RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 ICAM1P05362 532 aa19.04■□□□□ 0.64
SPTLC2-203ENST00000554901 BCRP11274 1271 aa19.04■□□□□ 0.64
SPTLC2-203ENST00000554901 COPB2P35606 906 aa19.04■□□□□ 0.64
SPTLC2-203ENST00000554901 AKAP17AQ02040 695 aaKnown RBP19.04■□□□□ 0.64
SPTLC2-203ENST00000554901 NOM1Q5C9Z4 860 aaKnown RBP19.04■□□□□ 0.64
SPTLC2-203ENST00000554901 POTEEQ6S8J3 1075 aa19.04■□□□□ 0.64
SPTLC2-203ENST00000554901 CMTR1Q8N1G2 835 aaKnown RBP19.04■□□□□ 0.64
SPTLC2-203ENST00000554901 CCDC82Q8N4S0 544 aa19.04■□□□□ 0.64
SPTLC2-203ENST00000554901 GPRC5AQ8NFJ5 357 aa19.04■□□□□ 0.64
SPTLC2-203ENST00000554901 TEX13BQ9BXU2 312 aa19.04■□□□□ 0.64
SPTLC2-203ENST00000554901 WBP1LQ9NX94 342 aa19.04■□□□□ 0.64
SPTLC2-203ENST00000554901 STK36Q9NRP7 1315 aa19.03■□□□□ 0.64
SPTLC2-203ENST00000554901 hCG_1984214I3L0E3 225 aa19.03■□□□□ 0.64
SPTLC2-203ENST00000554901 TRPA1O75762 1119 aa19.03■□□□□ 0.64
SPTLC2-203ENST00000554901 FMNL1O95466 1100 aaPredicted RBP19.03■□□□□ 0.64
SPTLC2-203ENST00000554901 ERVK-9P63128 1117 aa19.03■□□□□ 0.64
SPTLC2-203ENST00000554901 ERVK-24P63145 666 aa19.03■□□□□ 0.64
SPTLC2-203ENST00000554901 CCNA1P78396 465 aa19.03■□□□□ 0.64
SPTLC2-203ENST00000554901 SSRP1Q08945 709 aaKnown RBP19.03■□□□□ 0.64
SPTLC2-203ENST00000554901 CUL4AQ13619 759 aa19.03■□□□□ 0.64
SPTLC2-203ENST00000554901 TMEM132BQ14DG7 1078 aa19.03■□□□□ 0.64
SPTLC2-203ENST00000554901 QRICH1Q2TAL8 776 aa19.03■□□□□ 0.64
SPTLC2-203ENST00000554901 CCDC83Q8IWF9 413 aa19.03■□□□□ 0.64
SPTLC2-203ENST00000554901 ZNF713Q8N859 430 aaPredicted RBP19.03■□□□□ 0.64
SPTLC2-203ENST00000554901 PIGSQ96S52 555 aa19.03■□□□□ 0.64
SPTLC2-203ENST00000554901 BTBD7Q9P203 1132 aa19.03■□□□□ 0.64
SPTLC2-203ENST00000554901 V9GY48 417 aaPredicted RBP19.03■□□□□ 0.64
SPTLC2-203ENST00000554901 ZNF536O15090 1300 aa19.03■□□□□ 0.64
SPTLC2-203ENST00000554901 CNMDO75829 334 aa19.02■□□□□ 0.64
SPTLC2-203ENST00000554901 SLC25A27O95847 323 aa19.02■□□□□ 0.64
SPTLC2-203ENST00000554901 STAT3P40763 770 aa19.02■□□□□ 0.64
SPTLC2-203ENST00000554901 ST3GAL1Q11201 340 aa19.02■□□□□ 0.64
SPTLC2-203ENST00000554901 TKFCQ3LXA3 575 aa19.02■□□□□ 0.64
SPTLC2-203ENST00000554901 HOMER1Q86YM7 354 aa19.02■□□□□ 0.64
SPTLC2-203ENST00000554901 ANKRD13CQ8N6S4 541 aa19.02■□□□□ 0.64
SPTLC2-203ENST00000554901 NSUN7Q8NE18 718 aaKnown RBP19.02■□□□□ 0.64
SPTLC2-203ENST00000554901 SHCBP1Q8NEM2 672 aa19.02■□□□□ 0.64
SPTLC2-203ENST00000554901 PAGR1Q9BTK6 254 aa19.02■□□□□ 0.64
SPTLC2-203ENST00000554901 AMNQ9BXJ7 453 aa19.02■□□□□ 0.64
SPTLC2-203ENST00000554901 SPATC1LQ9H0A9 340 aa19.02■□□□□ 0.64
SPTLC2-203ENST00000554901 TXNRD2Q9NNW7 524 aa19.02■□□□□ 0.64
SPTLC2-203ENST00000554901 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.02■□□□□ 0.64
SPTLC2-203ENST00000554901 CEP350Q5VT06 3117 aa19.01■□□□□ 0.63
SPTLC2-203ENST00000554901 DEXIO95424 95 aa19.01■□□□□ 0.63
SPTLC2-203ENST00000554901 CTDNEP1O95476 244 aa19.01■□□□□ 0.63
SPTLC2-203ENST00000554901 HMGN5P82970 282 aaKnown RBP19.01■□□□□ 0.63
SPTLC2-203ENST00000554901 BECN1Q14457 450 aa19.01■□□□□ 0.63
SPTLC2-203ENST00000554901 FBXO11Q86XK2 927 aa19.01■□□□□ 0.63
SPTLC2-203ENST00000554901 RIOX2Q8IUF8 465 aa19.01■□□□□ 0.63
SPTLC2-203ENST00000554901 FAM177A1Q8N128 213 aaPredicted RBP19.01■□□□□ 0.63
SPTLC2-203ENST00000554901 PHKBQ93100 1093 aa19.01■□□□□ 0.63
SPTLC2-203ENST00000554901 INTS4Q96HW7 963 aaKnown RBP19.01■□□□□ 0.63
SPTLC2-203ENST00000554901 SLC26A6Q9BXS9 759 aa19.01■□□□□ 0.63
SPTLC2-203ENST00000554901 MAF1Q9H063 256 aa19.01■□□□□ 0.63
SPTLC2-203ENST00000554901 PFKFB3Q16875 520 aaPredicted RBP19■□□□□ 0.63
SPTLC2-203ENST00000554901 SNRNP48Q6IEG0 339 aaKnown RBP19■□□□□ 0.63
SPTLC2-203ENST00000554901 CCDC174Q6PII3 467 aa19■□□□□ 0.63
SPTLC2-203ENST00000554901 CPXCR1Q8N123 301 aa19■□□□□ 0.63
SPTLC2-203ENST00000554901 SMARCC2Q8TAQ2 1214 aa19■□□□□ 0.63
SPTLC2-203ENST00000554901 WASF1Q92558 559 aa19■□□□□ 0.63
SPTLC2-203ENST00000554901 RAVER2Q9HCJ3 691 aaKnown RBP19■□□□□ 0.63
SPTLC2-203ENST00000554901 CPA4Q9UI42 421 aa19■□□□□ 0.63
SPTLC2-203ENST00000554901 CCPG1Q9ULG6 757 aa19■□□□□ 0.63
SPTLC2-203ENST00000554901 SCG2P13521 617 aa19■□□□□ 0.63
SPTLC2-203ENST00000554901 TEX2Q8IWB9 1127 aa19■□□□□ 0.63
SPTLC2-203ENST00000554901 MROH8Q9H579 483 aa19■□□□□ 0.63
SPTLC2-203ENST00000554901 FBXO40Q9UH90 709 aa19■□□□□ 0.63
SPTLC2-203ENST00000554901 ABCB11O95342 1321 aa18.99■□□□□ 0.63
SPTLC2-203ENST00000554901 BAZ2BQ9UIF8 2168 aaKnown RBP18.99■□□□□ 0.63
SPTLC2-203ENST00000554901 PTPDC1A2A3K4 754 aa18.99■□□□□ 0.63
SPTLC2-203ENST00000554901 TBC1D8O95759 1140 aa18.99■□□□□ 0.63
SPTLC2-203ENST00000554901 SNAP25P60880 206 aa18.99■□□□□ 0.63
SPTLC2-203ENST00000554901 PLS1Q14651 629 aa18.99■□□□□ 0.63
SPTLC2-203ENST00000554901 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.99■□□□□ 0.63
SPTLC2-203ENST00000554901 CHST13Q8NET6 341 aa18.99■□□□□ 0.63
SPTLC2-203ENST00000554901 AGBL1Q96MI9 1066 aa18.99■□□□□ 0.63
SPTLC2-203ENST00000554901 MOV10L1Q9BXT6 1211 aaKnown RBP18.99■□□□□ 0.63
SPTLC2-203ENST00000554901 ORC3Q9UBD5 711 aaPredicted RBP18.99■□□□□ 0.63
SPTLC2-203ENST00000554901 KIF3AQ9Y496 699 aa18.99■□□□□ 0.63
SPTLC2-203ENST00000554901 PCDHA1Q9Y5I3 950 aa18.99■□□□□ 0.63
SPTLC2-203ENST00000554901 PPP1R11O60927 126 aaPredicted RBP18.98■□□□□ 0.63
SPTLC2-203ENST00000554901 MAPK4P31152 587 aa18.98■□□□□ 0.63
SPTLC2-203ENST00000554901 PKN1Q16512 942 aa18.98■□□□□ 0.63
SPTLC2-203ENST00000554901 Q3C1V9 767 aa18.98■□□□□ 0.63
SPTLC2-203ENST00000554901 PPP1R18Q6NYC8 613 aa18.98■□□□□ 0.63
SPTLC2-203ENST00000554901 R3HDMLQ9H3Y0 253 aa18.98■□□□□ 0.63
SPTLC2-203ENST00000554901 SH3GLB2Q9NR46 395 aa18.98■□□□□ 0.63
SPTLC2-203ENST00000554901 BARHL2Q9NY43 387 aa18.98■□□□□ 0.63
SPTLC2-203ENST00000554901 MRPL11Q9Y3B7 192 aaKnown RBP18.98■□□□□ 0.63
SPTLC2-203ENST00000554901 COL11A1P12107 1806 aaPredicted RBP18.98■□□□□ 0.63
SPTLC2-203ENST00000554901 ANP32AP39687 249 aaKnown RBP18.97■□□□□ 0.63
SPTLC2-203ENST00000554901 CCAR1Q8IX12 1150 aaKnown RBP18.97■□□□□ 0.63
SPTLC2-203ENST00000554901 SAMD3Q8N6K7 520 aa18.97■□□□□ 0.63
SPTLC2-203ENST00000554901 CCDC12Q8WUD4 166 aaPredicted RBP18.97■□□□□ 0.63
SPTLC2-203ENST00000554901 PIBF1Q8WXW3 757 aa18.97■□□□□ 0.63
SPTLC2-203ENST00000554901 TSHZ2Q9NRE2 1034 aa18.97■□□□□ 0.63
SPTLC2-203ENST00000554901 GPR25O00155 361 aa18.96■□□□□ 0.63
SPTLC2-203ENST00000554901 ALAS1P13196 640 aa18.96■□□□□ 0.63
SPTLC2-203ENST00000554901 XBP1P17861 261 aa18.96■□□□□ 0.63
SPTLC2-203ENST00000554901 SP3Q02447 781 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms