RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 PUS7Q96PZ0 661 aaKnown RBP7.8□□□□□ -1.16
CKS1BP1-201ENST00000555221 RNF112Q9ULX5 631 aa7.8□□□□□ -1.16
CKS1BP1-201ENST00000555221 MINPP1Q9UNW1 487 aa7.8□□□□□ -1.16
CKS1BP1-201ENST00000555221 GPR55Q9Y2T6 319 aaPredicted RBP7.8□□□□□ -1.16
CKS1BP1-201ENST00000555221 U3KQE9 123 aa7.8□□□□□ -1.16
CKS1BP1-201ENST00000555221 H3BS24 57 aa7.79□□□□□ -1.16
CKS1BP1-201ENST00000555221 PLD2O14939 933 aa7.79□□□□□ -1.16
CKS1BP1-201ENST00000555221 VAMP4O75379 141 aa7.79□□□□□ -1.16
CKS1BP1-201ENST00000555221 IGHA1P01876 353 aa7.79□□□□□ -1.16
CKS1BP1-201ENST00000555221 SCG5P05408 212 aa7.79□□□□□ -1.16
CKS1BP1-201ENST00000555221 TPP2P29144 1249 aaPredicted RBP7.79□□□□□ -1.16
CKS1BP1-201ENST00000555221 KCNJ6P48051 423 aa7.79□□□□□ -1.16
CKS1BP1-201ENST00000555221 GYS2P54840 703 aa7.79□□□□□ -1.16
CKS1BP1-201ENST00000555221 GFRA1P56159 465 aa7.79□□□□□ -1.16
CKS1BP1-201ENST00000555221 PCBP3P57721 371 aaKnown RBP7.79□□□□□ -1.16
CKS1BP1-201ENST00000555221 MRPL4Q9BYD3 311 aaKnown RBP7.79□□□□□ -1.16
CKS1BP1-201ENST00000555221 NCOA5Q9HCD5 579 aaKnown RBP7.79□□□□□ -1.16
CKS1BP1-201ENST00000555221 ZSWIM5Q9P217 1185 aa7.79□□□□□ -1.16
CKS1BP1-201ENST00000555221 PLAGL2Q9UPG8 496 aa7.79□□□□□ -1.16
CKS1BP1-201ENST00000555221 CD2APQ9Y5K6 639 aa7.79□□□□□ -1.16
CKS1BP1-201ENST00000555221 SSU72P8A0A1W2PR75 194 aa7.78□□□□□ -1.16
CKS1BP1-201ENST00000555221 RBAK-RBAKDNI3L0D1 243 aa7.78□□□□□ -1.16
CKS1BP1-201ENST00000555221 DLX3O60479 287 aa7.78□□□□□ -1.16
CKS1BP1-201ENST00000555221 RFPL3O75679 317 aa7.78□□□□□ -1.16
CKS1BP1-201ENST00000555221 CD3EP07766 207 aa7.78□□□□□ -1.16
CKS1BP1-201ENST00000555221 ENDOUP21128 410 aaKnown RBP7.78□□□□□ -1.16
CKS1BP1-201ENST00000555221 DPY19L1Q2PZI1 675 aa7.78□□□□□ -1.16
CKS1BP1-201ENST00000555221 GAB4Q2WGN9 574 aa7.78□□□□□ -1.16
CKS1BP1-201ENST00000555221 FNDC3BQ53EP0 1204 aaKnown RBP7.78□□□□□ -1.16
CKS1BP1-201ENST00000555221 TMPRSS7Q7RTY8 843 aa7.78□□□□□ -1.16
CKS1BP1-201ENST00000555221 PLD6Q8N2A8 252 aaKnown RBP7.78□□□□□ -1.16
CKS1BP1-201ENST00000555221 LINC00116Q8NCU8 138 aa7.78□□□□□ -1.16
CKS1BP1-201ENST00000555221 UBE2FQ969M7 185 aa7.78□□□□□ -1.16
CKS1BP1-201ENST00000555221 PRR19A6NJB7 356 aa7.77□□□□□ -1.17
CKS1BP1-201ENST00000555221 AURKAO14965 403 aa7.77□□□□□ -1.17
CKS1BP1-201ENST00000555221 VAV1P15498 845 aa7.77□□□□□ -1.17
CKS1BP1-201ENST00000555221 RNF111Q6ZNA4 994 aa7.77□□□□□ -1.17
CKS1BP1-201ENST00000555221 TMEM145Q8NBT3 493 aa7.77□□□□□ -1.17
CKS1BP1-201ENST00000555221 SPC25Q9HBM1 224 aa7.77□□□□□ -1.17
CKS1BP1-201ENST00000555221 SEMA3GQ9NS98 782 aa7.77□□□□□ -1.17
CKS1BP1-201ENST00000555221 ZC3H7BQ9UGR2 993 aaKnown RBP7.77□□□□□ -1.17
CKS1BP1-201ENST00000555221 DUSP13Q9UII6 198 aa7.77□□□□□ -1.17
CKS1BP1-201ENST00000555221 BACE2Q9Y5Z0 518 aa7.77□□□□□ -1.17
CKS1BP1-201ENST00000555221 C2orf71A6NGG8 1288 aa7.76□□□□□ -1.17
CKS1BP1-201ENST00000555221 STXBP3O00186 592 aa7.76□□□□□ -1.17
CKS1BP1-201ENST00000555221 DNAJC6O75061 913 aa7.76□□□□□ -1.17
CKS1BP1-201ENST00000555221 ZNF205O95201 554 aa7.76□□□□□ -1.17
CKS1BP1-201ENST00000555221 SYPP08247 313 aa7.76□□□□□ -1.17
CKS1BP1-201ENST00000555221 HMGB1P09429 215 aaKnown RBP7.76□□□□□ -1.17
CKS1BP1-201ENST00000555221 LTKP29376 864 aa7.76□□□□□ -1.17
CKS1BP1-201ENST00000555221 ECI1P42126 302 aa7.76□□□□□ -1.17
CKS1BP1-201ENST00000555221 GABREP78334 506 aa7.76□□□□□ -1.17
CKS1BP1-201ENST00000555221 SCRN1Q12765 414 aa7.76□□□□□ -1.17
CKS1BP1-201ENST00000555221 DALRD3Q5D0E6 543 aaKnown RBP7.76□□□□□ -1.17
CKS1BP1-201ENST00000555221 USHBP1Q8N6Y0 703 aa7.76□□□□□ -1.17
CKS1BP1-201ENST00000555221 ASB11Q8WXH4 323 aa7.76□□□□□ -1.17
CKS1BP1-201ENST00000555221 NINJ1Q92982 152 aa7.76□□□□□ -1.17
CKS1BP1-201ENST00000555221 HRASLS5Q96KN8 279 aa7.76□□□□□ -1.17
CKS1BP1-201ENST00000555221 SLC12A9Q9BXP2 914 aa7.76□□□□□ -1.17
CKS1BP1-201ENST00000555221 TCFL5Q9UL49 500 aa7.76□□□□□ -1.17
CKS1BP1-201ENST00000555221 PITPNM2Q9BZ72 1349 aa7.76□□□□□ -1.17
CKS1BP1-201ENST00000555221 EFCAB14O75071 495 aa7.75□□□□□ -1.17
CKS1BP1-201ENST00000555221 GRIK1P39086 918 aa7.75□□□□□ -1.17
CKS1BP1-201ENST00000555221 SEPHS1P49903 392 aa7.75□□□□□ -1.17
CKS1BP1-201ENST00000555221 PABPC4Q13310 644 aaKnown RBP eCLIP7.75□□□□□ -1.17
CKS1BP1-201ENST00000555221 SF1Q15637 639 aaKnown RBP7.75□□□□□ -1.17
CKS1BP1-201ENST00000555221 SLC35F1Q5T1Q4 408 aa7.75□□□□□ -1.17
CKS1BP1-201ENST00000555221 EEF1DP3Q658K8 133 aa7.75□□□□□ -1.17
CKS1BP1-201ENST00000555221 RCSD1Q6JBY9 416 aa7.75□□□□□ -1.17
CKS1BP1-201ENST00000555221 FILIP1Q7Z7B0 1213 aa7.75□□□□□ -1.17
CKS1BP1-201ENST00000555221 KSR1Q8IVT5 923 aa7.75□□□□□ -1.17
CKS1BP1-201ENST00000555221 ZCRB1Q8TBF4 217 aaKnown RBP7.75□□□□□ -1.17
CKS1BP1-201ENST00000555221 COPS5Q92905 334 aa7.75□□□□□ -1.17
CKS1BP1-201ENST00000555221 MFSD3Q96ES6 412 aa7.75□□□□□ -1.17
CKS1BP1-201ENST00000555221 MISP3Q96FF7 219 aa7.75□□□□□ -1.17
CKS1BP1-201ENST00000555221 FCRL3Q96P31 734 aaPredicted RBP7.75□□□□□ -1.17
CKS1BP1-201ENST00000555221 MCMBPQ9BTE3 642 aa7.75□□□□□ -1.17
CKS1BP1-201ENST00000555221 SFMBT1Q9UHJ3 866 aa7.75□□□□□ -1.17
CKS1BP1-201ENST00000555221 RAPGEF3O95398 923 aa7.74□□□□□ -1.17
CKS1BP1-201ENST00000555221 CBX2Q14781 532 aaPredicted RBP7.74□□□□□ -1.17
CKS1BP1-201ENST00000555221 TRIM61Q5EBN2 209 aa7.74□□□□□ -1.17
CKS1BP1-201ENST00000555221 ACBD5Q5T8D3 534 aaPredicted RBP7.74□□□□□ -1.17
CKS1BP1-201ENST00000555221 MAMDC2Q7Z304 686 aaPredicted RBP7.74□□□□□ -1.17
CKS1BP1-201ENST00000555221 NIM1KQ8IY84 436 aa7.74□□□□□ -1.17
CKS1BP1-201ENST00000555221 PTPRN2Q92932 1015 aa7.74□□□□□ -1.17
CKS1BP1-201ENST00000555221 C1orf159Q96HA4 380 aa7.74□□□□□ -1.17
CKS1BP1-201ENST00000555221 FOXP3Q9BZS1 431 aa7.74□□□□□ -1.17
CKS1BP1-201ENST00000555221 VAV3Q9UKW4 847 aa7.74□□□□□ -1.17
CKS1BP1-201ENST00000555221 TRBV23OR9-2A0A075B6M9 112 aa7.73□□□□□ -1.17
CKS1BP1-201ENST00000555221 WASH4PA8MWX3 477 aa7.73□□□□□ -1.17
CKS1BP1-201ENST00000555221 KCNQ2O43526 872 aa7.73□□□□□ -1.17
CKS1BP1-201ENST00000555221 APPP05067 770 aa7.73□□□□□ -1.17
CKS1BP1-201ENST00000555221 GSTM1P09488 218 aa7.73□□□□□ -1.17
CKS1BP1-201ENST00000555221 HSP90B1P14625 803 aaKnown RBP7.73□□□□□ -1.17
CKS1BP1-201ENST00000555221 IFNGR1P15260 489 aa7.73□□□□□ -1.17
CKS1BP1-201ENST00000555221 IBSPP21815 317 aaPredicted RBP7.73□□□□□ -1.17
CKS1BP1-201ENST00000555221 PRKCQQ04759 706 aa7.73□□□□□ -1.17
CKS1BP1-201ENST00000555221 CREG2Q8IUH2 290 aa7.73□□□□□ -1.17
CKS1BP1-201ENST00000555221 DCAF4Q8WV16 495 aa7.73□□□□□ -1.17
CKS1BP1-201ENST00000555221 ATP13A1Q9HD20 1204 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms