RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 ZNF713Q8N859 430 aaPredicted RBP14.42□□□□□ -0.1
SHMT2-221ENST00000555773 SMCR8Q8TEV9 937 aaPredicted RBP14.42□□□□□ -0.1
SHMT2-221ENST00000555773 PHKBQ93100 1093 aa14.42□□□□□ -0.1
SHMT2-221ENST00000555773 PIGSQ96S52 555 aa14.42□□□□□ -0.1
SHMT2-221ENST00000555773 ZFYVE28Q9HCC9 887 aa14.42□□□□□ -0.1
SHMT2-221ENST00000555773 ORC3Q9UBD5 711 aaPredicted RBP14.42□□□□□ -0.1
SHMT2-221ENST00000555773 DAXXQ9UER7 740 aaPredicted RBP14.42□□□□□ -0.1
SHMT2-221ENST00000555773 SMC3Q9UQE7 1217 aa14.42□□□□□ -0.1
SHMT2-221ENST00000555773 KIF3AQ9Y496 699 aa14.42□□□□□ -0.1
SHMT2-221ENST00000555773 MYH4Q9Y623 1939 aa14.42□□□□□ -0.1
SHMT2-221ENST00000555773 CA12O43570 354 aa14.41□□□□□ -0.1
SHMT2-221ENST00000555773 ICAM1P05362 532 aa14.41□□□□□ -0.1
SHMT2-221ENST00000555773 CYP2C8P10632 490 aa14.41□□□□□ -0.1
SHMT2-221ENST00000555773 QRICH1Q2TAL8 776 aa14.41□□□□□ -0.1
SHMT2-221ENST00000555773 FBXO11Q86XK2 927 aa14.41□□□□□ -0.1
SHMT2-221ENST00000555773 HOMER1Q86YM7 354 aa14.41□□□□□ -0.1
SHMT2-221ENST00000555773 FAM177A1Q8N128 213 aaPredicted RBP14.41□□□□□ -0.1
SHMT2-221ENST00000555773 REPS2Q8NFH8 660 aa14.41□□□□□ -0.1
SHMT2-221ENST00000555773 AMNQ9BXJ7 453 aa14.41□□□□□ -0.1
SHMT2-221ENST00000555773 RBPJLQ9UBG7 517 aa14.41□□□□□ -0.1
SHMT2-221ENST00000555773 TLR2O60603 784 aa14.4□□□□□ -0.1
SHMT2-221ENST00000555773 JAK2O60674 1132 aa14.4□□□□□ -0.1
SHMT2-221ENST00000555773 SCG2P13521 617 aa14.4□□□□□ -0.1
SHMT2-221ENST00000555773 FDPSP14324 419 aaKnown RBP14.4□□□□□ -0.1
SHMT2-221ENST00000555773 XBP1P17861 261 aa14.4□□□□□ -0.1
SHMT2-221ENST00000555773 STAT3P40763 770 aa14.4□□□□□ -0.1
SHMT2-221ENST00000555773 MAP2K1Q02750 393 aaPredicted RBP14.4□□□□□ -0.1
SHMT2-221ENST00000555773 TMEM132BQ14DG7 1078 aa14.4□□□□□ -0.1
SHMT2-221ENST00000555773 PKN1Q16512 942 aa14.4□□□□□ -0.1
SHMT2-221ENST00000555773 TKFCQ3LXA3 575 aa14.4□□□□□ -0.1
SHMT2-221ENST00000555773 FAM184AQ8NB25 1140 aa14.4□□□□□ -0.1
SHMT2-221ENST00000555773 RGS22Q8NE09 1264 aa14.4□□□□□ -0.1
SHMT2-221ENST00000555773 GPRC5AQ8NFJ5 357 aa14.4□□□□□ -0.1
SHMT2-221ENST00000555773 PIBF1Q8WXW3 757 aa14.4□□□□□ -0.1
SHMT2-221ENST00000555773 DDX11Q96FC9 970 aa14.4□□□□□ -0.1
SHMT2-221ENST00000555773 CFHR5Q9BXR6 569 aa14.4□□□□□ -0.1
SHMT2-221ENST00000555773 TEX13BQ9BXU2 312 aa14.4□□□□□ -0.1
SHMT2-221ENST00000555773 CWC22Q9HCG8 908 aaKnown RBP14.4□□□□□ -0.1
SHMT2-221ENST00000555773 SLC25A27O95847 323 aa14.39□□□□□ -0.11
SHMT2-221ENST00000555773 PDIA4P13667 645 aaKnown RBP14.39□□□□□ -0.11
SHMT2-221ENST00000555773 COPB2P35606 906 aa14.39□□□□□ -0.11
SHMT2-221ENST00000555773 SNAP25P60880 206 aa14.39□□□□□ -0.11
SHMT2-221ENST00000555773 CCNA1P78396 465 aa14.39□□□□□ -0.11
SHMT2-221ENST00000555773 CCDC174Q6PII3 467 aa14.39□□□□□ -0.11
SHMT2-221ENST00000555773 POTEEQ6S8J3 1075 aa14.39□□□□□ -0.11
SHMT2-221ENST00000555773 TEX2Q8IWB9 1127 aa14.39□□□□□ -0.11
SHMT2-221ENST00000555773 CPXCR1Q8N123 301 aa14.39□□□□□ -0.11
SHMT2-221ENST00000555773 DNAJC5GQ8N7S2 189 aa14.39□□□□□ -0.11
SHMT2-221ENST00000555773 CCDC12Q8WUD4 166 aaPredicted RBP14.39□□□□□ -0.11
SHMT2-221ENST00000555773 MAF1Q9H063 256 aa14.39□□□□□ -0.11
SHMT2-221ENST00000555773 RAVER2Q9HCJ3 691 aaKnown RBP14.39□□□□□ -0.11
SHMT2-221ENST00000555773 SH3GLB2Q9NR46 395 aa14.39□□□□□ -0.11
SHMT2-221ENST00000555773 BARHL2Q9NY43 387 aa14.39□□□□□ -0.11
SHMT2-221ENST00000555773 BTBD7Q9P203 1132 aa14.39□□□□□ -0.11
SHMT2-221ENST00000555773 MORF4L1Q9UBU8 362 aa14.39□□□□□ -0.11
SHMT2-221ENST00000555773 ZNF214Q9UL59 606 aaPredicted RBP14.39□□□□□ -0.11
SHMT2-221ENST00000555773 PCDHA1Q9Y5I3 950 aa14.39□□□□□ -0.11
SHMT2-221ENST00000555773 ZNF536O15090 1300 aa14.39□□□□□ -0.11
SHMT2-221ENST00000555773 hCG_1642624A0A1W2PR95 340 aa14.38□□□□□ -0.11
SHMT2-221ENST00000555773 PPFIA3O75145 1194 aa14.38□□□□□ -0.11
SHMT2-221ENST00000555773 CNMDO75829 334 aa14.38□□□□□ -0.11
SHMT2-221ENST00000555773 PDCP20941 246 aa14.38□□□□□ -0.11
SHMT2-221ENST00000555773 GJB2P29033 226 aa14.38□□□□□ -0.11
SHMT2-221ENST00000555773 FAM110CQ1W6H9 321 aa14.38□□□□□ -0.11
SHMT2-221ENST00000555773 C17orf99Q6UX52 265 aa14.38□□□□□ -0.11
SHMT2-221ENST00000555773 RIOX2Q8IUF8 465 aa14.38□□□□□ -0.11
SHMT2-221ENST00000555773 AGBL1Q96MI9 1066 aa14.38□□□□□ -0.11
SHMT2-221ENST00000555773 ALG1Q9BT22 464 aa14.38□□□□□ -0.11
SHMT2-221ENST00000555773 SPATC1LQ9H0A9 340 aa14.38□□□□□ -0.11
SHMT2-221ENST00000555773 RNF186Q9NXI6 227 aa14.38□□□□□ -0.11
SHMT2-221ENST00000555773 CCPG1Q9ULG6 757 aa14.38□□□□□ -0.11
SHMT2-221ENST00000555773 MRPL11Q9Y3B7 192 aaKnown RBP14.38□□□□□ -0.11
SHMT2-221ENST00000555773 ABCB11O95342 1321 aa14.38□□□□□ -0.11
SHMT2-221ENST00000555773 PPP1R11O60927 126 aaPredicted RBP14.37□□□□□ -0.11
SHMT2-221ENST00000555773 ERVK-9P63128 1117 aa14.37□□□□□ -0.11
SHMT2-221ENST00000555773 ERVK-24P63145 666 aa14.37□□□□□ -0.11
SHMT2-221ENST00000555773 CRHR2Q13324 411 aa14.37□□□□□ -0.11
SHMT2-221ENST00000555773 PLS1Q14651 629 aa14.37□□□□□ -0.11
SHMT2-221ENST00000555773 Q3C1V9 767 aa14.37□□□□□ -0.11
SHMT2-221ENST00000555773 SNRNP48Q6IEG0 339 aaKnown RBP14.37□□□□□ -0.11
SHMT2-221ENST00000555773 PPP1R18Q6NYC8 613 aa14.37□□□□□ -0.11
SHMT2-221ENST00000555773 HEATR3Q7Z4Q2 680 aa14.37□□□□□ -0.11
SHMT2-221ENST00000555773 SAMD3Q8N6K7 520 aa14.37□□□□□ -0.11
SHMT2-221ENST00000555773 ANKRD13CQ8N6S4 541 aa14.37□□□□□ -0.11
SHMT2-221ENST00000555773 SHCBP1Q8NEM2 672 aa14.37□□□□□ -0.11
SHMT2-221ENST00000555773 CHST13Q8NET6 341 aa14.37□□□□□ -0.11
SHMT2-221ENST00000555773 IPO9Q96P70 1041 aaKnown RBP14.37□□□□□ -0.11
SHMT2-221ENST00000555773 PAGR1Q9BTK6 254 aa14.37□□□□□ -0.11
SHMT2-221ENST00000555773 GLT8D2Q9H1C3 349 aa14.37□□□□□ -0.11
SHMT2-221ENST00000555773 TXNRD2Q9NNW7 524 aa14.37□□□□□ -0.11
SHMT2-221ENST00000555773 SAGE1Q9NXZ1 904 aa14.37□□□□□ -0.11
SHMT2-221ENST00000555773 FBXO40Q9UH90 709 aa14.37□□□□□ -0.11
SHMT2-221ENST00000555773 ADGRA2Q96PE1 1338 aa14.37□□□□□ -0.11
SHMT2-221ENST00000555773 LOC285556D6RIA3 1793 aa14.37□□□□□ -0.11
SHMT2-221ENST00000555773 STXBP3O00186 592 aa14.36□□□□□ -0.11
SHMT2-221ENST00000555773 TRPA1O75762 1119 aa14.36□□□□□ -0.11
SHMT2-221ENST00000555773 BCRP11274 1271 aa14.36□□□□□ -0.11
SHMT2-221ENST00000555773 TRIM29Q14134 588 aa14.36□□□□□ -0.11
SHMT2-221ENST00000555773 LARP1BQ659C4 914 aaKnown RBP14.36□□□□□ -0.11
SHMT2-221ENST00000555773 WWC2Q6AWC2 1192 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms