RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 POLR3KQ9Y2Y1 108 aaPredicted RBP8.33□□□□□ -1.08
VRK1-205ENST00000555402 WTIPA6NIX2 430 aaPredicted RBP8.32□□□□□ -1.08
VRK1-205ENST00000555402 RGS13O14921 159 aa8.32□□□□□ -1.08
VRK1-205ENST00000555402 GRIN3BO60391 1043 aa8.32□□□□□ -1.08
VRK1-205ENST00000555402 RACK1P63244 317 aaKnown RBP8.32□□□□□ -1.08
VRK1-205ENST00000555402 CAP1Q01518 475 aa8.32□□□□□ -1.08
VRK1-205ENST00000555402 LMNB2Q03252 620 aa8.32□□□□□ -1.08
VRK1-205ENST00000555402 ZFYVE27Q5T4F4 411 aa8.32□□□□□ -1.08
VRK1-205ENST00000555402 HHIPL2Q6UWX4 724 aa8.32□□□□□ -1.08
VRK1-205ENST00000555402 SLURP1P55000 103 aa8.31□□□□□ -1.08
VRK1-205ENST00000555402 RNF4P78317 190 aa8.31□□□□□ -1.08
VRK1-205ENST00000555402 CBX2Q14781 532 aaPredicted RBP8.31□□□□□ -1.08
VRK1-205ENST00000555402 RELL1Q8IUW5 271 aa8.31□□□□□ -1.08
VRK1-205ENST00000555402 FCRL2Q96LA5 508 aaPredicted RBP8.31□□□□□ -1.08
VRK1-205ENST00000555402 GPR20Q99678 358 aa8.31□□□□□ -1.08
VRK1-205ENST00000555402 TINF2Q9BSI4 451 aa8.31□□□□□ -1.08
VRK1-205ENST00000555402 COPRSQ9NQ92 184 aa8.31□□□□□ -1.08
VRK1-205ENST00000555402 TAF6LQ9Y6J9 622 aa8.31□□□□□ -1.08
VRK1-205ENST00000555402 NUDT19A8MXV4 375 aa8.3□□□□□ -1.08
VRK1-205ENST00000555402 F6X3S4 739 aa8.3□□□□□ -1.08
VRK1-205ENST00000555402 PF4P02776 101 aa8.3□□□□□ -1.08
VRK1-205ENST00000555402 PRKCAP17252 672 aa8.3□□□□□ -1.08
VRK1-205ENST00000555402 NBPF9Q3BBW0 867 aa8.3□□□□□ -1.08
VRK1-205ENST00000555402 TANGO6Q9C0B7 1094 aa8.3□□□□□ -1.08
VRK1-205ENST00000555402 KBTBD4Q9NVX7 518 aa8.3□□□□□ -1.08
VRK1-205ENST00000555402 CNOT11Q9UKZ1 510 aaKnown RBP8.3□□□□□ -1.08
VRK1-205ENST00000555402 GPR55Q9Y2T6 319 aaPredicted RBP8.3□□□□□ -1.08
VRK1-205ENST00000555402 UBOX5O94941 541 aa8.29□□□□□ -1.08
VRK1-205ENST00000555402 CYP4F8P98187 520 aa8.29□□□□□ -1.08
VRK1-205ENST00000555402 SNW1Q13573 536 aaKnown RBP8.29□□□□□ -1.08
VRK1-205ENST00000555402 PWP1Q13610 501 aa8.29□□□□□ -1.08
VRK1-205ENST00000555402 ERMP1Q7Z2K6 904 aa8.29□□□□□ -1.08
VRK1-205ENST00000555402 IRS2Q9Y4H2 1338 aa8.29□□□□□ -1.08
VRK1-205ENST00000555402 MINDY4BA8MYZ0 360 aa8.28□□□□□ -1.08
VRK1-205ENST00000555402 PRAMEF1O95521 474 aa8.28□□□□□ -1.08
VRK1-205ENST00000555402 DNAJA1P31689 397 aaKnown RBP8.28□□□□□ -1.08
VRK1-205ENST00000555402 GBP2P32456 591 aaPredicted RBP8.28□□□□□ -1.08
VRK1-205ENST00000555402 NBPF12Q5TAG4 269 aaPredicted RBP8.28□□□□□ -1.08
VRK1-205ENST00000555402 RPTNQ6XPR3 784 aa8.28□□□□□ -1.08
VRK1-205ENST00000555402 SLCO6A1Q86UG4 719 aa8.28□□□□□ -1.08
VRK1-205ENST00000555402 VPS37DQ86XT2 251 aa8.28□□□□□ -1.08
VRK1-205ENST00000555402 NLGN1Q8N2Q7 840 aa8.28□□□□□ -1.08
VRK1-205ENST00000555402 RSRP1Q9BUV0 290 aa8.28□□□□□ -1.08
VRK1-205ENST00000555402 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.28□□□□□ -1.08
VRK1-205ENST00000555402 TNFRSF12AQ9NP84 129 aa8.28□□□□□ -1.08
VRK1-205ENST00000555402 ACSL6Q9UKU0 697 aa8.28□□□□□ -1.08
VRK1-205ENST00000555402 IGFBP6P24592 240 aaPredicted RBP8.27□□□□□ -1.09
VRK1-205ENST00000555402 SLC43A3Q8NBI5 491 aa8.27□□□□□ -1.09
VRK1-205ENST00000555402 PALD1Q9ULE6 856 aa8.27□□□□□ -1.09
VRK1-205ENST00000555402 A0A1W2PQ45 241 aaPredicted RBP8.26□□□□□ -1.09
VRK1-205ENST00000555402 A0A1W2PQY0 241 aa8.26□□□□□ -1.09
VRK1-205ENST00000555402 K7ESM1 405 aa8.26□□□□□ -1.09
VRK1-205ENST00000555402 SIGLEC6O43699 453 aa8.26□□□□□ -1.09
VRK1-205ENST00000555402 LIMS1P48059 325 aa8.26□□□□□ -1.09
VRK1-205ENST00000555402 UBXN11Q5T124 520 aa8.26□□□□□ -1.09
VRK1-205ENST00000555402 NUP43Q8NFH3 380 aa8.26□□□□□ -1.09
VRK1-205ENST00000555402 UBXN4Q92575 508 aa8.26□□□□□ -1.09
VRK1-205ENST00000555402 SPON2Q9BUD6 331 aa8.26□□□□□ -1.09
VRK1-205ENST00000555402 SHROOM4Q9ULL8 1493 aa8.26□□□□□ -1.09
VRK1-205ENST00000555402 LOC105371045A0A1W2PR82 267 aa8.25□□□□□ -1.09
VRK1-205ENST00000555402 PFKLP17858 780 aa8.25□□□□□ -1.09
VRK1-205ENST00000555402 ATP2B1P20020 1258 aa8.25□□□□□ -1.09
VRK1-205ENST00000555402 CEBPAP49715 358 aaPredicted RBP8.25□□□□□ -1.09
VRK1-205ENST00000555402 ARID5AQ03989 594 aa8.25□□□□□ -1.09
VRK1-205ENST00000555402 PAK2Q13177 524 aa8.25□□□□□ -1.09
VRK1-205ENST00000555402 ARSHQ5FYA8 562 aa8.25□□□□□ -1.09
VRK1-205ENST00000555402 RHOVQ96L33 236 aa8.25□□□□□ -1.09
VRK1-205ENST00000555402 TMEM74Q96NL1 305 aa8.25□□□□□ -1.09
VRK1-205ENST00000555402 KRTAP9-8Q9BYQ0 159 aa8.25□□□□□ -1.09
VRK1-205ENST00000555402 PRDM14Q9GZV8 571 aa8.25□□□□□ -1.09
VRK1-205ENST00000555402 ERVK13-1Q9NX77 482 aa8.25□□□□□ -1.09
VRK1-205ENST00000555402 MINPP1Q9UNW1 487 aa8.25□□□□□ -1.09
VRK1-205ENST00000555402 RAG1P15918 1043 aa8.24□□□□□ -1.09
VRK1-205ENST00000555402 PLEKHN1Q494U1 663 aaPredicted RBP8.24□□□□□ -1.09
VRK1-205ENST00000555402 ZC3H14Q6PJT7 736 aaKnown RBP8.24□□□□□ -1.09
VRK1-205ENST00000555402 FERMT3Q86UX7 667 aa8.24□□□□□ -1.09
VRK1-205ENST00000555402 KIAA0825Q8IV33 1275 aa8.24□□□□□ -1.09
VRK1-205ENST00000555402 ENDOUP21128 410 aaKnown RBP8.23□□□□□ -1.09
VRK1-205ENST00000555402 EIF4A3P38919 411 aaKnown RBP8.23□□□□□ -1.09
VRK1-205ENST00000555402 MAPKAPK2P49137 400 aa8.23□□□□□ -1.09
VRK1-205ENST00000555402 ZNF200P98182 395 aaPredicted RBP8.23□□□□□ -1.09
VRK1-205ENST00000555402 MLECQ14165 292 aa8.23□□□□□ -1.09
VRK1-205ENST00000555402 MPP2Q14168 576 aa8.23□□□□□ -1.09
VRK1-205ENST00000555402 ZNF827Q17R98 1081 aa8.23□□□□□ -1.09
VRK1-205ENST00000555402 VWA3BQ502W6 1294 aa8.23□□□□□ -1.09
VRK1-205ENST00000555402 REC114Q7Z4M0 266 aa8.23□□□□□ -1.09
VRK1-205ENST00000555402 ADGRG2Q8IZP9 1017 aa8.23□□□□□ -1.09
VRK1-205ENST00000555402 GPRASP2Q96D09 838 aa8.23□□□□□ -1.09
VRK1-205ENST00000555402 CDADC1Q9BWV3 514 aa8.23□□□□□ -1.09
VRK1-205ENST00000555402 CHST7Q9NS84 486 aa8.23□□□□□ -1.09
VRK1-205ENST00000555402 SUSD2Q9UGT4 822 aa8.23□□□□□ -1.09
VRK1-205ENST00000555402 AKAP8O43823 692 aaKnown RBP8.22□□□□□ -1.09
VRK1-205ENST00000555402 GTF2F1P35269 517 aaKnown RBP eCLIP8.22□□□□□ -1.09
VRK1-205ENST00000555402 MAGEA10P43363 369 aaPredicted RBP8.22□□□□□ -1.09
VRK1-205ENST00000555402 FAM160A1Q05DH4 1040 aa8.22□□□□□ -1.09
VRK1-205ENST00000555402 NR1I3Q14994 352 aa8.22□□□□□ -1.09
VRK1-205ENST00000555402 NT5DC1Q5TFE4 455 aa8.22□□□□□ -1.09
VRK1-205ENST00000555402 USP40Q9NVE5 1235 aa8.22□□□□□ -1.09
VRK1-205ENST00000555402 IMPACTQ9P2X3 320 aa8.22□□□□□ -1.09
VRK1-205ENST00000555402 GJA8P48165 433 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms