RNA–Protein interactions for RNA: ENST00000555953.1

SCFD1-217, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-217ENST00000555953 JMJD8Q96S16 334 aa7.19□□□□□ -1.26
SCFD1-217ENST00000555953 DSCC1Q9BVC3 393 aa7.19□□□□□ -1.26
SCFD1-217ENST00000555953 ACSL6Q9UKU0 697 aa7.19□□□□□ -1.26
SCFD1-217ENST00000555953 ABLIM1O14639 778 aa7.18□□□□□ -1.26
SCFD1-217ENST00000555953 IRS4O14654 1257 aaPredicted RBP7.18□□□□□ -1.26
SCFD1-217ENST00000555953 GSNP06396 782 aa7.18□□□□□ -1.26
SCFD1-217ENST00000555953 ARL4AP40617 200 aa7.18□□□□□ -1.26
SCFD1-217ENST00000555953 BUD31P41223 144 aaPredicted RBP7.18□□□□□ -1.26
SCFD1-217ENST00000555953 PMS1P54277 932 aaKnown RBP7.18□□□□□ -1.26
SCFD1-217ENST00000555953 CYP4F8P98187 520 aa7.18□□□□□ -1.26
SCFD1-217ENST00000555953 LAPTM5Q13571 262 aa7.18□□□□□ -1.26
SCFD1-217ENST00000555953 ZNF394Q53GI3 561 aa7.18□□□□□ -1.26
SCFD1-217ENST00000555953 OLFML2BQ68BL8 750 aa7.18□□□□□ -1.26
SCFD1-217ENST00000555953 USP48Q86UV5 1035 aa7.18□□□□□ -1.26
SCFD1-217ENST00000555953 TMEM151BQ8IW70 566 aa7.18□□□□□ -1.26
SCFD1-217ENST00000555953 MARCH10Q8NA82 808 aaPredicted RBP7.18□□□□□ -1.26
SCFD1-217ENST00000555953 MZB1Q8WU39 189 aa7.18□□□□□ -1.26
SCFD1-217ENST00000555953 TNFRSF12AQ9NP84 129 aa7.18□□□□□ -1.26
SCFD1-217ENST00000555953 IMPACTQ9P2X3 320 aa7.18□□□□□ -1.26
SCFD1-217ENST00000555953 PCDHGB7Q9Y5F8 929 aa7.18□□□□□ -1.26
SCFD1-217ENST00000555953 A0A0G2JLL6 359 aaPredicted RBP7.17□□□□□ -1.26
SCFD1-217ENST00000555953 NUDT19A8MXV4 375 aa7.17□□□□□ -1.26
SCFD1-217ENST00000555953 H0Y8X5 98 aa7.17□□□□□ -1.26
SCFD1-217ENST00000555953 IMPDH2P12268 514 aa7.17□□□□□ -1.26
SCFD1-217ENST00000555953 FANCCQ00597 558 aa7.17□□□□□ -1.26
SCFD1-217ENST00000555953 RAB3GAP1Q15042 981 aa7.17□□□□□ -1.26
SCFD1-217ENST00000555953 DCAF15Q66K64 600 aa7.17□□□□□ -1.26
SCFD1-217ENST00000555953 TMC6Q7Z403 805 aa7.17□□□□□ -1.26
SCFD1-217ENST00000555953 TMEFF1Q8IYR6 380 aa7.17□□□□□ -1.26
SCFD1-217ENST00000555953 TAB3Q8N5C8 712 aaPredicted RBP7.17□□□□□ -1.26
SCFD1-217ENST00000555953 FERD3LQ96RJ6 166 aa7.17□□□□□ -1.26
SCFD1-217ENST00000555953 SLC12A9Q9BXP2 914 aa7.17□□□□□ -1.26
SCFD1-217ENST00000555953 KRTAP4-11Q9BYQ6 195 aa7.17□□□□□ -1.26
SCFD1-217ENST00000555953 BACH2Q9BYV9 841 aa7.17□□□□□ -1.26
SCFD1-217ENST00000555953 GSTM1P09488 218 aa7.16□□□□□ -1.26
SCFD1-217ENST00000555953 AFF3P51826 1226 aaKnown RBP7.16□□□□□ -1.26
SCFD1-217ENST00000555953 ZYXQ15942 572 aaKnown RBP7.16□□□□□ -1.26
SCFD1-217ENST00000555953 AXDND1Q5T1B0 1012 aaPredicted RBP7.16□□□□□ -1.26
SCFD1-217ENST00000555953 LDHDQ86WU2 507 aa7.16□□□□□ -1.26
SCFD1-217ENST00000555953 IGDCC3Q8IVU1 814 aa7.16□□□□□ -1.26
SCFD1-217ENST00000555953 TM9SF2Q99805 663 aa7.16□□□□□ -1.26
SCFD1-217ENST00000555953 PPT2Q9UMR5 302 aa7.16□□□□□ -1.26
SCFD1-217ENST00000555953 MSL3P1P0C860 447 aa7.15□□□□□ -1.26
SCFD1-217ENST00000555953 ZNF445P59923 1031 aa7.15□□□□□ -1.26
SCFD1-217ENST00000555953 MVKQ03426 396 aa7.15□□□□□ -1.26
SCFD1-217ENST00000555953 RPTNQ6XPR3 784 aa7.15□□□□□ -1.26
SCFD1-217ENST00000555953 RUFY4Q6ZNE9 571 aa7.15□□□□□ -1.26
SCFD1-217ENST00000555953 NAT16Q8N8M0 369 aa7.15□□□□□ -1.26
SCFD1-217ENST00000555953 GP6Q9HCN6 339 aa7.15□□□□□ -1.26
SCFD1-217ENST00000555953 FAM86C1Q9NVL1 165 aa7.15□□□□□ -1.26
SCFD1-217ENST00000555953 TMEM62Q0P6H9 643 aa7.14□□□□□ -1.27
SCFD1-217ENST00000555953 CBX2Q14781 532 aaPredicted RBP7.14□□□□□ -1.27
SCFD1-217ENST00000555953 ANKRD39Q53RE8 183 aa7.14□□□□□ -1.27
SCFD1-217ENST00000555953 FBXW10Q5XX13 1052 aa7.14□□□□□ -1.27
SCFD1-217ENST00000555953 CWF19L1Q69YN2 538 aaKnown RBP7.14□□□□□ -1.27
SCFD1-217ENST00000555953 UNC5AQ6ZN44 842 aa7.14□□□□□ -1.27
SCFD1-217ENST00000555953 FAM129CQ86XR2 697 aa7.14□□□□□ -1.27
SCFD1-217ENST00000555953 SMARCC1Q92922 1105 aaPredicted RBP7.14□□□□□ -1.27
SCFD1-217ENST00000555953 BRF1Q92994 677 aa7.14□□□□□ -1.27
SCFD1-217ENST00000555953 RELTQ969Z4 430 aa7.14□□□□□ -1.27
SCFD1-217ENST00000555953 SRRTQ9BXP5 876 aaKnown RBP7.14□□□□□ -1.27
SCFD1-217ENST00000555953 PCDHA5Q9Y5H7 936 aa7.14□□□□□ -1.27
SCFD1-217ENST00000555953 TP53P04637 393 aaPredicted RBP7.13□□□□□ -1.27
SCFD1-217ENST00000555953 GUCY2CP25092 1073 aa7.13□□□□□ -1.27
SCFD1-217ENST00000555953 NCKAP1LP55160 1127 aa7.13□□□□□ -1.27
SCFD1-217ENST00000555953 RACK1P63244 317 aaKnown RBP7.13□□□□□ -1.27
SCFD1-217ENST00000555953 VMACQ2NL98 169 aa7.13□□□□□ -1.27
SCFD1-217ENST00000555953 PLEKHN1Q494U1 663 aaPredicted RBP7.13□□□□□ -1.27
SCFD1-217ENST00000555953 NOL9Q5SY16 702 aaKnown RBP7.13□□□□□ -1.27
SCFD1-217ENST00000555953 LCE5AQ5TCM9 118 aa7.13□□□□□ -1.27
SCFD1-217ENST00000555953 CNKSR3Q6P9H4 555 aa7.13□□□□□ -1.27
SCFD1-217ENST00000555953 RBBP8NLQ8NC74 664 aaPredicted RBP7.13□□□□□ -1.27
SCFD1-217ENST00000555953 XYLT2Q9H1B5 865 aa7.13□□□□□ -1.27
SCFD1-217ENST00000555953 METTL5Q9NRN9 209 aaKnown RBP7.13□□□□□ -1.27
SCFD1-217ENST00000555953 ZNF451Q9Y4E5 1061 aa7.13□□□□□ -1.27
SCFD1-217ENST00000555953 FHOD1Q9Y613 1164 aa7.13□□□□□ -1.27
SCFD1-217ENST00000555953 FGF10O15520 208 aaPredicted RBP7.12□□□□□ -1.27
SCFD1-217ENST00000555953 CD247P20963 164 aa7.12□□□□□ -1.27
SCFD1-217ENST00000555953 HLA-DQA1Q5Y7H0 255 aa7.12□□□□□ -1.27
SCFD1-217ENST00000555953 LSRQ86X29 649 aaPredicted RBP7.12□□□□□ -1.27
SCFD1-217ENST00000555953 FIBCD1Q8N539 461 aa7.12□□□□□ -1.27
SCFD1-217ENST00000555953 KRTAP9-3Q9BYQ3 159 aa7.12□□□□□ -1.27
SCFD1-217ENST00000555953 MAPKAPK2P49137 400 aa7.11□□□□□ -1.27
SCFD1-217ENST00000555953 JAMLQ86YT9 394 aa7.11□□□□□ -1.27
SCFD1-217ENST00000555953 FCRL3Q96P31 734 aaPredicted RBP7.11□□□□□ -1.27
SCFD1-217ENST00000555953 DDX41Q9UJV9 622 aaKnown RBP7.11□□□□□ -1.27
SCFD1-217ENST00000555953 ZNF214Q9UL59 606 aaPredicted RBP7.11□□□□□ -1.27
SCFD1-217ENST00000555953 A0A1W2PQ27 194 aa7.1□□□□□ -1.27
SCFD1-217ENST00000555953 A0A1W2PQ64 194 aa7.1□□□□□ -1.27
SCFD1-217ENST00000555953 A0A1W2PQC6 194 aa7.1□□□□□ -1.27
SCFD1-217ENST00000555953 A0A1W2PQD8 194 aa7.1□□□□□ -1.27
SCFD1-217ENST00000555953 OTOL1A6NHN0 477 aaPredicted RBP7.1□□□□□ -1.27
SCFD1-217ENST00000555953 FOXD2O60548 495 aaPredicted RBP7.1□□□□□ -1.27
SCFD1-217ENST00000555953 BUB1BO60566 1050 aaPredicted RBP7.1□□□□□ -1.27
SCFD1-217ENST00000555953 IFNGR1P15260 489 aa7.1□□□□□ -1.27
SCFD1-217ENST00000555953 CYP2R1Q6VVX0 501 aa7.1□□□□□ -1.27
SCFD1-217ENST00000555953 FEZF2Q8TBJ5 459 aa7.1□□□□□ -1.27
SCFD1-217ENST00000555953 RNF34Q969K3 372 aa7.1□□□□□ -1.27
SCFD1-217ENST00000555953 PWWP2AQ96N64 755 aa7.1□□□□□ -1.27
SCFD1-217ENST00000555953 RTEL1Q9NZ71 1219 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms