RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 SPRYD7Q5W111 196 aa8.02□□□□□ -1.13
SLIRP-204ENST00000555890 VPS37DQ86XT2 251 aa8.02□□□□□ -1.13
SLIRP-204ENST00000555890 ANKS1AQ92625 1134 aa8.02□□□□□ -1.13
SLIRP-204ENST00000555890 CELF1Q92879 486 aaKnown RBP8.02□□□□□ -1.13
SLIRP-204ENST00000555890 TNPO1Q92973 898 aaKnown RBP8.02□□□□□ -1.13
SLIRP-204ENST00000555890 OSBP2Q969R2 916 aa8.02□□□□□ -1.13
SLIRP-204ENST00000555890 CHMP4CQ96CF2 233 aa8.02□□□□□ -1.13
SLIRP-204ENST00000555890 TRIM47Q96LD4 638 aa8.02□□□□□ -1.13
SLIRP-204ENST00000555890 PIH1D3Q9NQM4 214 aaKnown RBP8.02□□□□□ -1.13
SLIRP-204ENST00000555890 FAM86C1Q9NVL1 165 aa8.02□□□□□ -1.13
SLIRP-204ENST00000555890 VPS9D1Q9Y2B5 631 aa8.02□□□□□ -1.13
SLIRP-204ENST00000555890 SOWAHBA6NEL2 793 aa8.01□□□□□ -1.13
SLIRP-204ENST00000555890 CHGBP05060 677 aa8.01□□□□□ -1.13
SLIRP-204ENST00000555890 CYP21A2P08686 494 aa8.01□□□□□ -1.13
SLIRP-204ENST00000555890 VIL1P09327 827 aaKnown RBP8.01□□□□□ -1.13
SLIRP-204ENST00000555890 PDE6AP16499 860 aa8.01□□□□□ -1.13
SLIRP-204ENST00000555890 ATP2B4P23634 1241 aa8.01□□□□□ -1.13
SLIRP-204ENST00000555890 RPS12P25398 132 aaKnown RBP8.01□□□□□ -1.13
SLIRP-204ENST00000555890 ZNF280AP59817 542 aaPredicted RBP8.01□□□□□ -1.13
SLIRP-204ENST00000555890 GRAPQ13588 217 aa8.01□□□□□ -1.13
SLIRP-204ENST00000555890 NCOA4Q13772 614 aa8.01□□□□□ -1.13
SLIRP-204ENST00000555890 RASGRF1Q13972 1273 aa8.01□□□□□ -1.13
SLIRP-204ENST00000555890 IMMTQ16891 758 aaKnown RBP8.01□□□□□ -1.13
SLIRP-204ENST00000555890 SWI5Q1ZZU3 235 aa8.01□□□□□ -1.13
SLIRP-204ENST00000555890 ANGEL2Q5VTE6 544 aaKnown RBP8.01□□□□□ -1.13
SLIRP-204ENST00000555890 BRICD5Q6PL45 260 aa8.01□□□□□ -1.13
SLIRP-204ENST00000555890 PI16Q6UXB8 463 aa8.01□□□□□ -1.13
SLIRP-204ENST00000555890 ASCL5Q7RTU5 278 aa8.01□□□□□ -1.13
SLIRP-204ENST00000555890 RNF135Q8IUD6 432 aa8.01□□□□□ -1.13
SLIRP-204ENST00000555890 ANKMY2Q8IV38 441 aa8.01□□□□□ -1.13
SLIRP-204ENST00000555890 ZGPATQ8N5A5 531 aaKnown RBP8.01□□□□□ -1.13
SLIRP-204ENST00000555890 GRAPLQ8TC17 118 aaPredicted RBP8.01□□□□□ -1.13
SLIRP-204ENST00000555890 RMDN1Q96DB5 314 aa8.01□□□□□ -1.13
SLIRP-204ENST00000555890 DBNDD1Q9H9R9 158 aa8.01□□□□□ -1.13
SLIRP-204ENST00000555890 MAP10Q9P2G4 905 aa8.01□□□□□ -1.13
SLIRP-204ENST00000555890 LRP2BPQ9P2M1 347 aa8.01□□□□□ -1.13
SLIRP-204ENST00000555890 DENND2AQ9ULE3 1009 aa8.01□□□□□ -1.13
SLIRP-204ENST00000555890 COL4A1P02462 1669 aa8.01□□□□□ -1.13
SLIRP-204ENST00000555890 SSC5DA1L4H1 1573 aa8.01□□□□□ -1.13
SLIRP-204ENST00000555890 ZNF532Q9HCE3 1301 aa8.01□□□□□ -1.13
SLIRP-204ENST00000555890 DNAH14Q0VDD8 3507 aa8□□□□□ -1.13
SLIRP-204ENST00000555890 PROB1E7EW31 1015 aa8□□□□□ -1.13
SLIRP-204ENST00000555890 ZNF213O14771 459 aa8□□□□□ -1.13
SLIRP-204ENST00000555890 GPAA1O43292 621 aa8□□□□□ -1.13
SLIRP-204ENST00000555890 APPP05067 770 aa8□□□□□ -1.13
SLIRP-204ENST00000555890 CPA1P15085 419 aa8□□□□□ -1.13
SLIRP-204ENST00000555890 GNAT2P19087 354 aa8□□□□□ -1.13
SLIRP-204ENST00000555890 HIBADHP31937 336 aaKnown RBP8□□□□□ -1.13
SLIRP-204ENST00000555890 FGD1P98174 961 aa8□□□□□ -1.13
SLIRP-204ENST00000555890 PTK2Q05397 1052 aa8□□□□□ -1.13
SLIRP-204ENST00000555890 TCF15Q12870 199 aa8□□□□□ -1.13
SLIRP-204ENST00000555890 SHHQ15465 462 aa8□□□□□ -1.13
SLIRP-204ENST00000555890 SKOR2Q2VWA4 1001 aaPredicted RBP8□□□□□ -1.13
SLIRP-204ENST00000555890 MAP7D1Q3KQU3 841 aa8□□□□□ -1.13
SLIRP-204ENST00000555890 LDLRAD1Q5T700 205 aa8□□□□□ -1.13
SLIRP-204ENST00000555890 TMED8Q6PL24 325 aaPredicted RBP8□□□□□ -1.13
SLIRP-204ENST00000555890 BLOC1S3Q6QNY0 202 aa8□□□□□ -1.13
SLIRP-204ENST00000555890 RNF19BQ6ZMZ0 732 aa8□□□□□ -1.13
SLIRP-204ENST00000555890 DHX32Q7L7V1 743 aaKnown RBP8□□□□□ -1.13
SLIRP-204ENST00000555890 PLPP7Q8NBV4 271 aa8□□□□□ -1.13
SLIRP-204ENST00000555890 ARMC2Q8NEN0 867 aa8□□□□□ -1.13
SLIRP-204ENST00000555890 DIS3LQ8TF46 1054 aaKnown RBP8□□□□□ -1.13
SLIRP-204ENST00000555890 GPKOWQ92917 476 aaPredicted RBP eCLIP8□□□□□ -1.13
SLIRP-204ENST00000555890 ZFRQ96KR1 1074 aaKnown RBP8□□□□□ -1.13
SLIRP-204ENST00000555890 GMLQ99445 158 aa8□□□□□ -1.13
SLIRP-204ENST00000555890 PUS7LQ9H0K6 701 aaKnown RBP8□□□□□ -1.13
SLIRP-204ENST00000555890 UNC93B1Q9H1C4 597 aa8□□□□□ -1.13
SLIRP-204ENST00000555890 ZNF576Q9H609 170 aa8□□□□□ -1.13
SLIRP-204ENST00000555890 CD320Q9NPF0 282 aa8□□□□□ -1.13
SLIRP-204ENST00000555890 POLLQ9UGP5 575 aa8□□□□□ -1.13
SLIRP-204ENST00000555890 SMC3Q9UQE7 1217 aa8□□□□□ -1.13
SLIRP-204ENST00000555890 LEMD3Q9Y2U8 911 aa8□□□□□ -1.13
SLIRP-204ENST00000555890 ZNF804BA4D1E1 1349 aa8□□□□□ -1.13
SLIRP-204ENST00000555890 PDS5AQ29RF7 1337 aaKnown RBP8□□□□□ -1.13
SLIRP-204ENST00000555890 FAM186AA6NE01 2351 aa7.99□□□□□ -1.13
SLIRP-204ENST00000555890 WDR87Q6ZQQ6 2873 aa7.99□□□□□ -1.13
SLIRP-204ENST00000555890 TCRBV5S4A2TA0A5A2 114 aa7.99□□□□□ -1.13
SLIRP-204ENST00000555890 LRRC37AA6NMS7 1700 aa7.99□□□□□ -1.13
SLIRP-204ENST00000555890 E7EWF7 191 aa7.99□□□□□ -1.13
SLIRP-204ENST00000555890 SNAP23O00161 211 aa7.99□□□□□ -1.13
SLIRP-204ENST00000555890 FGAP02671 866 aa7.99□□□□□ -1.13
SLIRP-204ENST00000555890 JUNDP17535 347 aa7.99□□□□□ -1.13
SLIRP-204ENST00000555890 GYG1P46976 350 aa7.99□□□□□ -1.13
SLIRP-204ENST00000555890 MARSP56192 900 aaKnown RBP7.99□□□□□ -1.13
SLIRP-204ENST00000555890 PUM1Q14671 1186 aaKnown RBP eCLIP7.99□□□□□ -1.135e-7■■■□□ 19
SLIRP-204ENST00000555890 PDXDC2PQ6P474 469 aa7.99□□□□□ -1.13
SLIRP-204ENST00000555890 CLEC17AQ6ZS10 378 aa7.99□□□□□ -1.13
SLIRP-204ENST00000555890 HFE2Q6ZVN8 426 aa7.99□□□□□ -1.13
SLIRP-204ENST00000555890 TMC4Q7Z404 712 aa7.99□□□□□ -1.13
SLIRP-204ENST00000555890 FBXO33Q7Z6M2 555 aa7.99□□□□□ -1.13
SLIRP-204ENST00000555890 PHTF2Q8N3S3 785 aa7.99□□□□□ -1.13
SLIRP-204ENST00000555890 MAGEB6Q8N7X4 407 aa7.99□□□□□ -1.13
SLIRP-204ENST00000555890 RAET1EQ8TD07 263 aa7.99□□□□□ -1.13
SLIRP-204ENST00000555890 ATOH1Q92858 354 aaPredicted RBP7.99□□□□□ -1.13
SLIRP-204ENST00000555890 FAM84BQ96KN1 310 aaPredicted RBP7.99□□□□□ -1.13
SLIRP-204ENST00000555890 DEFB118Q96PH6 123 aa7.99□□□□□ -1.13
SLIRP-204ENST00000555890 NACAP1Q9BZK3 213 aa7.99□□□□□ -1.13
SLIRP-204ENST00000555890 RAI14Q9P0K7 980 aa7.99□□□□□ -1.13
SLIRP-204ENST00000555890 ANKIB1Q9P2G1 1089 aa7.99□□□□□ -1.13
SLIRP-204ENST00000555890 LAMB1P07942 1786 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms