RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 TMTC1Q8IUR5 882 aa16.39■□□□□ 0.21
ACTN1-211ENST00000553882 CCDC148Q8NFR7 591 aa16.39■□□□□ 0.21
ACTN1-211ENST00000553882 CCDC51Q96ER9 411 aa16.39■□□□□ 0.21
ACTN1-211ENST00000553882 NGLY1Q96IV0 654 aa16.39■□□□□ 0.21
ACTN1-211ENST00000553882 NAPAP54920 295 aa16.38■□□□□ 0.21
ACTN1-211ENST00000553882 CYP26C1Q6V0L0 522 aa16.38■□□□□ 0.21
ACTN1-211ENST00000553882 RABGGTAQ92696 567 aa16.38■□□□□ 0.21
ACTN1-211ENST00000553882 TRIM47Q96LD4 638 aa16.38■□□□□ 0.21
ACTN1-211ENST00000553882 TTC26A0AVF1 554 aa16.38■□□□□ 0.21
ACTN1-211ENST00000553882 ERICH4A6NGS2 130 aa16.38■□□□□ 0.21
ACTN1-211ENST00000553882 CCNT1O60563 726 aaKnown RBP16.38■□□□□ 0.21
ACTN1-211ENST00000553882 RFC4P35249 363 aa16.38■□□□□ 0.21
ACTN1-211ENST00000553882 TRIM10Q9UDY6 481 aa16.38■□□□□ 0.21
ACTN1-211ENST00000553882 TTF2Q9UNY4 1162 aaKnown RBP16.38■□□□□ 0.21
ACTN1-211ENST00000553882 MAST2Q6P0Q8 1798 aa16.37■□□□□ 0.21
ACTN1-211ENST00000553882 CTAGE9A4FU28 777 aa16.37■□□□□ 0.21
ACTN1-211ENST00000553882 PALM3A6NDB9 673 aaPredicted RBP16.37■□□□□ 0.21
ACTN1-211ENST00000553882 H7C1D1 291 aa16.37■□□□□ 0.21
ACTN1-211ENST00000553882 KLRC4O43908 158 aa16.37■□□□□ 0.21
ACTN1-211ENST00000553882 RC3H1Q5TC82 1133 aaKnown RBP16.37■□□□□ 0.21
ACTN1-211ENST00000553882 SRGAP1Q7Z6B7 1085 aa16.37■□□□□ 0.21
ACTN1-211ENST00000553882 ANKS1AQ92625 1134 aa16.37■□□□□ 0.21
ACTN1-211ENST00000553882 ARFGAP3Q9NP61 516 aa16.37■□□□□ 0.21
ACTN1-211ENST00000553882 CDC23Q9UJX2 597 aa16.37■□□□□ 0.21
ACTN1-211ENST00000553882 PLCG1P19174 1290 aa16.37■□□□□ 0.21
ACTN1-211ENST00000553882 BTDP43251 543 aa16.37■□□□□ 0.21
ACTN1-211ENST00000553882 GRAPQ13588 217 aa16.37■□□□□ 0.21
ACTN1-211ENST00000553882 TXNRD1Q16881 649 aa16.37■□□□□ 0.21
ACTN1-211ENST00000553882 GRAPLQ8TC17 118 aaPredicted RBP16.37■□□□□ 0.21
ACTN1-211ENST00000553882 EYA3Q99504 573 aa16.37■□□□□ 0.21
ACTN1-211ENST00000553882 TFR2Q9UP52 801 aa16.37■□□□□ 0.21
ACTN1-211ENST00000553882 TNRC6CQ9HCJ0 1690 aaKnown RBP16.37■□□□□ 0.21
ACTN1-211ENST00000553882 FECHP22830 423 aa16.36■□□□□ 0.21
ACTN1-211ENST00000553882 ZNF804AQ7Z570 1209 aa16.36■□□□□ 0.21
ACTN1-211ENST00000553882 RTFDC1Q9BY42 306 aaPredicted RBP16.36■□□□□ 0.21
ACTN1-211ENST00000553882 KBTBD4Q9NVX7 518 aa16.36■□□□□ 0.21
ACTN1-211ENST00000553882 PSMA7O14818 248 aa16.36■□□□□ 0.21
ACTN1-211ENST00000553882 ARHGAP25P42331 645 aa16.36■□□□□ 0.21
ACTN1-211ENST00000553882 CDK8P49336 464 aa16.36■□□□□ 0.21
ACTN1-211ENST00000553882 GSTO1P78417 241 aa16.36■□□□□ 0.21
ACTN1-211ENST00000553882 CCDC178Q5BJE1 867 aa16.36■□□□□ 0.21
ACTN1-211ENST00000553882 CNBD1Q8NA66 436 aa16.36■□□□□ 0.21
ACTN1-211ENST00000553882 ZCCHC17Q9NP64 241 aaKnown RBP16.36■□□□□ 0.21
ACTN1-211ENST00000553882 ROBO3Q96MS0 1386 aa16.36■□□□□ 0.21
ACTN1-211ENST00000553882 SMCO2A6NFE2 343 aa16.35■□□□□ 0.21
ACTN1-211ENST00000553882 B4DLN1 442 aa16.35■□□□□ 0.21
ACTN1-211ENST00000553882 TECP42680 631 aa16.35■□□□□ 0.21
ACTN1-211ENST00000553882 TRIM14Q14142 442 aa16.35■□□□□ 0.21
ACTN1-211ENST00000553882 CABP7Q86V35 215 aa16.35■□□□□ 0.21
ACTN1-211ENST00000553882 MB21D1Q8N884 522 aa16.35■□□□□ 0.21
ACTN1-211ENST00000553882 TCP11L1Q9NUJ3 509 aa16.35■□□□□ 0.21
ACTN1-211ENST00000553882 GUCA1BQ9UMX6 200 aa16.35■□□□□ 0.21
ACTN1-211ENST00000553882 LEMD3Q9Y2U8 911 aa16.35■□□□□ 0.21
ACTN1-211ENST00000553882 LGALS16A8MUM7 142 aa16.35■□□□□ 0.21
ACTN1-211ENST00000553882 UFL1O94874 794 aa16.35■□□□□ 0.21
ACTN1-211ENST00000553882 STIM1Q13586 685 aa16.35■□□□□ 0.21
ACTN1-211ENST00000553882 TEX11Q8IYF3 940 aa16.35■□□□□ 0.21
ACTN1-211ENST00000553882 DAGLBQ8NCG7 672 aa16.35■□□□□ 0.21
ACTN1-211ENST00000553882 GIMAP8Q8ND71 665 aaPredicted RBP16.35■□□□□ 0.21
ACTN1-211ENST00000553882 HPS3Q969F9 1004 aa16.35■□□□□ 0.21
ACTN1-211ENST00000553882 CCSER1Q9C0I3 900 aa16.35■□□□□ 0.21
ACTN1-211ENST00000553882 UBA5Q9GZZ9 404 aa16.35■□□□□ 0.21
ACTN1-211ENST00000553882 FLT1P17948 1338 aa16.34■□□□□ 0.21
ACTN1-211ENST00000553882 RGL2O15211 777 aa16.34■□□□□ 0.21
ACTN1-211ENST00000553882 RHOBTB3O94955 611 aa16.34■□□□□ 0.21
ACTN1-211ENST00000553882 NDUFA10O95299 355 aa16.34■□□□□ 0.21
ACTN1-211ENST00000553882 PPP4CP60510 307 aa16.34■□□□□ 0.21
ACTN1-211ENST00000553882 CSGALNACT2Q8N6G5 542 aa16.34■□□□□ 0.21
ACTN1-211ENST00000553882 CEP95Q96GE4 821 aa16.34■□□□□ 0.21
ACTN1-211ENST00000553882 NAPGQ99747 312 aaPredicted RBP16.34■□□□□ 0.21
ACTN1-211ENST00000553882 ZMYND12Q9H0C1 365 aa16.34■□□□□ 0.21
ACTN1-211ENST00000553882 ANKZF1Q9H8Y5 726 aa16.34■□□□□ 0.21
ACTN1-211ENST00000553882 LUC7L2Q9Y383 392 aaKnown RBP16.34■□□□□ 0.21
ACTN1-211ENST00000553882 REXO2Q9Y3B8 237 aaKnown RBP16.34■□□□□ 0.21
ACTN1-211ENST00000553882 EPN1Q9Y6I3 576 aaPredicted RBP16.34■□□□□ 0.21
ACTN1-211ENST00000553882 COL24A1Q17RW2 1714 aa16.34■□□□□ 0.21
ACTN1-211ENST00000553882 OR52Z1P0C646 297 aa16.34■□□□□ 0.21
ACTN1-211ENST00000553882 RHOXF2BP0C7M4 288 aa16.34■□□□□ 0.21
ACTN1-211ENST00000553882 FCER1AP12319 257 aa16.34■□□□□ 0.21
ACTN1-211ENST00000553882 KLK7P49862 253 aa16.34■□□□□ 0.21
ACTN1-211ENST00000553882 ASIC1P78348 528 aa16.34■□□□□ 0.21
ACTN1-211ENST00000553882 GPSM2P81274 684 aa16.34■□□□□ 0.21
ACTN1-211ENST00000553882 STK4Q13043 487 aa16.34■□□□□ 0.21
ACTN1-211ENST00000553882 KCNB1Q14721 858 aa16.34■□□□□ 0.21
ACTN1-211ENST00000553882 JAKMIP3Q5VZ66 844 aa16.34■□□□□ 0.21
ACTN1-211ENST00000553882 GALNT17Q6IS24 598 aa16.34■□□□□ 0.21
ACTN1-211ENST00000553882 TTI2Q6NXR4 508 aa16.34■□□□□ 0.21
ACTN1-211ENST00000553882 OR8K1Q8NGG5 319 aa16.34■□□□□ 0.21
ACTN1-211ENST00000553882 PIGSQ96S52 555 aa16.34■□□□□ 0.21
ACTN1-211ENST00000553882 RHOXF2Q9BQY4 288 aa16.34■□□□□ 0.21
ACTN1-211ENST00000553882 MAGEC2Q9UBF1 373 aaPredicted RBP16.34■□□□□ 0.21
ACTN1-211ENST00000553882 BIN2Q9UBW5 565 aaPredicted RBP16.34■□□□□ 0.21
ACTN1-211ENST00000553882 LDHCP07864 332 aa16.33■□□□□ 0.21
ACTN1-211ENST00000553882 PDE4DQ08499 809 aa16.33■□□□□ 0.21
ACTN1-211ENST00000553882 NONOQ15233 471 aaKnown RBP eCLIP16.33■□□□□ 0.21
ACTN1-211ENST00000553882 CEP112Q8N8E3 955 aa16.33■□□□□ 0.21
ACTN1-211ENST00000553882 PNKPQ96T60 521 aa16.33■□□□□ 0.21
ACTN1-211ENST00000553882 AGPAT5Q9NUQ2 364 aa16.33■□□□□ 0.21
ACTN1-211ENST00000553882 SBF2Q86WG5 1849 aa16.33■□□□□ 0.21
ACTN1-211ENST00000553882 ENC1O14682 589 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms