RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 AGBL1Q96MI9 1066 aa12.51□□□□□ -0.41
SHMT2-213ENST00000554600 RNF146Q9NTX7 359 aa12.51□□□□□ -0.41
SHMT2-213ENST00000554600 ZSWIM5Q9P217 1185 aa12.51□□□□□ -0.41
SHMT2-213ENST00000554600 CCPG1Q9ULG6 757 aa12.51□□□□□ -0.41
SHMT2-213ENST00000554600 RBM8AQ9Y5S9 174 aaKnown RBP12.51□□□□□ -0.41
SHMT2-213ENST00000554600 TNKSO95271 1327 aa12.51□□□□□ -0.41
SHMT2-213ENST00000554600 A0A0C4DFX4 3053 aa12.51□□□□□ -0.41
SHMT2-213ENST00000554600 MYCNP04198 464 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-213ENST00000554600 CYP21A2P08686 494 aa12.5□□□□□ -0.41
SHMT2-213ENST00000554600 GOLGA8HP0CJ92 632 aa12.5□□□□□ -0.41
SHMT2-213ENST00000554600 ZNF543Q08ER8 600 aa12.5□□□□□ -0.41
SHMT2-213ENST00000554600 BMP2KLQ5H9B9 411 aa12.5□□□□□ -0.41
SHMT2-213ENST00000554600 PRAMEF19Q5SWL8 479 aa12.5□□□□□ -0.41
SHMT2-213ENST00000554600 IFIT1BQ5T764 474 aaKnown RBP12.5□□□□□ -0.41
SHMT2-213ENST00000554600 ANO1Q5XXA6 986 aa12.5□□□□□ -0.41
SHMT2-213ENST00000554600 CASC1Q6TDU7 716 aa12.5□□□□□ -0.41
SHMT2-213ENST00000554600 NECAB2Q7Z6G3 386 aa12.5□□□□□ -0.41
SHMT2-213ENST00000554600 ENAHQ8N8S7 591 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-213ENST00000554600 DIS3LQ8TF46 1054 aaKnown RBP12.5□□□□□ -0.41
SHMT2-213ENST00000554600 TRERF1Q96PN7 1200 aa12.5□□□□□ -0.41
SHMT2-213ENST00000554600 ESYT1Q9BSJ8 1104 aa12.5□□□□□ -0.41
SHMT2-213ENST00000554600 ACAD9Q9H845 621 aa12.5□□□□□ -0.41
SHMT2-213ENST00000554600 ZNF536O15090 1300 aa12.49□□□□□ -0.41
SHMT2-213ENST00000554600 ERICH2A1L162 156 aa12.49□□□□□ -0.41
SHMT2-213ENST00000554600 DHX16O60231 1041 aaKnown RBP12.49□□□□□ -0.41
SHMT2-213ENST00000554600 CYBAP13498 195 aa12.49□□□□□ -0.41
SHMT2-213ENST00000554600 ZNF792Q3KQV3 632 aa12.49□□□□□ -0.41
SHMT2-213ENST00000554600 TKFCQ3LXA3 575 aa12.49□□□□□ -0.41
SHMT2-213ENST00000554600 CYB5R4Q7L1T6 521 aa12.49□□□□□ -0.41
SHMT2-213ENST00000554600 ANKLE1Q8NAG6 615 aa12.49□□□□□ -0.41
SHMT2-213ENST00000554600 TRPV1Q8NER1 839 aa12.49□□□□□ -0.41
SHMT2-213ENST00000554600 NCOA7Q8NI08 942 aa12.49□□□□□ -0.41
SHMT2-213ENST00000554600 TINF2Q9BSI4 451 aa12.49□□□□□ -0.41
SHMT2-213ENST00000554600 ANO2Q9NQ90 1003 aa12.49□□□□□ -0.41
SHMT2-213ENST00000554600 DDX20Q9UHI6 824 aaKnown RBP12.49□□□□□ -0.41
SHMT2-213ENST00000554600 OGDHLQ9ULD0 1010 aa12.49□□□□□ -0.41
SHMT2-213ENST00000554600 TRIOBPQ9H2D6 2365 aa12.49□□□□□ -0.41
SHMT2-213ENST00000554600 MKI67P46013 3256 aaKnown RBP12.49□□□□□ -0.41
SHMT2-213ENST00000554600 E7EWF7 191 aa12.48□□□□□ -0.41
SHMT2-213ENST00000554600 POTEB2H3BUK9 544 aa12.48□□□□□ -0.41
SHMT2-213ENST00000554600 IFIT3O14879 490 aaKnown RBP12.48□□□□□ -0.41
SHMT2-213ENST00000554600 MSCO60682 206 aa12.48□□□□□ -0.41
SHMT2-213ENST00000554600 TAL1P17542 331 aaPredicted RBP12.48□□□□□ -0.41
SHMT2-213ENST00000554600 GPATCH4Q5T3I0 446 aaKnown RBP12.48□□□□□ -0.41
SHMT2-213ENST00000554600 BTNL9Q6UXG8 535 aa12.48□□□□□ -0.41
SHMT2-213ENST00000554600 NSMFQ6X4W1 530 aa12.48□□□□□ -0.41
SHMT2-213ENST00000554600 MAP4K1Q92918 833 aa12.48□□□□□ -0.41
SHMT2-213ENST00000554600 RANBP17Q9H2T7 1088 aaKnown RBP12.48□□□□□ -0.41
SHMT2-213ENST00000554600 CPVLQ9H3G5 476 aa12.48□□□□□ -0.41
SHMT2-213ENST00000554600 CNPY2Q9Y2B0 182 aa12.48□□□□□ -0.41
SHMT2-213ENST00000554600 DIS3Q9Y2L1 958 aaKnown RBP12.48□□□□□ -0.41
SHMT2-213ENST00000554600 CDC45O75419 566 aa12.47□□□□□ -0.41
SHMT2-213ENST00000554600 ICAM1P05362 532 aa12.47□□□□□ -0.41
SHMT2-213ENST00000554600 PARP1P09874 1014 aaKnown RBP12.47□□□□□ -0.41
SHMT2-213ENST00000554600 SNHG28P0DPA3 235 aa12.47□□□□□ -0.41
SHMT2-213ENST00000554600 SART3Q15020 963 aaKnown RBP12.47□□□□□ -0.41
SHMT2-213ENST00000554600 LHX8Q68G74 356 aa12.47□□□□□ -0.41
SHMT2-213ENST00000554600 CHST3Q7LGC8 479 aa12.47□□□□□ -0.41
SHMT2-213ENST00000554600 UBE2Q1Q7Z7E8 422 aa12.47□□□□□ -0.41
SHMT2-213ENST00000554600 ANKS1AQ92625 1134 aa12.47□□□□□ -0.41
SHMT2-213ENST00000554600 UBA5Q9GZZ9 404 aa12.47□□□□□ -0.41
SHMT2-213ENST00000554600 LSG1Q9H089 658 aaKnown RBP12.47□□□□□ -0.41
SHMT2-213ENST00000554600 C11orf49Q9H6J7 331 aa12.47□□□□□ -0.41
SHMT2-213ENST00000554600 ZHX1Q9UKY1 873 aaPredicted RBP12.47□□□□□ -0.41
SHMT2-213ENST00000554600 TAF6LQ9Y6J9 622 aa12.47□□□□□ -0.41
SHMT2-213ENST00000554600 MYH7BA7E2Y1 1941 aa12.47□□□□□ -0.41
SHMT2-213ENST00000554600 LRRC37A2A6NM11 1700 aa12.46□□□□□ -0.41
SHMT2-213ENST00000554600 PFASO15067 1338 aa12.46□□□□□ -0.41
SHMT2-213ENST00000554600 DNAJC25-GNG10A0A024R161 153 aa12.46□□□□□ -0.41
SHMT2-213ENST00000554600 SEPT4O43236 478 aa12.46□□□□□ -0.41
SHMT2-213ENST00000554600 EVI5O60447 810 aa12.46□□□□□ -0.41
SHMT2-213ENST00000554600 CNTN2Q02246 1040 aa12.46□□□□□ -0.41
SHMT2-213ENST00000554600 WTAPQ15007 396 aa12.46□□□□□ -0.41
SHMT2-213ENST00000554600 USH1GQ495M9 461 aa12.46□□□□□ -0.41
SHMT2-213ENST00000554600 ASPRV1Q53RT3 343 aa12.46□□□□□ -0.41
SHMT2-213ENST00000554600 MUM1L1Q5H9M0 696 aa12.46□□□□□ -0.41
SHMT2-213ENST00000554600 STOX1Q6ZVD7 989 aa12.46□□□□□ -0.41
SHMT2-213ENST00000554600 VAT1LQ9HCJ6 419 aa12.46□□□□□ -0.41
SHMT2-213ENST00000554600 A1CFQ9NQ94 594 aaKnown RBP12.46□□□□□ -0.41
SHMT2-213ENST00000554600 NR2E3Q9Y5X4 410 aa12.46□□□□□ -0.41
SHMT2-213ENST00000554600 KIAA1217Q5T5P2 1943 aa12.46□□□□□ -0.42
SHMT2-213ENST00000554600 SZT2Q5T011 3432 aa12.46□□□□□ -0.42
SHMT2-213ENST00000554600 PTPDC1A2A3K4 754 aa12.45□□□□□ -0.42
SHMT2-213ENST00000554600 H0YGN5 161 aa12.45□□□□□ -0.42
SHMT2-213ENST00000554600 SLC27A2O14975 620 aa12.45□□□□□ -0.42
SHMT2-213ENST00000554600 IGHA2P01877 340 aa12.45□□□□□ -0.42
SHMT2-213ENST00000554600 RARBP10826 455 aa12.45□□□□□ -0.42
SHMT2-213ENST00000554600 TMEM67Q5HYA8 995 aa12.45□□□□□ -0.42
SHMT2-213ENST00000554600 GJC2Q5T442 439 aaPredicted RBP12.45□□□□□ -0.42
SHMT2-213ENST00000554600 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.45□□□□□ -0.42
SHMT2-213ENST00000554600 ARRDC4Q8NCT1 418 aa12.45□□□□□ -0.42
SHMT2-213ENST00000554600 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.45□□□□□ -0.42
SHMT2-213ENST00000554600 PNMA2Q9UL42 364 aa12.45□□□□□ -0.42
SHMT2-213ENST00000554600 SYNGAP1Q96PV0 1343 aa12.44□□□□□ -0.42
SHMT2-213ENST00000554600 KBTBD13C9JR72 458 aa12.44□□□□□ -0.42
SHMT2-213ENST00000554600 AKR1A1P14550 325 aa12.44□□□□□ -0.42
SHMT2-213ENST00000554600 CALML3P27482 149 aa12.44□□□□□ -0.42
SHMT2-213ENST00000554600 MNX1P50219 401 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-213ENST00000554600 FXR1P51114 621 aaKnown RBP eCLIP12.44□□□□□ -0.42
SHMT2-213ENST00000554600 SEC23AQ15436 765 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms