RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 SP3Q02447 781 aa16.56■□□□□ 0.24
CHD8-208ENST00000555301 TRAF1Q13077 416 aa16.56■□□□□ 0.24
CHD8-208ENST00000555301 PLS1Q14651 629 aa16.56■□□□□ 0.24
CHD8-208ENST00000555301 CCDC174Q6PII3 467 aa16.56■□□□□ 0.24
CHD8-208ENST00000555301 CPXCR1Q8N123 301 aa16.56■□□□□ 0.24
CHD8-208ENST00000555301 CMTR1Q8N1G2 835 aaKnown RBP16.56■□□□□ 0.24
CHD8-208ENST00000555301 CCDC82Q8N4S0 544 aa16.56■□□□□ 0.24
CHD8-208ENST00000555301 GTF3C6Q969F1 213 aa16.56■□□□□ 0.24
CHD8-208ENST00000555301 RRP36Q96EU6 259 aaKnown RBP16.56■□□□□ 0.24
CHD8-208ENST00000555301 NCOA5Q9HCD5 579 aaKnown RBP16.56■□□□□ 0.24
CHD8-208ENST00000555301 RAVER2Q9HCJ3 691 aaKnown RBP16.56■□□□□ 0.24
CHD8-208ENST00000555301 RBM27Q9P2N5 1060 aaKnown RBP16.56■□□□□ 0.24
CHD8-208ENST00000555301 SEC63Q9UGP8 760 aaKnown RBP16.56■□□□□ 0.24
CHD8-208ENST00000555301 CEP350Q5VT06 3117 aa16.56■□□□□ 0.24
CHD8-208ENST00000555301 ZNF536O15090 1300 aa16.55■□□□□ 0.24
CHD8-208ENST00000555301 PNMA6FA0A0J9YX94 578 aa16.55■□□□□ 0.24
CHD8-208ENST00000555301 LARGE1O95461 756 aa16.55■□□□□ 0.24
CHD8-208ENST00000555301 HSPA1AP0DMV8 641 aaKnown RBP16.55■□□□□ 0.24
CHD8-208ENST00000555301 HSPA1BP0DMV9 641 aaKnown RBP16.55■□□□□ 0.24
CHD8-208ENST00000555301 FUT2Q10981 343 aa16.55■□□□□ 0.24
CHD8-208ENST00000555301 NTRK3Q16288 839 aa16.55■□□□□ 0.24
CHD8-208ENST00000555301 SLC35G1Q2M3R5 365 aa16.55■□□□□ 0.24
CHD8-208ENST00000555301 QRICH1Q2TAL8 776 aa16.55■□□□□ 0.24
CHD8-208ENST00000555301 Q3C1V9 767 aa16.55■□□□□ 0.24
CHD8-208ENST00000555301 SNRNP48Q6IEG0 339 aaKnown RBP16.55■□□□□ 0.24
CHD8-208ENST00000555301 HOMER1Q86YM7 354 aa16.55■□□□□ 0.24
CHD8-208ENST00000555301 RIOX2Q8IUF8 465 aa16.55■□□□□ 0.24
CHD8-208ENST00000555301 CCAR1Q8IX12 1150 aaKnown RBP16.55■□□□□ 0.24
CHD8-208ENST00000555301 SHCBP1Q8NEM2 672 aa16.55■□□□□ 0.24
CHD8-208ENST00000555301 PIGSQ96S52 555 aa16.55■□□□□ 0.24
CHD8-208ENST00000555301 CNTNAP5Q8WYK1 1306 aa16.54■□□□□ 0.24
CHD8-208ENST00000555301 CD2BP2O95400 341 aaKnown RBP16.54■□□□□ 0.24
CHD8-208ENST00000555301 MAPK4P31152 587 aa16.54■□□□□ 0.24
CHD8-208ENST00000555301 SNAP25P60880 206 aa16.54■□□□□ 0.24
CHD8-208ENST00000555301 AKAP17AQ02040 695 aaKnown RBP16.54■□□□□ 0.24
CHD8-208ENST00000555301 KIF22Q14807 665 aa16.54■□□□□ 0.24
CHD8-208ENST00000555301 TKFCQ3LXA3 575 aa16.54■□□□□ 0.24
CHD8-208ENST00000555301 FBXO11Q86XK2 927 aa16.54■□□□□ 0.24
CHD8-208ENST00000555301 TRIM22Q8IYM9 498 aa16.54■□□□□ 0.24
CHD8-208ENST00000555301 NECAB1Q8N987 351 aa16.54■□□□□ 0.24
CHD8-208ENST00000555301 SNX21Q969T3 373 aa16.54■□□□□ 0.24
CHD8-208ENST00000555301 AMNQ9BXJ7 453 aa16.54■□□□□ 0.24
CHD8-208ENST00000555301 MOV10L1Q9BXT6 1211 aaKnown RBP16.54■□□□□ 0.24
CHD8-208ENST00000555301 RNF26Q9BY78 433 aaPredicted RBP16.54■□□□□ 0.24
CHD8-208ENST00000555301 MROH8Q9H579 483 aa16.54■□□□□ 0.24
CHD8-208ENST00000555301 CCPG1Q9ULG6 757 aa16.54■□□□□ 0.24
CHD8-208ENST00000555301 PRPF3O43395 683 aaKnown RBP16.53■□□□□ 0.24
CHD8-208ENST00000555301 PEX10O60683 326 aa16.53■□□□□ 0.24
CHD8-208ENST00000555301 FKTNO75072 461 aa16.53■□□□□ 0.24
CHD8-208ENST00000555301 LACTBP83111 547 aaPredicted RBP16.53■□□□□ 0.24
CHD8-208ENST00000555301 TMX3Q96JJ7 454 aa16.53■□□□□ 0.24
CHD8-208ENST00000555301 AGBL1Q96MI9 1066 aa16.53■□□□□ 0.24
CHD8-208ENST00000555301 FBXO40Q9UH90 709 aa16.53■□□□□ 0.24
CHD8-208ENST00000555301 TSKSQ9UJT2 592 aa16.53■□□□□ 0.24
CHD8-208ENST00000555301 V9GY48 417 aaPredicted RBP16.53■□□□□ 0.24
CHD8-208ENST00000555301 ERCC3P19447 782 aa16.52■□□□□ 0.24
CHD8-208ENST00000555301 SLC4A3P48751 1232 aa16.52■□□□□ 0.24
CHD8-208ENST00000555301 CTCFP49711 727 aaPredicted RBP16.52■□□□□ 0.24
CHD8-208ENST00000555301 SSRP1Q08945 709 aaKnown RBP16.52■□□□□ 0.24
CHD8-208ENST00000555301 ARHGEF6Q15052 776 aa16.52■□□□□ 0.24
CHD8-208ENST00000555301 NCAPG2Q86XI2 1143 aa16.52■□□□□ 0.24
CHD8-208ENST00000555301 CCDC83Q8IWF9 413 aa16.52■□□□□ 0.24
CHD8-208ENST00000555301 CHST13Q8NET6 341 aa16.52■□□□□ 0.24
CHD8-208ENST00000555301 ZNF296Q8WUU4 475 aaPredicted RBP16.52■□□□□ 0.24
CHD8-208ENST00000555301 PIBF1Q8WXW3 757 aa16.52■□□□□ 0.24
CHD8-208ENST00000555301 PHKBQ93100 1093 aa16.52■□□□□ 0.24
CHD8-208ENST00000555301 ERO1AQ96HE7 468 aa16.52■□□□□ 0.24
CHD8-208ENST00000555301 SLC26A6Q9BXS9 759 aa16.52■□□□□ 0.24
CHD8-208ENST00000555301 CWC22Q9HCG8 908 aaKnown RBP16.52■□□□□ 0.24
CHD8-208ENST00000555301 ABCB11O95342 1321 aa16.51■□□□□ 0.23
CHD8-208ENST00000555301 A0A0G2JMZ2 1700 aa16.51■□□□□ 0.23
CHD8-208ENST00000555301 hCG_1984214I3L0E3 225 aa16.51■□□□□ 0.23
CHD8-208ENST00000555301 FOXN1O15353 648 aa16.51■□□□□ 0.23
CHD8-208ENST00000555301 FMNL1O95466 1100 aaPredicted RBP16.51■□□□□ 0.23
CHD8-208ENST00000555301 HSPA8P11142 646 aaKnown RBP16.51■□□□□ 0.23
CHD8-208ENST00000555301 ALAS1P13196 640 aa16.51■□□□□ 0.23
CHD8-208ENST00000555301 FCGRTP55899 365 aa16.51■□□□□ 0.23
CHD8-208ENST00000555301 USH1GQ495M9 461 aa16.51■□□□□ 0.23
CHD8-208ENST00000555301 HSCBQ8IWL3 235 aa16.51■□□□□ 0.23
CHD8-208ENST00000555301 ZNF713Q8N859 430 aaPredicted RBP16.51■□□□□ 0.23
CHD8-208ENST00000555301 TRERF1Q96PN7 1200 aa16.51■□□□□ 0.23
CHD8-208ENST00000555301 LLPHQ9BRT6 129 aaKnown RBP16.51■□□□□ 0.23
CHD8-208ENST00000555301 PORCNQ9H237 461 aa16.51■□□□□ 0.23
CHD8-208ENST00000555301 EFCC1Q9HA90 598 aa16.51■□□□□ 0.23
CHD8-208ENST00000555301 MRPL11Q9Y3B7 192 aaKnown RBP16.51■□□□□ 0.23
CHD8-208ENST00000555301 RIPK3Q9Y572 518 aa16.51■□□□□ 0.23
CHD8-208ENST00000555301 PCDHA1Q9Y5I3 950 aa16.51■□□□□ 0.23
CHD8-208ENST00000555301 RLFQ13129 1914 aa16.51■□□□□ 0.23
CHD8-208ENST00000555301 STK36Q9NRP7 1315 aa16.5■□□□□ 0.23
CHD8-208ENST00000555301 STRNO43815 780 aa16.5■□□□□ 0.23
CHD8-208ENST00000555301 DEXIO95424 95 aa16.5■□□□□ 0.23
CHD8-208ENST00000555301 PSMC4P43686 418 aa16.5■□□□□ 0.23
CHD8-208ENST00000555301 PFKFB3Q16875 520 aaPredicted RBP16.5■□□□□ 0.23
CHD8-208ENST00000555301 WDR78Q5VTH9 848 aa16.5■□□□□ 0.23
CHD8-208ENST00000555301 PLEKHH3Q7Z736 793 aa16.5■□□□□ 0.23
CHD8-208ENST00000555301 ACAD9Q9H845 621 aa16.5■□□□□ 0.23
CHD8-208ENST00000555301 RNF146Q9NTX7 359 aa16.5■□□□□ 0.23
CHD8-208ENST00000555301 IVNS1ABPQ9Y6Y0 642 aa16.5■□□□□ 0.23
CHD8-208ENST00000555301 hCG_1642624A0A1W2PR95 340 aa16.49■□□□□ 0.23
CHD8-208ENST00000555301 K7ELQ4 463 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms