RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 PHIPQ8WWQ0 1821 aa11.73□□□□□ -0.53
SRP54-208ENST00000555557 FAM205CA6NFA0 338 aa11.73□□□□□ -0.53
SRP54-208ENST00000555557 FIBPO43427 364 aa11.73□□□□□ -0.53
SRP54-208ENST00000555557 PLA2G6O60733 806 aa11.73□□□□□ -0.53
SRP54-208ENST00000555557 SH3D19Q5HYK7 790 aa11.73□□□□□ -0.53
SRP54-208ENST00000555557 GADL1Q6ZQY3 521 aa11.73□□□□□ -0.53
SRP54-208ENST00000555557 NOSTRINQ8IVI9 506 aa11.73□□□□□ -0.53
SRP54-208ENST00000555557 PRPF38AQ8NAV1 312 aaKnown RBP11.73□□□□□ -0.53
SRP54-208ENST00000555557 WNK4Q96J92 1243 aa11.73□□□□□ -0.53
SRP54-208ENST00000555557 FOXP1Q9H334 677 aaPredicted RBP11.73□□□□□ -0.53
SRP54-208ENST00000555557 PAPPA2Q9BXP8 1791 aa11.73□□□□□ -0.53
SRP54-208ENST00000555557 FKBP1BP68106 108 aa11.72□□□□□ -0.53
SRP54-208ENST00000555557 PPIL2Q13356 520 aa11.72□□□□□ -0.53
SRP54-208ENST00000555557 NBR1Q14596 966 aa11.72□□□□□ -0.53
SRP54-208ENST00000555557 MYSM1Q5VVJ2 828 aa11.72□□□□□ -0.53
SRP54-208ENST00000555557 FBXO11Q86XK2 927 aa11.72□□□□□ -0.53
SRP54-208ENST00000555557 BLIDQ8IZY5 108 aa11.72□□□□□ -0.53
SRP54-208ENST00000555557 CCDC148Q8NFR7 591 aa11.72□□□□□ -0.53
SRP54-208ENST00000555557 AMNQ9BXJ7 453 aa11.72□□□□□ -0.53
SRP54-208ENST00000555557 ZMYND12Q9H0C1 365 aa11.72□□□□□ -0.53
SRP54-208ENST00000555557 RANBP17Q9H2T7 1088 aaKnown RBP11.72□□□□□ -0.53
SRP54-208ENST00000555557 PCDHA4Q9UN74 947 aa11.72□□□□□ -0.53
SRP54-208ENST00000555557 A0A0G2JLL6 359 aaPredicted RBP11.72□□□□□ -0.53
SRP54-208ENST00000555557 CXCL11O14625 94 aa11.72□□□□□ -0.53
SRP54-208ENST00000555557 PRPF40AO75400 957 aaKnown RBP11.72□□□□□ -0.53
SRP54-208ENST00000555557 ATP2B1P20020 1258 aa11.72□□□□□ -0.53
SRP54-208ENST00000555557 CALML3P27482 149 aa11.72□□□□□ -0.53
SRP54-208ENST00000555557 TPRNQ4KMQ1 711 aa11.72□□□□□ -0.53
SRP54-208ENST00000555557 CATSPERGQ6ZRH7 1159 aa11.72□□□□□ -0.53
SRP54-208ENST00000555557 BRAPQ7Z569 592 aa11.72□□□□□ -0.53
SRP54-208ENST00000555557 PRRT2Q7Z6L0 340 aaPredicted RBP11.72□□□□□ -0.53
SRP54-208ENST00000555557 CPXCR1Q8N123 301 aa11.72□□□□□ -0.53
SRP54-208ENST00000555557 CCDC12Q8WUD4 166 aaPredicted RBP11.72□□□□□ -0.53
SRP54-208ENST00000555557 TNFRSF25Q93038 417 aa11.72□□□□□ -0.53
SRP54-208ENST00000555557 ATG4CQ96DT6 458 aa11.72□□□□□ -0.53
SRP54-208ENST00000555557 USP28Q96RU2 1077 aa11.72□□□□□ -0.53
SRP54-208ENST00000555557 BRMS1Q9HCU9 246 aa11.72□□□□□ -0.53
SRP54-208ENST00000555557 PPP1R9AQ9ULJ8 1098 aa11.72□□□□□ -0.53
SRP54-208ENST00000555557 PCDHA6Q9UN73 950 aa11.72□□□□□ -0.53
SRP54-208ENST00000555557 KCNH4Q9UQ05 1017 aa11.72□□□□□ -0.53
SRP54-208ENST00000555557 PCDHA8Q9Y5H6 950 aa11.72□□□□□ -0.53
SRP54-208ENST00000555557 hCG_1984214I3L0E3 225 aa11.71□□□□□ -0.53
SRP54-208ENST00000555557 HUNKP57058 714 aa11.71□□□□□ -0.53
SRP54-208ENST00000555557 KRT85P78386 507 aa11.71□□□□□ -0.53
SRP54-208ENST00000555557 PIK3AP1Q6ZUJ8 805 aa11.71□□□□□ -0.53
SRP54-208ENST00000555557 ZNF713Q8N859 430 aaPredicted RBP11.71□□□□□ -0.53
SRP54-208ENST00000555557 AGBL1Q96MI9 1066 aa11.71□□□□□ -0.53
SRP54-208ENST00000555557 C6orf50Q9HD87 102 aa11.71□□□□□ -0.53
SRP54-208ENST00000555557 BIN2Q9UBW5 565 aaPredicted RBP11.71□□□□□ -0.53
SRP54-208ENST00000555557 CLIC4Q9Y696 253 aa11.71□□□□□ -0.53
SRP54-208ENST00000555557 USP17L15C9J2P7 530 aa11.7□□□□□ -0.54
SRP54-208ENST00000555557 USP17L13C9JLJ4 530 aa11.7□□□□□ -0.54
SRP54-208ENST00000555557 USP17L11C9JVI0 530 aa11.7□□□□□ -0.54
SRP54-208ENST00000555557 USP17L18D6R9N7 530 aa11.7□□□□□ -0.54
SRP54-208ENST00000555557 USP17L22D6RA61 530 aa11.7□□□□□ -0.54
SRP54-208ENST00000555557 USP17L17D6RBQ6 530 aa11.7□□□□□ -0.54
SRP54-208ENST00000555557 USP17L19D6RCP7 530 aa11.7□□□□□ -0.54
SRP54-208ENST00000555557 USP17L20D6RJB6 530 aa11.7□□□□□ -0.54
SRP54-208ENST00000555557 M0R2N6 131 aa11.7□□□□□ -0.54
SRP54-208ENST00000555557 GNA11P29992 359 aa11.7□□□□□ -0.54
SRP54-208ENST00000555557 TOB1P50616 345 aaPredicted RBP11.7□□□□□ -0.54
SRP54-208ENST00000555557 ADCY7P51828 1080 aa11.7□□□□□ -0.54
SRP54-208ENST00000555557 USP17L24Q0WX57 530 aa11.7□□□□□ -0.54
SRP54-208ENST00000555557 MOGSQ13724 837 aa11.7□□□□□ -0.54
SRP54-208ENST00000555557 COG2Q14746 738 aa11.7□□□□□ -0.54
SRP54-208ENST00000555557 UBE2SQ16763 222 aa11.7□□□□□ -0.54
SRP54-208ENST00000555557 PSTPIP2Q9H939 334 aa11.7□□□□□ -0.54
SRP54-208ENST00000555557 SLC38A10Q9HBR0 1119 aa11.7□□□□□ -0.54
SRP54-208ENST00000555557 RAVER2Q9HCJ3 691 aaKnown RBP11.7□□□□□ -0.54
SRP54-208ENST00000555557 TMEM260Q9NX78 707 aa11.7□□□□□ -0.54
SRP54-208ENST00000555557 ZNF536O15090 1300 aa11.7□□□□□ -0.54
SRP54-208ENST00000555557 UNCXA6NJT0 531 aa11.7□□□□□ -0.54
SRP54-208ENST00000555557 VWA5AO00534 786 aa11.7□□□□□ -0.54
SRP54-208ENST00000555557 PEX10O60683 326 aa11.7□□□□□ -0.54
SRP54-208ENST00000555557 DSG3P32926 999 aa11.7□□□□□ -0.54
SRP54-208ENST00000555557 JAKMIP3Q5VZ66 844 aa11.7□□□□□ -0.54
SRP54-208ENST00000555557 DAGLBQ8NCG7 672 aa11.7□□□□□ -0.54
SRP54-208ENST00000555557 PGBD1Q96JS3 809 aa11.7□□□□□ -0.54
SRP54-208ENST00000555557 PASKQ96RG2 1323 aa11.7□□□□□ -0.54
SRP54-208ENST00000555557 ESYT2A0FGR8 921 aa11.69□□□□□ -0.54
SRP54-208ENST00000555557 SPDYE16A6NNV3 312 aaPredicted RBP11.69□□□□□ -0.54
SRP54-208ENST00000555557 GOLGA6L22H0YM25 854 aa11.69□□□□□ -0.54
SRP54-208ENST00000555557 WNT7AO00755 349 aa11.69□□□□□ -0.54
SRP54-208ENST00000555557 OPLAHO14841 1288 aa11.69□□□□□ -0.54
SRP54-208ENST00000555557 SNAPC2Q13487 334 aa11.69□□□□□ -0.54
SRP54-208ENST00000555557 GALNT17Q6IS24 598 aa11.69□□□□□ -0.54
SRP54-208ENST00000555557 USP17L6PQ6QN14 398 aa11.69□□□□□ -0.54
SRP54-208ENST00000555557 PROCA1Q8NCQ7 364 aaPredicted RBP11.69□□□□□ -0.54
SRP54-208ENST00000555557 TBC1D5Q92609 795 aa11.69□□□□□ -0.54
SRP54-208ENST00000555557 ZNF396Q96N95 335 aaPredicted RBP11.69□□□□□ -0.54
SRP54-208ENST00000555557 RIC8AQ9NPQ8 531 aa11.69□□□□□ -0.54
SRP54-208ENST00000555557 LMBRD1Q9NUN5 540 aa11.69□□□□□ -0.54
SRP54-208ENST00000555557 CCPG1Q9ULG6 757 aa11.69□□□□□ -0.54
SRP54-208ENST00000555557 ZBED4O75132 1171 aa11.68□□□□□ -0.54
SRP54-208ENST00000555557 GADD45BO75293 160 aaPredicted RBP11.68□□□□□ -0.54
SRP54-208ENST00000555557 ICAM1P05362 532 aa11.68□□□□□ -0.54
SRP54-208ENST00000555557 SF3A1Q15459 793 aaKnown RBP11.68□□□□□ -0.54
SRP54-208ENST00000555557 PPP1R18Q6NYC8 613 aa11.68□□□□□ -0.54
SRP54-208ENST00000555557 POTEEQ6S8J3 1075 aa11.68□□□□□ -0.54
SRP54-208ENST00000555557 SAPCD2Q86UD0 394 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms