RNA–Protein interactions for RNA: ENST00000555573.5

KTN1-223, Transcript of kinectin 1, humanhuman

TSL 2 BASIC

Gene KTN1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-223ENST00000555573 UBE2FQ969M7 185 aa6.78□□□□□ -1.32
KTN1-223ENST00000555573 ZC3H7BQ9UGR2 993 aaKnown RBP6.78□□□□□ -1.32
KTN1-223ENST00000555573 STXBP3O00186 592 aa6.77□□□□□ -1.33
KTN1-223ENST00000555573 CD3EP07766 207 aa6.77□□□□□ -1.33
KTN1-223ENST00000555573 TPP2P29144 1249 aaPredicted RBP6.77□□□□□ -1.33
KTN1-223ENST00000555573 CLCN7P51798 805 aa6.77□□□□□ -1.33
KTN1-223ENST00000555573 GFRA1P56159 465 aa6.77□□□□□ -1.33
KTN1-223ENST00000555573 CYP4F3Q08477 520 aa6.77□□□□□ -1.33
KTN1-223ENST00000555573 NETO1Q8TDF5 533 aa6.77□□□□□ -1.33
KTN1-223ENST00000555573 IPO9Q96P70 1041 aaKnown RBP6.77□□□□□ -1.33
KTN1-223ENST00000555573 NCOA5Q9HCD5 579 aaKnown RBP6.77□□□□□ -1.33
KTN1-223ENST00000555573 SEMA3GQ9NS98 782 aa6.77□□□□□ -1.33
KTN1-223ENST00000555573 CCDC163A0A0D9SF12 145 aa6.76□□□□□ -1.33
KTN1-223ENST00000555573 SNRPB2P08579 225 aaKnown RBP6.76□□□□□ -1.33
KTN1-223ENST00000555573 FOSL1P15407 271 aa6.76□□□□□ -1.33
KTN1-223ENST00000555573 HOXA10P31260 410 aaPredicted RBP6.76□□□□□ -1.33
KTN1-223ENST00000555573 HOXC12P31275 282 aa6.76□□□□□ -1.33
KTN1-223ENST00000555573 KCNJ6P48051 423 aa6.76□□□□□ -1.33
KTN1-223ENST00000555573 POU4F1Q01851 419 aa6.76□□□□□ -1.33
KTN1-223ENST00000555573 IFI16Q16666 785 aaKnown RBP6.76□□□□□ -1.33
KTN1-223ENST00000555573 PRSS53Q2L4Q9 553 aa6.76□□□□□ -1.33
KTN1-223ENST00000555573 GAB4Q2WGN9 574 aa6.76□□□□□ -1.33
KTN1-223ENST00000555573 SYNPOQ8N3V7 929 aa6.76□□□□□ -1.33
KTN1-223ENST00000555573 TMEM145Q8NBT3 493 aa6.76□□□□□ -1.33
KTN1-223ENST00000555573 KRTAP9-9Q9BYP9 154 aa6.76□□□□□ -1.33
KTN1-223ENST00000555573 KRTAP9-4Q9BYQ2 154 aa6.76□□□□□ -1.33
KTN1-223ENST00000555573 SLKQ9H2G2 1235 aaPredicted RBP6.76□□□□□ -1.33
KTN1-223ENST00000555573 CYP26B1Q9NR63 512 aa6.76□□□□□ -1.33
KTN1-223ENST00000555573 RAPGEF3O95398 923 aa6.76□□□□□ -1.33
KTN1-223ENST00000555573 IGHA1P01876 353 aa6.76□□□□□ -1.33
KTN1-223ENST00000555573 IFNGR1P15260 489 aa6.76□□□□□ -1.33
KTN1-223ENST00000555573 VAV1P15498 845 aa6.76□□□□□ -1.33
KTN1-223ENST00000555573 BMP8BP34820 402 aa6.76□□□□□ -1.33
KTN1-223ENST00000555573 ECI1P42126 302 aa6.76□□□□□ -1.33
KTN1-223ENST00000555573 SUMO1P63165 101 aaKnown RBP6.76□□□□□ -1.33
KTN1-223ENST00000555573 SCRN1Q12765 414 aa6.76□□□□□ -1.33
KTN1-223ENST00000555573 THAP5Q7Z6K1 395 aa6.76□□□□□ -1.33
KTN1-223ENST00000555573 SLC51AQ86UW1 340 aa6.76□□□□□ -1.33
KTN1-223ENST00000555573 USHBP1Q8N6Y0 703 aa6.76□□□□□ -1.33
KTN1-223ENST00000555573 C1orf159Q96HA4 380 aa6.76□□□□□ -1.33
KTN1-223ENST00000555573 FCRL3Q96P31 734 aaPredicted RBP6.76□□□□□ -1.33
KTN1-223ENST00000555573 SLC12A9Q9BXP2 914 aa6.76□□□□□ -1.33
KTN1-223ENST00000555573 BLACEA4D250 179 aa6.75□□□□□ -1.33
KTN1-223ENST00000555573 AURKAO14965 403 aa6.75□□□□□ -1.33
KTN1-223ENST00000555573 TGFB1P01137 390 aa6.75□□□□□ -1.33
KTN1-223ENST00000555573 SCG5P05408 212 aa6.75□□□□□ -1.33
KTN1-223ENST00000555573 MAP4K2Q12851 820 aa6.75□□□□□ -1.33
KTN1-223ENST00000555573 DALRD3Q5D0E6 543 aaKnown RBP6.75□□□□□ -1.33
KTN1-223ENST00000555573 KCTD13Q8WZ19 329 aa6.75□□□□□ -1.33
KTN1-223ENST00000555573 CCDC140Q96MF4 163 aa6.75□□□□□ -1.33
KTN1-223ENST00000555573 FOXP3Q9BZS1 431 aa6.75□□□□□ -1.33
KTN1-223ENST00000555573 ATP13A1Q9HD20 1204 aa6.75□□□□□ -1.33
KTN1-223ENST00000555573 PITPNM2Q9BZ72 1349 aa6.74□□□□□ -1.33
KTN1-223ENST00000555573 TMEM265A0A087WTH1 108 aa6.74□□□□□ -1.33
KTN1-223ENST00000555573 SYPP08247 313 aa6.74□□□□□ -1.33
KTN1-223ENST00000555573 FURINP09958 794 aa6.74□□□□□ -1.33
KTN1-223ENST00000555573 C6orf222P0C671 652 aaPredicted RBP6.74□□□□□ -1.33
KTN1-223ENST00000555573 NTRK3Q16288 839 aa6.74□□□□□ -1.33
KTN1-223ENST00000555573 DENND5AQ6IQ26 1287 aa6.74□□□□□ -1.33
KTN1-223ENST00000555573 LINC00116Q8NCU8 138 aa6.74□□□□□ -1.33
KTN1-223ENST00000555573 CLUHP3Q96NS8 147 aa6.74□□□□□ -1.33
KTN1-223ENST00000555573 GPRC5CQ9NQ84 441 aa6.74□□□□□ -1.33
KTN1-223ENST00000555573 DUSP13Q9UII6 198 aa6.74□□□□□ -1.33
KTN1-223ENST00000555573 TCFL5Q9UL49 500 aa6.74□□□□□ -1.33
KTN1-223ENST00000555573 SNX11Q9Y5W9 270 aa6.74□□□□□ -1.33
KTN1-223ENST00000555573 BACE2Q9Y5Z0 518 aa6.74□□□□□ -1.33
KTN1-223ENST00000555573 DNAJC25-GNG10A0A024R161 153 aa6.73□□□□□ -1.33
KTN1-223ENST00000555573 C2orf71A6NGG8 1288 aa6.73□□□□□ -1.33
KTN1-223ENST00000555573 PLD2O14939 933 aa6.73□□□□□ -1.33
KTN1-223ENST00000555573 ZNF205O95201 554 aa6.73□□□□□ -1.33
KTN1-223ENST00000555573 THBDP07204 575 aa6.73□□□□□ -1.33
KTN1-223ENST00000555573 NCLP19338 710 aaKnown RBP6.73□□□□□ -1.33
KTN1-223ENST00000555573 PCBP3P57721 371 aaKnown RBP6.73□□□□□ -1.33
KTN1-223ENST00000555573 PABPC4Q13310 644 aaKnown RBP eCLIP6.73□□□□□ -1.336e-10■■■■□ 26.2
KTN1-223ENST00000555573 PRSS36Q5K4E3 855 aa6.73□□□□□ -1.33
KTN1-223ENST00000555573 RTP2Q5QGT7 225 aa6.73□□□□□ -1.33
KTN1-223ENST00000555573 SLC35F1Q5T1Q4 408 aa6.73□□□□□ -1.33
KTN1-223ENST00000555573 KREMEN2Q8NCW0 462 aa6.73□□□□□ -1.33
KTN1-223ENST00000555573 COPS5Q92905 334 aa6.73□□□□□ -1.33
KTN1-223ENST00000555573 PCDHA11Q9Y5I1 949 aa6.73□□□□□ -1.33
KTN1-223ENST00000555573 FKTNO75072 461 aa6.73□□□□□ -1.33
KTN1-223ENST00000555573 CPP00450 1065 aa6.73□□□□□ -1.33
KTN1-223ENST00000555573 GSTM1P09488 218 aa6.73□□□□□ -1.33
KTN1-223ENST00000555573 NOP2P46087 812 aaKnown RBP6.73□□□□□ -1.33
KTN1-223ENST00000555573 RNF187Q5TA31 235 aaPredicted RBP6.73□□□□□ -1.33
KTN1-223ENST00000555573 FILIP1Q7Z7B0 1213 aa6.73□□□□□ -1.33
KTN1-223ENST00000555573 CREG2Q8IUH2 290 aa6.73□□□□□ -1.33
KTN1-223ENST00000555573 FRS2Q8WU20 508 aa6.73□□□□□ -1.33
KTN1-223ENST00000555573 PUS7Q96PZ0 661 aaKnown RBP6.73□□□□□ -1.33
KTN1-223ENST00000555573 PLAAQ9Y263 795 aa6.73□□□□□ -1.33
KTN1-223ENST00000555573 ESR1P03372 595 aa6.72□□□□□ -1.33
KTN1-223ENST00000555573 LTKP29376 864 aa6.72□□□□□ -1.33
KTN1-223ENST00000555573 USP53Q70EK8 1073 aa6.72□□□□□ -1.33
KTN1-223ENST00000555573 TMPRSS7Q7RTY8 843 aa6.72□□□□□ -1.33
KTN1-223ENST00000555573 DHX37Q8IY37 1157 aaKnown RBP6.72□□□□□ -1.33
KTN1-223ENST00000555573 NPLOC4Q8TAT6 608 aa6.72□□□□□ -1.33
KTN1-223ENST00000555573 NINJ1Q92982 152 aa6.72□□□□□ -1.33
KTN1-223ENST00000555573 GPATCH3Q96I76 525 aa6.72□□□□□ -1.33
KTN1-223ENST00000555573 HRASLS5Q96KN8 279 aa6.72□□□□□ -1.33
KTN1-223ENST00000555573 MRPL4Q9BYD3 311 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms