RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 SAMD1Q6SPF0 538 aaPredicted RBP11.81□□□□□ -0.52
SYNE2-215ENST00000554997 TRIM22Q8IYM9 498 aa11.81□□□□□ -0.52
SYNE2-215ENST00000554997 NSUN7Q8NE18 718 aaKnown RBP11.81□□□□□ -0.52
SYNE2-215ENST00000554997 REPS2Q8NFH8 660 aa11.81□□□□□ -0.52
SYNE2-215ENST00000554997 SMARCC2Q8TAQ2 1214 aa11.81□□□□□ -0.52
SYNE2-215ENST00000554997 SMCR8Q8TEV9 937 aaPredicted RBP11.81□□□□□ -0.52
SYNE2-215ENST00000554997 PHKBQ93100 1093 aa11.81□□□□□ -0.52
SYNE2-215ENST00000554997 PIGSQ96S52 555 aa11.81□□□□□ -0.52
SYNE2-215ENST00000554997 CFHR5Q9BXR6 569 aa11.81□□□□□ -0.52
SYNE2-215ENST00000554997 RNF186Q9NXI6 227 aa11.81□□□□□ -0.52
SYNE2-215ENST00000554997 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.81□□□□□ -0.52
SYNE2-215ENST00000554997 CTDP1Q9Y5B0 961 aaPredicted RBP11.81□□□□□ -0.52
SYNE2-215ENST00000554997 ICAM1P05362 532 aa11.8□□□□□ -0.52
SYNE2-215ENST00000554997 FDPSP14324 419 aaKnown RBP11.8□□□□□ -0.52
SYNE2-215ENST00000554997 STAT3P40763 770 aa11.8□□□□□ -0.52
SYNE2-215ENST00000554997 SNAP25P60880 206 aa11.8□□□□□ -0.52
SYNE2-215ENST00000554997 TMEM132BQ14DG7 1078 aa11.8□□□□□ -0.52
SYNE2-215ENST00000554997 PKN1Q16512 942 aa11.8□□□□□ -0.52
SYNE2-215ENST00000554997 CDC37Q16543 378 aaPredicted RBP11.8□□□□□ -0.52
SYNE2-215ENST00000554997 QRICH1Q2TAL8 776 aa11.8□□□□□ -0.52
SYNE2-215ENST00000554997 Q3C1V9 767 aa11.8□□□□□ -0.52
SYNE2-215ENST00000554997 C17orf99Q6UX52 265 aa11.8□□□□□ -0.52
SYNE2-215ENST00000554997 GPRC5AQ8NFJ5 357 aa11.8□□□□□ -0.52
SYNE2-215ENST00000554997 AMNQ9BXJ7 453 aa11.8□□□□□ -0.52
SYNE2-215ENST00000554997 SLC26A6Q9BXS9 759 aa11.8□□□□□ -0.52
SYNE2-215ENST00000554997 BTBD7Q9P203 1132 aa11.8□□□□□ -0.52
SYNE2-215ENST00000554997 MORF4L1Q9UBU8 362 aa11.8□□□□□ -0.52
SYNE2-215ENST00000554997 SEC63Q9UGP8 760 aaKnown RBP11.8□□□□□ -0.52
SYNE2-215ENST00000554997 ZNF536O15090 1300 aa11.8□□□□□ -0.52
SYNE2-215ENST00000554997 MYH4Q9Y623 1939 aa11.8□□□□□ -0.52
SYNE2-215ENST00000554997 hCG_1642624A0A1W2PR95 340 aa11.79□□□□□ -0.52
SYNE2-215ENST00000554997 PTPDC1A2A3K4 754 aa11.79□□□□□ -0.52
SYNE2-215ENST00000554997 TRPA1O75762 1119 aa11.79□□□□□ -0.52
SYNE2-215ENST00000554997 CNMDO75829 334 aa11.79□□□□□ -0.52
SYNE2-215ENST00000554997 DEXIO95424 95 aa11.79□□□□□ -0.52
SYNE2-215ENST00000554997 ANP32AP39687 249 aaKnown RBP11.79□□□□□ -0.52
SYNE2-215ENST00000554997 HMGN5P82970 282 aaKnown RBP11.79□□□□□ -0.52
SYNE2-215ENST00000554997 CRHR2Q13324 411 aa11.79□□□□□ -0.52
SYNE2-215ENST00000554997 PFKFB3Q16875 520 aaPredicted RBP11.79□□□□□ -0.52
SYNE2-215ENST00000554997 FBXO11Q86XK2 927 aa11.79□□□□□ -0.52
SYNE2-215ENST00000554997 HOMER1Q86YM7 354 aa11.79□□□□□ -0.52
SYNE2-215ENST00000554997 CPXCR1Q8N123 301 aa11.79□□□□□ -0.52
SYNE2-215ENST00000554997 ANKRD13CQ8N6S4 541 aa11.79□□□□□ -0.52
SYNE2-215ENST00000554997 PIBF1Q8WXW3 757 aa11.79□□□□□ -0.52
SYNE2-215ENST00000554997 WASF1Q92558 559 aa11.79□□□□□ -0.52
SYNE2-215ENST00000554997 AGBL1Q96MI9 1066 aa11.79□□□□□ -0.52
SYNE2-215ENST00000554997 RAVER2Q9HCJ3 691 aaKnown RBP11.79□□□□□ -0.52
SYNE2-215ENST00000554997 TXNRD2Q9NNW7 524 aa11.79□□□□□ -0.52
SYNE2-215ENST00000554997 SAGE1Q9NXZ1 904 aa11.79□□□□□ -0.52
SYNE2-215ENST00000554997 ORC3Q9UBD5 711 aaPredicted RBP11.79□□□□□ -0.52
SYNE2-215ENST00000554997 ZNF214Q9UL59 606 aaPredicted RBP11.79□□□□□ -0.52
SYNE2-215ENST00000554997 CNTNAP5Q8WYK1 1306 aa11.79□□□□□ -0.52
SYNE2-215ENST00000554997 STK36Q9NRP7 1315 aa11.79□□□□□ -0.52
SYNE2-215ENST00000554997 LOC285556D6RIA3 1793 aa11.78□□□□□ -0.52
SYNE2-215ENST00000554997 hCG_1984214I3L0E3 225 aa11.78□□□□□ -0.52
SYNE2-215ENST00000554997 JAK2O60674 1132 aa11.78□□□□□ -0.52
SYNE2-215ENST00000554997 PPP1R11O60927 126 aaPredicted RBP11.78□□□□□ -0.52
SYNE2-215ENST00000554997 PPFIA3O75145 1194 aa11.78□□□□□ -0.52
SYNE2-215ENST00000554997 TBC1D8O95759 1140 aa11.78□□□□□ -0.52
SYNE2-215ENST00000554997 SLC25A27O95847 323 aa11.78□□□□□ -0.52
SYNE2-215ENST00000554997 SCG2P13521 617 aa11.78□□□□□ -0.52
SYNE2-215ENST00000554997 TKFCQ3LXA3 575 aa11.78□□□□□ -0.52
SYNE2-215ENST00000554997 CCDC174Q6PII3 467 aa11.78□□□□□ -0.52
SYNE2-215ENST00000554997 ZNF713Q8N859 430 aaPredicted RBP11.78□□□□□ -0.52
SYNE2-215ENST00000554997 TEX13BQ9BXU2 312 aa11.78□□□□□ -0.52
SYNE2-215ENST00000554997 SPATC1LQ9H0A9 340 aa11.78□□□□□ -0.52
SYNE2-215ENST00000554997 SH3GLB2Q9NR46 395 aa11.78□□□□□ -0.52
SYNE2-215ENST00000554997 WBP1LQ9NX94 342 aa11.78□□□□□ -0.52
SYNE2-215ENST00000554997 PCDHA1Q9Y5I3 950 aa11.78□□□□□ -0.52
SYNE2-215ENST00000554997 ADGRA2Q96PE1 1338 aa11.78□□□□□ -0.52
SYNE2-215ENST00000554997 PEX10O60683 326 aa11.77□□□□□ -0.53
SYNE2-215ENST00000554997 BCRP11274 1271 aa11.77□□□□□ -0.53
SYNE2-215ENST00000554997 COPB2P35606 906 aa11.77□□□□□ -0.53
SYNE2-215ENST00000554997 ERVK-9P63128 1117 aa11.77□□□□□ -0.53
SYNE2-215ENST00000554997 ERVK-24P63145 666 aa11.77□□□□□ -0.53
SYNE2-215ENST00000554997 CCNA1P78396 465 aa11.77□□□□□ -0.53
SYNE2-215ENST00000554997 PLS1Q14651 629 aa11.77□□□□□ -0.53
SYNE2-215ENST00000554997 FAM110CQ1W6H9 321 aa11.77□□□□□ -0.53
SYNE2-215ENST00000554997 SNRNP48Q6IEG0 339 aaKnown RBP11.77□□□□□ -0.53
SYNE2-215ENST00000554997 RIOX2Q8IUF8 465 aa11.77□□□□□ -0.53
SYNE2-215ENST00000554997 FAM177A1Q8N128 213 aaPredicted RBP11.77□□□□□ -0.53
SYNE2-215ENST00000554997 RGS22Q8NE09 1264 aa11.77□□□□□ -0.53
SYNE2-215ENST00000554997 COA7Q96BR5 231 aa11.77□□□□□ -0.53
SYNE2-215ENST00000554997 DDX11Q96FC9 970 aa11.77□□□□□ -0.53
SYNE2-215ENST00000554997 PAGR1Q9BTK6 254 aa11.77□□□□□ -0.53
SYNE2-215ENST00000554997 BEGAINQ9BUH8 593 aa11.77□□□□□ -0.53
SYNE2-215ENST00000554997 MOV10L1Q9BXT6 1211 aaKnown RBP11.77□□□□□ -0.53
SYNE2-215ENST00000554997 MAF1Q9H063 256 aa11.77□□□□□ -0.53
SYNE2-215ENST00000554997 R3HDMLQ9H3Y0 253 aa11.77□□□□□ -0.53
SYNE2-215ENST00000554997 MROH8Q9H579 483 aa11.77□□□□□ -0.53
SYNE2-215ENST00000554997 BARHL2Q9NY43 387 aa11.77□□□□□ -0.53
SYNE2-215ENST00000554997 CPA4Q9UI42 421 aa11.77□□□□□ -0.53
SYNE2-215ENST00000554997 CCPG1Q9ULG6 757 aa11.77□□□□□ -0.53
SYNE2-215ENST00000554997 SMC3Q9UQE7 1217 aa11.77□□□□□ -0.53
SYNE2-215ENST00000554997 RIPK3Q9Y572 518 aa11.77□□□□□ -0.53
SYNE2-215ENST00000554997 THSD7BQ9C0I4 1608 aa11.77□□□□□ -0.53
SYNE2-215ENST00000554997 DTNBO60941 627 aa11.76□□□□□ -0.53
SYNE2-215ENST00000554997 HSP90AA1P07900 732 aaKnown RBP11.76□□□□□ -0.53
SYNE2-215ENST00000554997 XBP1P17861 261 aa11.76□□□□□ -0.53
SYNE2-215ENST00000554997 GJB2P29033 226 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms