ -1.29
PRKCH-220ENST00000556164 A0A1W2PQY0 241 aa7.02□□□□□ -1.29
PRKCH-220ENST00000556164 SOWAHDA6NJG2 315 aa7.02□□□□□ -1.29
PRKCH-220ENST00000556164 SLC25A27O95847 323 aa7.02□□□□□ -1.29
PRKCH-220ENST00000556164 PGK2P07205 417 aa7.02□□□□□ -1.29
PRKCH-220ENST00000556164 AKR1B1P15121 316 aa7.02□□□□□ -1.29
PRKCH-220ENST00000556164 PDE6AP16499 860 aa7.02□□□□□ -1.29
PRKCH-220ENST00000556164 DNAJB2P25686 324 aa7.02□□□□□ -1.29
PRKCH-220ENST00000556164 GRIN2CQ14957 1233 aa7.02□□□□□ -1.29
PRKCH-220ENST00000556164 TTF1Q15361 905 aaPredicted RBP7.02□□□□□ -1.29
PRKCH-220ENST00000556164 SLC9C2Q5TAH2 1124 aa7.02□□□□□ -1.29
PRKCH-220ENST00000556164 PHLDB3Q6NSJ2 640 aa7.02□□□□□ -1.29
PRKCH-220ENST00000556164 USP38Q8NB14 1042 aa7.02□□□□□ -1.29
PRKCH-220ENST00000556164 LENG1Q96BZ8 264 aaPredicted RBP7.02□□□□□ -1.29
PRKCH-220ENST00000556164 DYNLL2Q96FJ2 89 aa7.02□□□□□ -1.29
PRKCH-220ENST00000556164 TMEM121BQ9BXQ6 578 aaPredicted RBP7.02□□□□□ -1.29
PRKCH-220ENST00000556164 VCPKMTQ9H867 229 aa7.02□□□□□ -1.29
PRKCH-220ENST00000556164 DCP1AQ9NPI6 582 aaPredicted RBP7.02□□□□□ -1.29
PRKCH-220ENST00000556164 TMEM39AQ9NV64 488 aa7.02□□□□□ -1.29
PRKCH-220ENST00000556164 SWAP70Q9UH65 585 aa7.02□□□□□ -1.29
PRKCH-220ENST00000556164 NRBP1Q9UHY1 535 aa7.02□□□□□ -1.29
PRKCH-220ENST00000556164 EXOC6BQ9Y2D4 811 aa7.02□□□□□ -1.29
PRKCH-220ENST00000556164 ZNF532Q9HCE3 1301 aa7.01□□□□□ -1.29
PRKCH-220ENST00000556164 TCF20Q9UGU0 1960 aaKnown RBP7.01□□□□□ -1.29
PRKCH-220ENST00000556164 ROBO3Q96MS0 1386 aa7.01□□□□□ -1.29
PRKCH-220ENST00000556164 DCDC2CA8MYV0 355 aa7.01□□□□□ -1.29
PRKCH-220ENST00000556164 GOLIM4O00461 696 aa7.01□□□□□ -1.29
PRKCH-220ENST00000556164 KIAA0355O15063 1070 aa7.01□□□□□ -1.29
PRKCH-220ENST00000556164 WDR46O15213 610 aaKnown RBP7.01□□□□□ -1.29
PRKCH-220ENST00000556164 MAP3K7O43318 606 aa7.01□□□□□ -1.29
PRKCH-220ENST00000556164 AKR1A1P14550 325 aa7.01□□□□□ -1.29
PRKCH-220ENST00000556164 TAL1P17542 331 aaPredicted RBP7.01□□□□□ -1.29
PRKCH-220ENST00000556164 VAC14Q08AM6 782 aa7.01□□□□□ -1.29
PRKCH-220ENST00000556164 KCTD2Q14681 263 aa7.01□□□□□ -1.29
PRKCH-220ENST00000556164 TMEM132BQ14DG7 1078 aa7.01□□□□□ -1.29
PRKCH-220ENST00000556164 TJAP1Q5JTD0 557 aa7.01□□□□□ -1.29
PRKCH-220ENST00000556164 ERC1Q8IUD2 1116 aa7.01□□□□□ -1.29
PRKCH-220ENST00000556164 NPAS4Q8IUM7 802 aa7.01□□□□□ -1.29
PRKCH-220ENST00000556164 LCORLQ8N3X6 602 aa7.01□□□□□ -1.29
PRKCH-220ENST00000556164 TIFAQ96CG3 184 aa7.01□□□□□ -1.29
PRKCH-220ENST00000556164 DNAJC2Q99543 621 aaKnown RBP7.01□□□□□ -1.29
PRKCH-220ENST00000556164 TINF2Q9BSI4 451 aa7.01□□□□□ -1.29
PRKCH-220ENST00000556164 BCL11AQ9H165 835 aa7.01□□□□□ -1.29
PRKCH-220ENST00000556164 IL1RAPL2Q9NP60 686 aa7.01□□□□□ -1.29
PRKCH-220ENST00000556164 STARD7Q9NQZ5 370 aa7.01□□□□□ -1.29
PRKCH-220ENST00000556164 FBXO28Q9NVF7 368 aa7.01□□□□□ -1.29
PRKCH-220ENST00000556164 CNPY2Q9Y2B0 182 aa7.01□□□□□ -1.29
PRKCH-220ENST00000556164 TMX2Q9Y320 296 aa7.01□□□□□ -1.29
PRKCH-220ENST00000556164 GREB1LQ9C091 1923 aaPredicted RBP7.01□□□□□ -1.29
PRKCH-220ENST00000556164 HSFX4A0A1B0GTS1 333 aaPredicted RBP7□□□□□ -1.29
PRKCH-220ENST00000556164 HSFX3A0A1B0GWH4 333 aaPredicted RBP7□□□□□ -1.29
PRKCH-220ENST00000556164 TNFRSF10AO00220 468 aa7□□□□□ -1.29
PRKCH-220ENST00000556164 ADAMTS4O75173 837 aa7□□□□□ -1.29
PRKCH-220ENST00000556164 ZNF865P0CJ78 1059 aaPredicted RBP7□□□□□ -1.29
PRKCH-220ENST00000556164 RLBP1P12271 317 aa7□□□□□ -1.29
PRKCH-220ENST00000556164 EEF2P13639 858 aaKnown RBP7□□□□□ -1.29
PRKCH-220ENST00000556164 STAT3P40763 770 aa7□□□□□ -1.29
PRKCH-220ENST00000556164 ACLYP53396 1101 aa7□□□□□ -1.29
PRKCH-220ENST00000556164 MARSP56192 900 aaKnown RBP7□□□□□ -1.29
PRKCH-220ENST00000556164 FAAP100Q0VG06 881 aa7□□□□□ -1.29
PRKCH-220ENST00000556164 QPCTQ16769 361 aa7□□□□□ -1.29
PRKCH-220ENST00000556164 ZNF792Q3KQV3 632 aa7□□□□□ -1.29
PRKCH-220ENST00000556164 NAALADL2Q58DX5 795 aa7□□□□□ -1.29
PRKCH-220ENST00000556164 TMEM164Q5U3C3 297 aa7□□□□□ -1.29
PRKCH-220ENST00000556164 CEP85Q6P2H3 762 aa7□□□□□ -1.29
PRKCH-220ENST00000556164 CCDC129Q6ZRS4 1044 aa7□□□□□ -1.29
PRKCH-220ENST00000556164 RIOX2Q8IUF8 465 aa7□□□□□ -1.29
PRKCH-220ENST00000556164 SIAH1Q8IUQ4 282 aa7□□□□□ -1.29
PRKCH-220ENST00000556164 AMOTL1Q8IY63 956 aa7□□□□□ -1.29
PRKCH-220ENST00000556164 NUP133Q8WUM0 1156 aa7□□□□□ -1.29
PRKCH-220ENST00000556164 PPM1EQ8WY54 764 aa7□□□□□ -1.29
PRKCH-220ENST00000556164 TOX2Q96NM4 488 aa7□□□□□ -1.29
PRKCH-220ENST00000556164 GAS2L1Q99501 681 aaPredicted RBP7□□□□□ -1.29
PRKCH-220ENST00000556164 ZNF576Q9H609 170 aa7□□□□□ -1.29
PRKCH-220ENST00000556164 ARMT1Q9H993 441 aa7□□□□□ -1.29
PRKCH-220ENST00000556164 ZHX1Q9UKY1 873 aaPredicted RBP7□□□□□ -1.29
PRKCH-220ENST00000556164 DIS3Q9Y2L1 958 aaKnown RBP7□□□□□ -1.29
PRKCH-220ENST00000556164 SPTBN5Q9NRC6 3674 aaKnown RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms