RNA–Protein interactions for RNA: ENST00000555518.5

LINC00643-203, long intergenic non-protein coding RNA 643, humanhuman

TSL 4

Gene LINC00643, Length 552 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-203ENST00000555518 SEZ6L2Q6UXD5 910 aa7.98□□□□□ -1.13
LINC00643-203ENST00000555518 ATG4DQ86TL0 474 aaPredicted RBP7.98□□□□□ -1.13
LINC00643-203ENST00000555518 GALNT12Q8IXK2 581 aa7.98□□□□□ -1.13
LINC00643-203ENST00000555518 TMEM57Q8N5G2 664 aa7.98□□□□□ -1.13
LINC00643-203ENST00000555518 PHAXQ9H814 394 aaKnown RBP7.98□□□□□ -1.13
LINC00643-203ENST00000555518 LIN7BQ9HAP6 207 aa7.98□□□□□ -1.13
LINC00643-203ENST00000555518 CHPF2Q9P2E5 772 aa7.98□□□□□ -1.13
LINC00643-203ENST00000555518 RGS17Q9UGC6 210 aaPredicted RBP7.98□□□□□ -1.13
LINC00643-203ENST00000555518 PXDNLA1KZ92 1463 aa7.98□□□□□ -1.13
LINC00643-203ENST00000555518 BRWD3Q6RI45 1802 aa7.98□□□□□ -1.13
LINC00643-203ENST00000555518 SBF2Q86WG5 1849 aa7.97□□□□□ -1.13
LINC00643-203ENST00000555518 METTL12A8MUP2 240 aa7.97□□□□□ -1.13
LINC00643-203ENST00000555518 B3GALT4O96024 378 aa7.97□□□□□ -1.13
LINC00643-203ENST00000555518 SNRPA1P09661 255 aaKnown RBP7.97□□□□□ -1.13
LINC00643-203ENST00000555518 EIF2S2P20042 333 aaKnown RBP7.97□□□□□ -1.13
LINC00643-203ENST00000555518 AP3B2Q13367 1082 aa7.97□□□□□ -1.13
LINC00643-203ENST00000555518 ZNF792Q3KQV3 632 aa7.97□□□□□ -1.13
LINC00643-203ENST00000555518 PTF1AQ7RTS3 328 aa7.97□□□□□ -1.13
LINC00643-203ENST00000555518 TTC5Q8N0Z6 440 aa7.97□□□□□ -1.13
LINC00643-203ENST00000555518 ACSBG1Q96GR2 724 aa7.97□□□□□ -1.13
LINC00643-203ENST00000555518 STK31Q9BXU1 1019 aa7.97□□□□□ -1.13
LINC00643-203ENST00000555518 API5Q9BZZ5 524 aaKnown RBP7.97□□□□□ -1.13
LINC00643-203ENST00000555518 C1GALT1Q9NS00 363 aa7.97□□□□□ -1.13
LINC00643-203ENST00000555518 ADCY9O60503 1353 aa7.97□□□□□ -1.13
LINC00643-203ENST00000555518 RREB1Q92766 1687 aa7.96□□□□□ -1.13
LINC00643-203ENST00000555518 KCNQ2O43526 872 aa7.96□□□□□ -1.14
LINC00643-203ENST00000555518 FKBP4Q02790 459 aaKnown RBP eCLIP7.96□□□□□ -1.14
LINC00643-203ENST00000555518 PKN1Q16512 942 aa7.96□□□□□ -1.14
LINC00643-203ENST00000555518 INTS3Q68E01 1043 aaKnown RBP7.96□□□□□ -1.14
LINC00643-203ENST00000555518 B4GALNT3Q6L9W6 998 aa7.96□□□□□ -1.14
LINC00643-203ENST00000555518 DDX21Q9NR30 783 aaKnown RBP eCLIP7.96□□□□□ -1.14
LINC00643-203ENST00000555518 DAGLAQ9Y4D2 1042 aa7.96□□□□□ -1.14
LINC00643-203ENST00000555518 KAT6BQ8WYB5 2073 aa7.96□□□□□ -1.14
LINC00643-203ENST00000555518 ZNF831Q5JPB2 1677 aa7.95□□□□□ -1.14
LINC00643-203ENST00000555518 BTAF1O14981 1849 aa7.95□□□□□ -1.14
LINC00643-203ENST00000555518 A0A1W2PP55 124 aa7.95□□□□□ -1.14
LINC00643-203ENST00000555518 DBX1A6NMT0 343 aa7.95□□□□□ -1.14
LINC00643-203ENST00000555518 F6X3S4 739 aa7.95□□□□□ -1.14
LINC00643-203ENST00000555518 FZD6O60353 706 aa7.95□□□□□ -1.14
LINC00643-203ENST00000555518 FARP2O94887 1054 aaPredicted RBP7.95□□□□□ -1.14
LINC00643-203ENST00000555518 PDIA4P13667 645 aaKnown RBP7.95□□□□□ -1.14
LINC00643-203ENST00000555518 PTPN12Q05209 780 aaKnown RBP7.95□□□□□ -1.14
LINC00643-203ENST00000555518 ZNF772Q68DY9 489 aaPredicted RBP7.95□□□□□ -1.14
LINC00643-203ENST00000555518 DNAJC10Q8IXB1 793 aa7.95□□□□□ -1.14
LINC00643-203ENST00000555518 FTSJ3Q8IY81 847 aaKnown RBP7.95□□□□□ -1.14
LINC00643-203ENST00000555518 TCF12Q99081 682 aa7.95□□□□□ -1.14
LINC00643-203ENST00000555518 ZBTB40Q9NUA8 1239 aa7.95□□□□□ -1.14
LINC00643-203ENST00000555518 DBF4Q9UBU7 674 aaPredicted RBP7.95□□□□□ -1.14
LINC00643-203ENST00000555518 KDM2BQ8NHM5 1336 aa7.95□□□□□ -1.14
LINC00643-203ENST00000555518 ATP10DQ9P241 1426 aa7.95□□□□□ -1.14
LINC00643-203ENST00000555518 AOC2O75106 756 aa7.94□□□□□ -1.14
LINC00643-203ENST00000555518 GRIA4P48058 902 aa7.94□□□□□ -1.14
LINC00643-203ENST00000555518 PIP4K2AP48426 406 aaPredicted RBP7.94□□□□□ -1.14
LINC00643-203ENST00000555518 RBM6P78332 1123 aaKnown RBP7.94□□□□□ -1.14
LINC00643-203ENST00000555518 KIAA0319Q5VV43 1072 aa7.94□□□□□ -1.14
LINC00643-203ENST00000555518 ITPRIPQ8IWB1 547 aa7.94□□□□□ -1.14
LINC00643-203ENST00000555518 NETO1Q8TDF5 533 aa7.94□□□□□ -1.14
LINC00643-203ENST00000555518 TMEM40Q8WWA1 233 aa7.94□□□□□ -1.14
LINC00643-203ENST00000555518 CHMP4AQ9BY43 222 aa7.94□□□□□ -1.14
LINC00643-203ENST00000555518 MKNK2Q9HBH9 465 aa7.94□□□□□ -1.14
LINC00643-203ENST00000555518 HYPKQ9NX55 129 aa7.94□□□□□ -1.14
LINC00643-203ENST00000555518 VAV3Q9UKW4 847 aa7.94□□□□□ -1.14
LINC00643-203ENST00000555518 DDX19BQ9UMR2 479 aa7.94□□□□□ -1.14
LINC00643-203ENST00000555518 COL5A3P25940 1745 aaPredicted RBP7.94□□□□□ -1.14
LINC00643-203ENST00000555518 NUP188Q5SRE5 1749 aa7.94□□□□□ -1.14
LINC00643-203ENST00000555518 PALLDQ8WX93 1383 aa7.94□□□□□ -1.14
LINC00643-203ENST00000555518 A1BGP04217 495 aa7.93□□□□□ -1.14
LINC00643-203ENST00000555518 CYP19A1P11511 503 aaPredicted RBP7.93□□□□□ -1.14
LINC00643-203ENST00000555518 FUT4P22083 530 aa7.93□□□□□ -1.14
LINC00643-203ENST00000555518 MTMR3Q13615 1198 aa7.93□□□□□ -1.14
LINC00643-203ENST00000555518 BEND3Q5T5X7 828 aa7.93□□□□□ -1.14
LINC00643-203ENST00000555518 XAGE3Q8WTP9 111 aa7.93□□□□□ -1.14
LINC00643-203ENST00000555518 SYTL4Q96C24 671 aaPredicted RBP7.93□□□□□ -1.14
LINC00643-203ENST00000555518 TRIM56Q9BRZ2 755 aaKnown RBP7.93□□□□□ -1.14
LINC00643-203ENST00000555518 TRAIPQ9BWF2 469 aa7.93□□□□□ -1.14
LINC00643-203ENST00000555518 IBTKQ9P2D0 1353 aaPredicted RBP7.93□□□□□ -1.14
LINC00643-203ENST00000555518 MYH14Q7Z406 1995 aaKnown RBP7.93□□□□□ -1.14
LINC00643-203ENST00000555518 LY75O60449 1722 aa7.92□□□□□ -1.14
LINC00643-203ENST00000555518 ARFGEF2Q9Y6D5 1785 aa7.92□□□□□ -1.14
LINC00643-203ENST00000555518 PI4KAP2A4QPH2 592 aa7.92□□□□□ -1.14
LINC00643-203ENST00000555518 IGHDP01880 384 aa7.92□□□□□ -1.14
LINC00643-203ENST00000555518 CTSBP07858 339 aa7.92□□□□□ -1.14
LINC00643-203ENST00000555518 SLFN14P0C7P3 912 aa7.92□□□□□ -1.14
LINC00643-203ENST00000555518 ITPKAP23677 461 aa7.92□□□□□ -1.14
LINC00643-203ENST00000555518 PRKCQQ04759 706 aa7.92□□□□□ -1.14
LINC00643-203ENST00000555518 ITPK1Q13572 414 aa7.92□□□□□ -1.14
LINC00643-203ENST00000555518 SPRED3Q2MJR0 410 aa7.92□□□□□ -1.14
LINC00643-203ENST00000555518 KSR2Q6VAB6 950 aa7.92□□□□□ -1.14
LINC00643-203ENST00000555518 KRT27Q7Z3Y8 459 aa7.92□□□□□ -1.14
LINC00643-203ENST00000555518 PI4KAP1Q8N8J0 262 aa7.92□□□□□ -1.14
LINC00643-203ENST00000555518 DNAAF4Q8WXU2 420 aa7.92□□□□□ -1.14
LINC00643-203ENST00000555518 CCDC136Q96JN2 1154 aa7.92□□□□□ -1.14
LINC00643-203ENST00000555518 ATXN3LQ9H3M9 355 aa7.92□□□□□ -1.14
LINC00643-203ENST00000555518 ZNF576Q9H609 170 aa7.92□□□□□ -1.14
LINC00643-203ENST00000555518 PIDD1Q9HB75 910 aa7.92□□□□□ -1.14
LINC00643-203ENST00000555518 POLR3DP05423 398 aaPredicted RBP7.91□□□□□ -1.14
LINC00643-203ENST00000555518 MYL6BP14649 208 aa7.91□□□□□ -1.14
LINC00643-203ENST00000555518 CCT4P50991 539 aaKnown RBP7.91□□□□□ -1.14
LINC00643-203ENST00000555518 RPS26P11Q5JNZ5 115 aaPredicted RBP7.91□□□□□ -1.14
LINC00643-203ENST00000555518 COPS6Q7L5N1 327 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms